Mosquito circovirus

Taxonomy: Viruses; Monodnaviria; Shotokuvirae; Cressdnaviricota; Arfiviricetes; Cirlivirales; Circoviridae; unclassified Circoviridae

Average proteome isoelectric point is 8.83

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 2 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A0C5C3Z3|A0A0C5C3Z3_9CIRC ATP-dependent helicase Rep OS=Mosquito circovirus OX=1611039 PE=3 SV=1
MM1 pKa = 7.59SLIQFVCWTLNNYY14 pKa = 9.81SEE16 pKa = 6.04DD17 pKa = 4.05EE18 pKa = 4.24YY19 pKa = 11.55QSLIEE24 pKa = 4.13FSEE27 pKa = 3.47WRR29 pKa = 11.84YY30 pKa = 9.9IVIGRR35 pKa = 11.84EE36 pKa = 3.93VGEE39 pKa = 4.37TGTPHH44 pKa = 5.54LQGYY48 pKa = 9.51GEE50 pKa = 4.06LKK52 pKa = 10.06KK53 pKa = 10.47RR54 pKa = 11.84KK55 pKa = 9.53KK56 pKa = 9.92FAALKK61 pKa = 9.41NLFPRR66 pKa = 11.84VHH68 pKa = 6.07WEE70 pKa = 3.43QRR72 pKa = 11.84RR73 pKa = 11.84ASRR76 pKa = 11.84DD77 pKa = 3.0AAANYY82 pKa = 8.24CKK84 pKa = 10.39KK85 pKa = 10.27EE86 pKa = 3.75GRR88 pKa = 11.84FEE90 pKa = 4.17EE91 pKa = 4.91RR92 pKa = 11.84GSLPKK97 pKa = 10.36NASEE101 pKa = 4.34KK102 pKa = 10.19SSKK105 pKa = 9.99EE106 pKa = 3.31AITRR110 pKa = 11.84VKK112 pKa = 10.33SGQTMRR118 pKa = 11.84AILDD122 pKa = 3.95DD123 pKa = 4.43PPNLSGIRR131 pKa = 11.84MCQIWLSYY139 pKa = 11.01NEE141 pKa = 4.09PKK143 pKa = 10.55RR144 pKa = 11.84NFKK147 pKa = 11.01SEE149 pKa = 3.97VFWYY153 pKa = 10.23YY154 pKa = 10.77GASGTGKK161 pKa = 8.35TKK163 pKa = 10.46LASEE167 pKa = 4.24QAGPDD172 pKa = 4.02AYY174 pKa = 9.78WHH176 pKa = 7.46DD177 pKa = 3.62GTKK180 pKa = 9.79WFDD183 pKa = 3.32GYY185 pKa = 10.9DD186 pKa = 3.35AHH188 pKa = 6.85EE189 pKa = 4.73HH190 pKa = 5.87VLLDD194 pKa = 4.21DD195 pKa = 3.82YY196 pKa = 11.56RR197 pKa = 11.84GGNMKK202 pKa = 10.39FNFLLKK208 pKa = 10.6FLDD211 pKa = 4.19RR212 pKa = 11.84YY213 pKa = 9.48PLRR216 pKa = 11.84LEE218 pKa = 4.06VKK220 pKa = 9.72GGYY223 pKa = 9.0RR224 pKa = 11.84QLLAKK229 pKa = 9.57KK230 pKa = 9.69IWVTSIKK237 pKa = 10.06HH238 pKa = 5.29PKK240 pKa = 9.13EE241 pKa = 3.73IYY243 pKa = 10.21SFSEE247 pKa = 3.53MDD249 pKa = 3.65EE250 pKa = 4.0PTEE253 pKa = 3.76QLLRR257 pKa = 11.84RR258 pKa = 11.84ITTIKK263 pKa = 10.33KK264 pKa = 8.32MCACSQCEE272 pKa = 3.58RR273 pKa = 11.84FYY275 pKa = 11.6GNRR278 pKa = 11.84FEE280 pKa = 4.31VSRR283 pKa = 11.84FAVCGNTSTNSDD295 pKa = 3.09TAANEE300 pKa = 4.09TT301 pKa = 4.0

Molecular weight: 34.96 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A0C5C3Z3|A0A0C5C3Z3_9CIRC ATP-dependent helicase Rep OS=Mosquito circovirus OX=1611039 PE=3 SV=1
MM1 pKa = 7.66AYY3 pKa = 9.97KK4 pKa = 10.63RR5 pKa = 11.84MRR7 pKa = 11.84RR8 pKa = 11.84SRR10 pKa = 11.84KK11 pKa = 7.8RR12 pKa = 11.84APRR15 pKa = 11.84KK16 pKa = 8.08RR17 pKa = 11.84SYY19 pKa = 10.28RR20 pKa = 11.84RR21 pKa = 11.84RR22 pKa = 11.84FRR24 pKa = 11.84RR25 pKa = 11.84RR26 pKa = 11.84FNTSITRR33 pKa = 11.84TVLRR37 pKa = 11.84KK38 pKa = 9.77FFDD41 pKa = 3.68TSFSTTDD48 pKa = 2.7VGYY51 pKa = 11.0NYY53 pKa = 10.66LSDD56 pKa = 3.99NPKK59 pKa = 8.91GTPGWSYY66 pKa = 9.41YY67 pKa = 10.89ASSFHH72 pKa = 7.04HH73 pKa = 5.72YY74 pKa = 9.79RR75 pKa = 11.84VVGLALKK82 pKa = 8.63FVPKK86 pKa = 9.77ATTAPMEE93 pKa = 4.4TGMVHH98 pKa = 6.26YY99 pKa = 10.46DD100 pKa = 2.93SSLFFARR107 pKa = 11.84DD108 pKa = 3.19ISPVVWAEE116 pKa = 3.92TGNNLINKK124 pKa = 8.7ALSIPNMKK132 pKa = 9.85QRR134 pKa = 11.84TLTRR138 pKa = 11.84SFSLYY143 pKa = 10.02FPMRR147 pKa = 11.84KK148 pKa = 9.34SSPTTYY154 pKa = 10.1QATAGGYY161 pKa = 10.52LSTDD165 pKa = 3.62DD166 pKa = 4.6PKK168 pKa = 9.11TTQLVHH174 pKa = 5.53MVSEE178 pKa = 4.45KK179 pKa = 10.22MSFAIPGRR187 pKa = 11.84FYY189 pKa = 11.05LSLYY193 pKa = 10.23IRR195 pKa = 11.84FKK197 pKa = 10.3NKK199 pKa = 9.75RR200 pKa = 11.84YY201 pKa = 6.03TTTPVV206 pKa = 2.65

Molecular weight: 24.04 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

2

0

2

507

206

301

253.5

29.5

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

6.114 ± 0.177

1.381 ± 0.846

3.945 ± 0.335

5.523 ± 2.49

5.72 ± 0.659

5.917 ± 0.948

1.972 ± 0.019

3.748 ± 0.511

7.692 ± 0.549

7.101 ± 0.484

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.761 ± 0.687

4.339 ± 0.279

4.339 ± 0.91

2.564 ± 0.678

8.876 ± 1.402

8.481 ± 1.049

7.495 ± 1.95

4.339 ± 0.613

1.972 ± 0.613

5.72 ± 0.659
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski