Georgenia satyanarayanai

Taxonomy: cellular organisms; Bacteria; Terrabacteria group; Actinobacteria; Actinomycetia; Micrococcales; Bogoriellaceae; Georgenia

Average proteome isoelectric point is 6.0

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 3558 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A2Y9C4N5|A0A2Y9C4N5_9MICO ATP synthase subunit a OS=Georgenia satyanarayanai OX=860221 GN=atpB PE=3 SV=1
MM1 pKa = 7.72RR2 pKa = 11.84RR3 pKa = 11.84PGTTTTALACVVVLAACGGGTDD25 pKa = 5.13DD26 pKa = 5.76DD27 pKa = 4.6AAAPAPSSSSPAEE40 pKa = 4.04DD41 pKa = 3.65VNPVIDD47 pKa = 5.97DD48 pKa = 4.57DD49 pKa = 5.57FPDD52 pKa = 4.71PDD54 pKa = 3.76VLEE57 pKa = 4.34VDD59 pKa = 3.71GTYY62 pKa = 10.47YY63 pKa = 11.06AYY65 pKa = 8.92GTNGNLRR72 pKa = 11.84NVRR75 pKa = 11.84VARR78 pKa = 11.84STDD81 pKa = 3.45LEE83 pKa = 4.13EE84 pKa = 4.28WEE86 pKa = 4.66LLEE89 pKa = 5.87DD90 pKa = 4.86ALPDD94 pKa = 3.55LPRR97 pKa = 11.84WVIPGKK103 pKa = 8.03TWAPEE108 pKa = 3.84VTEE111 pKa = 5.24LDD113 pKa = 3.81DD114 pKa = 4.92GSYY117 pKa = 11.46ALYY120 pKa = 8.51FTATNYY126 pKa = 10.61DD127 pKa = 3.91PYY129 pKa = 9.94AQCVGVATADD139 pKa = 3.49APEE142 pKa = 4.71GPFTVVGEE150 pKa = 4.19EE151 pKa = 4.01MLVCPQEE158 pKa = 3.74QGGAIDD164 pKa = 4.9ASTFTDD170 pKa = 3.41TDD172 pKa = 3.4GTRR175 pKa = 11.84YY176 pKa = 10.34LLWKK180 pKa = 10.31NDD182 pKa = 3.19GNAVGVDD189 pKa = 3.55TWLHH193 pKa = 6.1LAPLAPDD200 pKa = 3.9GLSLTGEE207 pKa = 4.28PEE209 pKa = 3.96RR210 pKa = 11.84LLKK213 pKa = 9.92QDD215 pKa = 3.7QDD217 pKa = 3.79WEE219 pKa = 4.45GHH221 pKa = 5.32LVEE224 pKa = 5.74APTLVEE230 pKa = 3.96RR231 pKa = 11.84DD232 pKa = 3.35GTYY235 pKa = 11.23VLLYY239 pKa = 10.11SANDD243 pKa = 3.63YY244 pKa = 11.24GGEE247 pKa = 4.05QYY249 pKa = 11.5AVGYY253 pKa = 8.08ATADD257 pKa = 3.47AVAGPYY263 pKa = 8.94TKK265 pKa = 10.41ADD267 pKa = 3.87EE268 pKa = 4.64PLLTTDD274 pKa = 3.1ATDD277 pKa = 3.41GRR279 pKa = 11.84FIGPGGQDD287 pKa = 2.92VVTAPDD293 pKa = 3.49GTDD296 pKa = 2.43RR297 pKa = 11.84LVFHH301 pKa = 6.79SWYY304 pKa = 10.68GDD306 pKa = 3.11TSYY309 pKa = 11.09RR310 pKa = 11.84GVNVLPLEE318 pKa = 4.39WDD320 pKa = 3.34DD321 pKa = 3.64GRR323 pKa = 11.84PVVVVPP329 pKa = 4.85

Molecular weight: 35.23 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A2Y9AEU9|A0A2Y9AEU9_9MICO Protease HtpX homolog OS=Georgenia satyanarayanai OX=860221 GN=htpX PE=3 SV=1
MM1 pKa = 7.4GSVIKK6 pKa = 10.38KK7 pKa = 8.42RR8 pKa = 11.84RR9 pKa = 11.84KK10 pKa = 9.06RR11 pKa = 11.84MSKK14 pKa = 9.76KK15 pKa = 9.54KK16 pKa = 9.79HH17 pKa = 5.67RR18 pKa = 11.84KK19 pKa = 8.31LLRR22 pKa = 11.84KK23 pKa = 7.78TRR25 pKa = 11.84HH26 pKa = 3.65QRR28 pKa = 11.84RR29 pKa = 11.84NKK31 pKa = 9.78KK32 pKa = 9.85

Molecular weight: 4.1 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

3558

0

3558

1190508

24

2677

334.6

35.61

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

13.781 ± 0.068

0.532 ± 0.01

6.256 ± 0.043

6.222 ± 0.042

2.48 ± 0.024

9.44 ± 0.035

2.113 ± 0.021

3.038 ± 0.032

1.329 ± 0.024

10.438 ± 0.055

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

1.715 ± 0.016

1.598 ± 0.023

5.878 ± 0.039

2.733 ± 0.021

7.752 ± 0.051

4.947 ± 0.026

6.45 ± 0.034

9.93 ± 0.042

1.497 ± 0.016

1.872 ± 0.02
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski