Dictyobacter aurantiacus

Taxonomy: cellular organisms; Bacteria; Terrabacteria group; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Dictyobacteraceae; Dictyobacter

Average proteome isoelectric point is 6.43

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 7362 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A401ZJZ6|A0A401ZJZ6_9CHLR Histidine kinase OS=Dictyobacter aurantiacus OX=1936993 GN=KDAU_45050 PE=4 SV=1
MM1 pKa = 7.47SVTPSPTVVGVFRR14 pKa = 11.84DD15 pKa = 3.58RR16 pKa = 11.84SVVEE20 pKa = 3.74QVIEE24 pKa = 3.96ALYY27 pKa = 10.34QAGFAQDD34 pKa = 3.43QIRR37 pKa = 11.84YY38 pKa = 8.4SVPDD42 pKa = 3.45NTSGGFLNDD51 pKa = 3.7LKK53 pKa = 11.28HH54 pKa = 6.85LFTGPNASGSGDD66 pKa = 3.69LANDD70 pKa = 3.6LTGMGLTSEE79 pKa = 4.21QARR82 pKa = 11.84YY83 pKa = 8.5YY84 pKa = 10.86ANEE87 pKa = 3.92YY88 pKa = 11.07DD89 pKa = 3.49NGNIVMAVQALDD101 pKa = 3.88NEE103 pKa = 4.34QQAMNIFHH111 pKa = 6.51QFGAYY116 pKa = 9.98GIHH119 pKa = 5.22NTLRR123 pKa = 11.84EE124 pKa = 4.26AEE126 pKa = 4.38GMNEE130 pKa = 4.02DD131 pKa = 4.0AGYY134 pKa = 10.1AQPQTDD140 pKa = 4.15FNNPSAAYY148 pKa = 8.73AQQSTDD154 pKa = 3.46YY155 pKa = 8.91QHH157 pKa = 6.62QMSPYY162 pKa = 7.55TQHH165 pKa = 7.11PEE167 pKa = 4.64DD168 pKa = 4.63YY169 pKa = 9.34AQQPASSTWGNNAEE183 pKa = 4.51HH184 pKa = 6.24GQPLNEE190 pKa = 4.17EE191 pKa = 4.11TNPRR195 pKa = 11.84QEE197 pKa = 5.05AVTNDD202 pKa = 3.07QTAVHH207 pKa = 6.99EE208 pKa = 4.23YY209 pKa = 11.32ANDD212 pKa = 3.34NNYY215 pKa = 9.64TYY217 pKa = 11.27NDD219 pKa = 3.1NAAYY223 pKa = 10.98NNDD226 pKa = 2.8NTAYY230 pKa = 9.97NDD232 pKa = 3.46SNAEE236 pKa = 4.05YY237 pKa = 10.82NEE239 pKa = 3.81NNADD243 pKa = 3.63YY244 pKa = 10.17TEE246 pKa = 4.27QNSTVAPAGAADD258 pKa = 4.87QRR260 pKa = 11.84DD261 pKa = 4.31LPDD264 pKa = 4.28NIQPEE269 pKa = 4.77SVVDD273 pKa = 3.66HH274 pKa = 5.51QQNLPEE280 pKa = 4.51DD281 pKa = 3.79TTPIRR286 pKa = 11.84EE287 pKa = 3.93PSVSDD292 pKa = 3.25EE293 pKa = 4.35HH294 pKa = 8.38LNAPDD299 pKa = 4.28HH300 pKa = 6.42QDD302 pKa = 3.37QAAQDD307 pKa = 3.74YY308 pKa = 9.61RR309 pKa = 11.84SPEE312 pKa = 4.12TEE314 pKa = 4.73DD315 pKa = 5.3DD316 pKa = 3.75PTADD320 pKa = 3.62RR321 pKa = 11.84QDD323 pKa = 3.73YY324 pKa = 11.19NSADD328 pKa = 3.67NQGDD332 pKa = 3.49ITDD335 pKa = 3.93EE336 pKa = 4.14TTQPVGSDD344 pKa = 3.38DD345 pKa = 3.37RR346 pKa = 11.84AGAYY350 pKa = 7.78RR351 pKa = 11.84APATDD356 pKa = 4.26SDD358 pKa = 4.23TQNATSAPVIDD369 pKa = 4.45GANRR373 pKa = 11.84EE374 pKa = 4.22YY375 pKa = 9.41PTTVTYY381 pKa = 10.88DD382 pKa = 3.56EE383 pKa = 4.86TPGTPAADD391 pKa = 3.85NAPLDD396 pKa = 4.15AQPANAVDD404 pKa = 3.45NSTDD408 pKa = 3.32NTTSTAQHH416 pKa = 6.41TDD418 pKa = 2.82TFEE421 pKa = 3.9NAAYY425 pKa = 9.92QSPATHH431 pKa = 6.34NGEE434 pKa = 4.15VATLSTNYY442 pKa = 8.43NTEE445 pKa = 4.09PDD447 pKa = 3.51LSADD451 pKa = 3.18QGQIDD456 pKa = 4.22EE457 pKa = 5.47ADD459 pKa = 3.34HH460 pKa = 5.86QQYY463 pKa = 7.53QTAASTTEE471 pKa = 3.95NAPLDD476 pKa = 3.96QQQAPQDD483 pKa = 3.69ATAGTTATDD492 pKa = 4.33FAAQRR497 pKa = 11.84EE498 pKa = 4.27EE499 pKa = 4.44RR500 pKa = 11.84LRR502 pKa = 11.84QLQQRR507 pKa = 11.84LEE509 pKa = 4.16SAKK512 pKa = 10.2QRR514 pKa = 11.84LQDD517 pKa = 4.09SQTQLQAAKK526 pKa = 9.22EE527 pKa = 4.25HH528 pKa = 6.36EE529 pKa = 4.47SQLQSMKK536 pKa = 10.36QQLDD540 pKa = 3.79AIEE543 pKa = 5.32AEE545 pKa = 4.28LEE547 pKa = 4.13KK548 pKa = 11.41NEE550 pKa = 3.96AEE552 pKa = 4.55LRR554 pKa = 11.84EE555 pKa = 3.92THH557 pKa = 6.91ARR559 pKa = 11.84IEE561 pKa = 3.89QYY563 pKa = 10.78YY564 pKa = 10.14

Molecular weight: 61.99 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A401ZEE7|A0A401ZEE7_9CHLR Enterochelin esterase OS=Dictyobacter aurantiacus OX=1936993 GN=fes PE=4 SV=1
MM1 pKa = 7.35KK2 pKa = 9.45RR3 pKa = 11.84TWQPKK8 pKa = 8.26RR9 pKa = 11.84IPRR12 pKa = 11.84KK13 pKa = 9.21RR14 pKa = 11.84EE15 pKa = 3.41HH16 pKa = 7.15GFMKK20 pKa = 10.47RR21 pKa = 11.84MSTRR25 pKa = 11.84NGRR28 pKa = 11.84RR29 pKa = 11.84VLKK32 pKa = 10.49ARR34 pKa = 11.84RR35 pKa = 11.84AKK37 pKa = 10.41GRR39 pKa = 11.84WSLTVV44 pKa = 3.02

Molecular weight: 5.45 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

7362

0

7362

2368895

39

4032

321.8

35.71

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

9.439 ± 0.029

0.978 ± 0.009

4.904 ± 0.022

5.77 ± 0.036

3.612 ± 0.02

7.149 ± 0.026

2.619 ± 0.014

5.853 ± 0.024

3.198 ± 0.021

10.847 ± 0.04

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.349 ± 0.012

3.323 ± 0.022

5.168 ± 0.024

5.167 ± 0.023

6.238 ± 0.028

6.129 ± 0.026

5.858 ± 0.023

6.77 ± 0.027

1.494 ± 0.013

3.134 ± 0.017
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski