Corynebacterium matruchotii ATCC 14266

Taxonomy: cellular organisms; Bacteria; Terrabacteria group; Actinobacteria; Actinomycetia; Corynebacteriales; Corynebacteriaceae; Corynebacterium; Corynebacterium matruchotii

Average proteome isoelectric point is 6.24

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 2619 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|E0DH52|E0DH52_9CORY Heavy metal-associated domain protein OS=Corynebacterium matruchotii ATCC 14266 OX=553207 GN=HMPREF0299_5004 PE=4 SV=1
MM1 pKa = 7.83AYY3 pKa = 10.23SIYY6 pKa = 11.09NFLRR10 pKa = 11.84NTKK13 pKa = 9.98EE14 pKa = 3.54EE15 pKa = 4.22TKK17 pKa = 10.9ALDD20 pKa = 3.31QMASYY25 pKa = 9.88IHH27 pKa = 7.17HH28 pKa = 5.6NTDD31 pKa = 2.61MKK33 pKa = 11.28VYY35 pKa = 10.87LFLTLEE41 pKa = 4.26NYY43 pKa = 11.02AEE45 pKa = 4.2FEE47 pKa = 4.68AIQEE51 pKa = 4.36HH52 pKa = 5.08YY53 pKa = 9.86HH54 pKa = 6.19GRR56 pKa = 11.84VVWAVNAADD65 pKa = 3.9TGPFGALDD73 pKa = 4.26PYY75 pKa = 11.43SFDD78 pKa = 3.68GLVEE82 pKa = 4.2FDD84 pKa = 4.84GKK86 pKa = 10.63DD87 pKa = 3.27VDD89 pKa = 4.22IDD91 pKa = 3.78PGGAFYY97 pKa = 10.12STDD100 pKa = 3.52FSFDD104 pKa = 2.94GLAIMADD111 pKa = 3.04MVDD114 pKa = 4.04FPEE117 pKa = 4.32KK118 pKa = 10.12VKK120 pKa = 10.79EE121 pKa = 4.05VLVSDD126 pKa = 4.19AADD129 pKa = 3.73FPEE132 pKa = 5.25SFDD135 pKa = 5.32DD136 pKa = 3.83YY137 pKa = 11.65LLMVQEE143 pKa = 4.78QDD145 pKa = 4.58DD146 pKa = 4.41DD147 pKa = 4.43PDD149 pKa = 5.71PIEE152 pKa = 4.75AKK154 pKa = 10.48VLAAGALLVYY164 pKa = 10.27SLNISDD170 pKa = 4.1TVQGEE175 pKa = 4.67TPGEE179 pKa = 4.08LFLSEE184 pKa = 4.53SVCIGDD190 pKa = 3.69ARR192 pKa = 11.84GEE194 pKa = 3.83AFMYY198 pKa = 10.46QFFDD202 pKa = 4.27PNDD205 pKa = 3.58ADD207 pKa = 3.81RR208 pKa = 6.01

Molecular weight: 23.26 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|E0DHG3|E0DHG3_9CORY Uncharacterized protein OS=Corynebacterium matruchotii ATCC 14266 OX=553207 GN=HMPREF0299_5115 PE=4 SV=1
MM1 pKa = 7.46TKK3 pKa = 10.27GKK5 pKa = 8.73RR6 pKa = 11.84TFQPNNRR13 pKa = 11.84RR14 pKa = 11.84RR15 pKa = 11.84ARR17 pKa = 11.84KK18 pKa = 8.01HH19 pKa = 4.51GFRR22 pKa = 11.84IRR24 pKa = 11.84MRR26 pKa = 11.84TRR28 pKa = 11.84AGRR31 pKa = 11.84AIVAARR37 pKa = 11.84RR38 pKa = 11.84SKK40 pKa = 10.76GRR42 pKa = 11.84AKK44 pKa = 9.67LTAA47 pKa = 4.21

Molecular weight: 5.49 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

2619

0

2619

820278

29

3044

313.2

34.09

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

10.937 ± 0.063

0.824 ± 0.015

5.942 ± 0.042

5.498 ± 0.043

3.333 ± 0.028

7.826 ± 0.048

2.361 ± 0.023

5.608 ± 0.04

3.552 ± 0.046

9.423 ± 0.058

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.336 ± 0.022

3.245 ± 0.034

5.371 ± 0.041

3.611 ± 0.03

5.842 ± 0.047

5.733 ± 0.042

6.756 ± 0.043

7.934 ± 0.05

1.405 ± 0.019

2.463 ± 0.027
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski