Caudovirales sp.

Taxonomy: Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; unclassified Caudovirales

Average proteome isoelectric point is 7.09

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 40 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A345MKJ4|A0A345MKJ4_9CAUD Uncharacterized protein OS=Caudovirales sp. OX=2202568 PE=4 SV=1
MM1 pKa = 7.88TDD3 pKa = 3.01TNATTTAAEE12 pKa = 4.38TTTATTEE19 pKa = 3.96AANTTTANTLLGGIGEE35 pKa = 4.32QSEE38 pKa = 4.23QAAGSLLGQQQGAAEE53 pKa = 4.45EE54 pKa = 4.67TTTTTPEE61 pKa = 3.91RR62 pKa = 11.84YY63 pKa = 9.4VFPDD67 pKa = 3.25KK68 pKa = 11.02FQVKK72 pKa = 10.35AGDD75 pKa = 4.19DD76 pKa = 3.58VDD78 pKa = 5.23FDD80 pKa = 4.35ASVRR84 pKa = 11.84KK85 pKa = 10.05LGEE88 pKa = 4.01AYY90 pKa = 9.13TNLEE94 pKa = 3.85KK95 pKa = 10.92RR96 pKa = 11.84FGAGEE101 pKa = 3.97ARR103 pKa = 11.84PADD106 pKa = 3.58VNGYY110 pKa = 10.07KK111 pKa = 9.93FDD113 pKa = 3.7EE114 pKa = 4.54SFGEE118 pKa = 4.53GFQEE122 pKa = 5.79AFTKK126 pKa = 10.7DD127 pKa = 3.39PNGQEE132 pKa = 4.0WLKK135 pKa = 10.23QAHH138 pKa = 5.91EE139 pKa = 4.66LGLNNQQVNFFMKK152 pKa = 10.25EE153 pKa = 3.67MIAAQPSTAEE163 pKa = 3.91KK164 pKa = 7.4TTGYY168 pKa = 9.12TEE170 pKa = 3.99AQAAEE175 pKa = 4.39LLQKK179 pKa = 9.88EE180 pKa = 4.25WSEE183 pKa = 3.9PAVYY187 pKa = 9.46QAKK190 pKa = 10.53LNAADD195 pKa = 3.88RR196 pKa = 11.84AARR199 pKa = 11.84NLLKK203 pKa = 10.53GDD205 pKa = 3.5YY206 pKa = 9.28QQFIGRR212 pKa = 11.84YY213 pKa = 8.35GNDD216 pKa = 3.31PQVIKK221 pKa = 10.87LLAAVGSEE229 pKa = 3.86MSEE232 pKa = 3.94DD233 pKa = 3.76ALRR236 pKa = 11.84LSGMPQLTADD246 pKa = 4.09SLDD249 pKa = 3.28DD250 pKa = 3.89LMRR253 pKa = 11.84SEE255 pKa = 5.12AYY257 pKa = 10.25NDD259 pKa = 3.57EE260 pKa = 4.01KK261 pKa = 11.2HH262 pKa = 6.28PDD264 pKa = 3.22HH265 pKa = 7.03RR266 pKa = 11.84RR267 pKa = 11.84VSQQVQDD274 pKa = 3.67FFKK277 pKa = 10.53RR278 pKa = 11.84QYY280 pKa = 8.73GTQEE284 pKa = 4.04VII286 pKa = 3.63

Molecular weight: 31.46 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A345MKK0|A0A345MKK0_9CAUD Uncharacterized protein OS=Caudovirales sp. OX=2202568 PE=4 SV=1
MM1 pKa = 7.9DD2 pKa = 3.85TTSDD6 pKa = 3.26LPYY9 pKa = 9.95AINMLHH15 pKa = 6.14STGQSAGSANSTPSSVAMRR34 pKa = 11.84CASCTSSQVYY44 pKa = 9.43GASFLMLRR52 pKa = 11.84FVSWWMGLQKK62 pKa = 10.63KK63 pKa = 10.0SISALPRR70 pKa = 11.84LSFASSSGSPSATHH84 pKa = 6.38RR85 pKa = 11.84RR86 pKa = 11.84ARR88 pKa = 11.84PAGG91 pKa = 3.52

Molecular weight: 9.6 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

40

0

40

12350

80

858

308.8

33.65

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

12.291 ± 0.731

1.441 ± 0.254

5.587 ± 0.274

4.826 ± 0.419

3.247 ± 0.208

8.065 ± 0.44

1.911 ± 0.183

4.308 ± 0.214

4.478 ± 0.33

7.822 ± 0.273

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.656 ± 0.245

4.364 ± 0.347

4.113 ± 0.21

5.587 ± 0.472

5.895 ± 0.294

6.162 ± 0.409

6.413 ± 0.368

6.47 ± 0.286

1.611 ± 0.152

2.753 ± 0.196
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski