Acinetobacter sp. TGL-Y2

Taxonomy: cellular organisms; Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Moraxellaceae; Acinetobacter; unclassified Acinetobacter

Average proteome isoelectric point is 6.49

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 3287 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A143G7K6|A0A143G7K6_9GAMM Uncharacterized protein OS=Acinetobacter sp. TGL-Y2 OX=1407071 GN=AMD27_15840 PE=4 SV=1
MM1 pKa = 7.3FKK3 pKa = 10.61KK4 pKa = 10.24IVLATAIIASLGTAHH19 pKa = 8.12AYY21 pKa = 7.95QAEE24 pKa = 4.34VGGTISLVDD33 pKa = 4.0PDD35 pKa = 4.75QGDD38 pKa = 3.6TSAGFAVDD46 pKa = 3.24GTYY49 pKa = 10.74YY50 pKa = 10.73FNPVQVKK57 pKa = 10.26NNPLNEE63 pKa = 3.85AAFLDD68 pKa = 3.96RR69 pKa = 11.84ASNVNGAISYY79 pKa = 10.3IDD81 pKa = 4.04YY82 pKa = 10.6DD83 pKa = 4.22LSDD86 pKa = 3.23ITTFGAGVEE95 pKa = 4.25YY96 pKa = 9.7FVPNSDD102 pKa = 4.36FYY104 pKa = 11.67VSANIGQTQLGSDD117 pKa = 3.53GSEE120 pKa = 4.21DD121 pKa = 4.14FDD123 pKa = 3.79TTTYY127 pKa = 9.99SAEE130 pKa = 4.15VGYY133 pKa = 10.68LPAPGLLVAVGLTGFDD149 pKa = 3.53NDD151 pKa = 5.1LGDD154 pKa = 5.48DD155 pKa = 3.66VDD157 pKa = 3.67PTLRR161 pKa = 11.84AKK163 pKa = 10.61YY164 pKa = 7.88VTQVGAYY171 pKa = 10.29DD172 pKa = 3.65MNFEE176 pKa = 4.13GAATFGDD183 pKa = 3.45INAYY187 pKa = 10.15GLGADD192 pKa = 4.81LYY194 pKa = 10.8LDD196 pKa = 3.4KK197 pKa = 10.74TFSVGAGFSGSDD209 pKa = 3.4ADD211 pKa = 5.42GVDD214 pKa = 3.53DD215 pKa = 5.08DD216 pKa = 4.9VFNIRR221 pKa = 11.84AKK223 pKa = 10.73KK224 pKa = 10.33FFTQQISLEE233 pKa = 4.15GSVNFADD240 pKa = 3.89AGNVFGVRR248 pKa = 11.84GAYY251 pKa = 9.79RR252 pKa = 11.84FF253 pKa = 3.58

Molecular weight: 26.72 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A143G7V6|A0A143G7V6_9GAMM Uncharacterized protein OS=Acinetobacter sp. TGL-Y2 OX=1407071 GN=AMD27_13585 PE=4 SV=1
MM1 pKa = 7.45KK2 pKa = 9.55RR3 pKa = 11.84TFQPSEE9 pKa = 3.97LKK11 pKa = 10.13RR12 pKa = 11.84KK13 pKa = 8.98RR14 pKa = 11.84VHH16 pKa = 6.36GFRR19 pKa = 11.84ARR21 pKa = 11.84MATKK25 pKa = 10.4AGRR28 pKa = 11.84QVLARR33 pKa = 11.84RR34 pKa = 11.84RR35 pKa = 11.84AKK37 pKa = 10.24GRR39 pKa = 11.84QSLTVV44 pKa = 3.17

Molecular weight: 5.17 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

3287

0

3287

989157

33

4289

300.9

33.59

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

8.46 ± 0.086

0.94 ± 0.015

5.41 ± 0.048

5.857 ± 0.048

4.3 ± 0.038

6.37 ± 0.06

2.35 ± 0.033

7.029 ± 0.04

5.942 ± 0.047

10.227 ± 0.063

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.515 ± 0.03

4.77 ± 0.053

3.773 ± 0.036

5.173 ± 0.043

4.147 ± 0.044

6.397 ± 0.043

5.375 ± 0.066

6.6 ± 0.046

1.173 ± 0.021

3.191 ± 0.031
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski