Chryseotalea sanaruensis

Taxonomy: cellular organisms; Bacteria; FCB group; Bacteroidetes/Chlorobi group; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Chryseotalea

Average proteome isoelectric point is 6.67

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 3948 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A401UCJ0|A0A401UCJ0_9BACT Damage-inducible protein DinB OS=Chryseotalea sanaruensis OX=2482724 GN=SanaruYs_28400 PE=3 SV=1
MM1 pKa = 8.17RR2 pKa = 11.84DD3 pKa = 3.12NEE5 pKa = 4.63LIITNKK11 pKa = 9.37MIKK14 pKa = 9.76KK15 pKa = 9.87NLMKK19 pKa = 10.32HH20 pKa = 5.5KK21 pKa = 9.42RR22 pKa = 11.84NSYY25 pKa = 10.37IPFLLLSSIGLLLSCDD41 pKa = 3.79NEE43 pKa = 4.66DD44 pKa = 3.47EE45 pKa = 4.48VTTSFEE51 pKa = 4.51RR52 pKa = 11.84VSSTYY57 pKa = 10.88EE58 pKa = 3.91EE59 pKa = 4.25INGTGEE65 pKa = 3.92VVIPLRR71 pKa = 11.84STGSITSDD79 pKa = 2.63NVTVQFDD86 pKa = 3.6GTATEE91 pKa = 4.92GEE93 pKa = 4.27DD94 pKa = 4.15FEE96 pKa = 5.26LVSINSEE103 pKa = 4.07SMVIRR108 pKa = 11.84VIDD111 pKa = 4.11DD112 pKa = 3.49NLFEE116 pKa = 4.07EE117 pKa = 4.71TEE119 pKa = 4.28YY120 pKa = 11.36VRR122 pKa = 11.84VLLVSNGANVGGNAIHH138 pKa = 7.23RR139 pKa = 11.84LNIVSNCEE147 pKa = 4.12DD148 pKa = 3.06IGGLDD153 pKa = 3.17VGFFAGDD160 pKa = 3.25YY161 pKa = 9.98DD162 pKa = 3.99ALEE165 pKa = 4.95DD166 pKa = 3.87YY167 pKa = 11.33GGGTTYY173 pKa = 10.98GPYY176 pKa = 10.25TITLVQDD183 pKa = 3.57EE184 pKa = 4.62EE185 pKa = 4.84DD186 pKa = 3.43PTRR189 pKa = 11.84FSFDD193 pKa = 3.05NLYY196 pKa = 11.14DD197 pKa = 4.02SGCDD201 pKa = 2.78AYY203 pKa = 10.92MIFDD207 pKa = 3.94YY208 pKa = 11.55ANGTVAFPNQSPCDD222 pKa = 3.84SPLTNSSGTFSIDD235 pKa = 2.99LCEE238 pKa = 4.13EE239 pKa = 3.86TTLTINLNFDD249 pKa = 3.37GGDD252 pKa = 2.74WVYY255 pKa = 11.33RR256 pKa = 11.84FTKK259 pKa = 10.55LL260 pKa = 3.86

Molecular weight: 28.74 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A401UA79|A0A401UA79_9BACT Efflux transporter periplasmic adaptor subunit OS=Chryseotalea sanaruensis OX=2482724 GN=SanaruYs_20160 PE=4 SV=1
MM1 pKa = 7.5ARR3 pKa = 11.84NDD5 pKa = 2.8IRR7 pKa = 11.84LRR9 pKa = 11.84RR10 pKa = 11.84QRR12 pKa = 11.84MTTGNIARR20 pKa = 11.84HH21 pKa = 5.57RR22 pKa = 11.84NYY24 pKa = 9.99GDD26 pKa = 2.56IMEE29 pKa = 4.26RR30 pKa = 11.84HH31 pKa = 6.09EE32 pKa = 6.12RR33 pKa = 11.84DD34 pKa = 3.68QKK36 pKa = 7.95WKK38 pKa = 10.89RR39 pKa = 11.84MFKK42 pKa = 10.16VFIYY46 pKa = 9.5FLIAAFLTIILIIVLRR62 pKa = 11.84WEE64 pKa = 3.71QRR66 pKa = 11.84EE67 pKa = 4.12NKK69 pKa = 9.82DD70 pKa = 4.29LNANTKK76 pKa = 10.02KK77 pKa = 10.57AIEE80 pKa = 4.12LASPPMLSS88 pKa = 3.11

Molecular weight: 10.67 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

3948

0

3948

1390093

42

5619

352.1

39.55

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

7.104 ± 0.042

0.726 ± 0.013

5.263 ± 0.028

6.288 ± 0.042

5.047 ± 0.031

6.544 ± 0.045

1.793 ± 0.02

7.455 ± 0.031

6.992 ± 0.064

9.772 ± 0.046

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.23 ± 0.021

5.539 ± 0.044

3.525 ± 0.023

3.756 ± 0.026

3.978 ± 0.026

6.689 ± 0.036

5.811 ± 0.057

6.502 ± 0.036

1.121 ± 0.016

3.864 ± 0.028
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski