Siegesbeckia yellow vein virus-[GD13]-associated DNA beta
Taxonomy: Viruses; Tolecusatellitidae; Betasatellite; unclassified Betasatellite; Siegesbeckia yellow vein virus-associated DNA beta
Average proteome isoelectric point is 4.93
Get precalculated fractions of proteins
Virtual 2D-PAGE plot for 1 proteins (isoelectric point calculated using IPC2_protein)
Get csv file with sequences according to given criteria:
* You can choose from 21 different methods for calculating isoelectric point
Summary statistics related to proteome-wise predictions
Protein with the lowest isoelectric point:
>tr|Q14RT6|Q14RT6_9VIRU Putative C1 protein OS=Siegesbeckia yellow vein virus-[GD13]-associated DNA beta OX=371411 GN=C1 PE=4 SV=1
MM1 pKa = 7.72TITYY5 pKa = 10.53NNGKK9 pKa = 9.86GVTFTINVRR18 pKa = 11.84ISPNLKK24 pKa = 8.18VHH26 pKa = 7.0LRR28 pKa = 11.84MLCTNEE34 pKa = 3.92PVMSRR39 pKa = 11.84YY40 pKa = 10.33NYY42 pKa = 8.93ILPYY46 pKa = 8.54EE47 pKa = 4.7HH48 pKa = 7.55EE49 pKa = 5.75DD50 pKa = 3.02IFPPFDD56 pKa = 3.51INGTEE61 pKa = 4.04EE62 pKa = 4.07AVKK65 pKa = 8.94EE66 pKa = 4.42TIRR69 pKa = 11.84IMTEE73 pKa = 3.35GVYY76 pKa = 10.7FKK78 pKa = 10.75DD79 pKa = 3.02ITKK82 pKa = 10.8EE83 pKa = 3.93EE84 pKa = 4.35LLDD87 pKa = 4.92SIDD90 pKa = 2.96TMMIEE95 pKa = 4.1RR96 pKa = 11.84FQFIEE101 pKa = 4.59LDD103 pKa = 3.81TKK105 pKa = 11.16GVTSVTSRR113 pKa = 11.84CTLL116 pKa = 3.29
MM1 pKa = 7.72TITYY5 pKa = 10.53NNGKK9 pKa = 9.86GVTFTINVRR18 pKa = 11.84ISPNLKK24 pKa = 8.18VHH26 pKa = 7.0LRR28 pKa = 11.84MLCTNEE34 pKa = 3.92PVMSRR39 pKa = 11.84YY40 pKa = 10.33NYY42 pKa = 8.93ILPYY46 pKa = 8.54EE47 pKa = 4.7HH48 pKa = 7.55EE49 pKa = 5.75DD50 pKa = 3.02IFPPFDD56 pKa = 3.51INGTEE61 pKa = 4.04EE62 pKa = 4.07AVKK65 pKa = 8.94EE66 pKa = 4.42TIRR69 pKa = 11.84IMTEE73 pKa = 3.35GVYY76 pKa = 10.7FKK78 pKa = 10.75DD79 pKa = 3.02ITKK82 pKa = 10.8EE83 pKa = 3.93EE84 pKa = 4.35LLDD87 pKa = 4.92SIDD90 pKa = 2.96TMMIEE95 pKa = 4.1RR96 pKa = 11.84FQFIEE101 pKa = 4.59LDD103 pKa = 3.81TKK105 pKa = 11.16GVTSVTSRR113 pKa = 11.84CTLL116 pKa = 3.29
Molecular weight: 13.48 kDa
Isoelectric point according different methods:
Protein with the highest isoelectric point:
>tr|Q14RT6|Q14RT6_9VIRU Putative C1 protein OS=Siegesbeckia yellow vein virus-[GD13]-associated DNA beta OX=371411 GN=C1 PE=4 SV=1
MM1 pKa = 7.72TITYY5 pKa = 10.53NNGKK9 pKa = 9.86GVTFTINVRR18 pKa = 11.84ISPNLKK24 pKa = 8.18VHH26 pKa = 7.0LRR28 pKa = 11.84MLCTNEE34 pKa = 3.92PVMSRR39 pKa = 11.84YY40 pKa = 10.33NYY42 pKa = 8.93ILPYY46 pKa = 8.54EE47 pKa = 4.7HH48 pKa = 7.55EE49 pKa = 5.75DD50 pKa = 3.02IFPPFDD56 pKa = 3.51INGTEE61 pKa = 4.04EE62 pKa = 4.07AVKK65 pKa = 8.94EE66 pKa = 4.42TIRR69 pKa = 11.84IMTEE73 pKa = 3.35GVYY76 pKa = 10.7FKK78 pKa = 10.75DD79 pKa = 3.02ITKK82 pKa = 10.8EE83 pKa = 3.93EE84 pKa = 4.35LLDD87 pKa = 4.92SIDD90 pKa = 2.96TMMIEE95 pKa = 4.1RR96 pKa = 11.84FQFIEE101 pKa = 4.59LDD103 pKa = 3.81TKK105 pKa = 11.16GVTSVTSRR113 pKa = 11.84CTLL116 pKa = 3.29
MM1 pKa = 7.72TITYY5 pKa = 10.53NNGKK9 pKa = 9.86GVTFTINVRR18 pKa = 11.84ISPNLKK24 pKa = 8.18VHH26 pKa = 7.0LRR28 pKa = 11.84MLCTNEE34 pKa = 3.92PVMSRR39 pKa = 11.84YY40 pKa = 10.33NYY42 pKa = 8.93ILPYY46 pKa = 8.54EE47 pKa = 4.7HH48 pKa = 7.55EE49 pKa = 5.75DD50 pKa = 3.02IFPPFDD56 pKa = 3.51INGTEE61 pKa = 4.04EE62 pKa = 4.07AVKK65 pKa = 8.94EE66 pKa = 4.42TIRR69 pKa = 11.84IMTEE73 pKa = 3.35GVYY76 pKa = 10.7FKK78 pKa = 10.75DD79 pKa = 3.02ITKK82 pKa = 10.8EE83 pKa = 3.93EE84 pKa = 4.35LLDD87 pKa = 4.92SIDD90 pKa = 2.96TMMIEE95 pKa = 4.1RR96 pKa = 11.84FQFIEE101 pKa = 4.59LDD103 pKa = 3.81TKK105 pKa = 11.16GVTSVTSRR113 pKa = 11.84CTLL116 pKa = 3.29
Molecular weight: 13.48 kDa
Isoelectric point according different methods:
Peptides (in silico digests for buttom-up proteomics)
Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.| Try ESI |
 |
|---|
| ChTry ESI |
|
|---|
| ArgC ESI |
|
|---|
| LysN ESI |
|
|---|
| TryLysC ESI |
|
|---|
| Try MALDI |
|
|---|
| ChTry MALDI |
|
|---|
| ArgC MALDI |
|
|---|
| LysN MALDI |
|
|---|
| TryLysC MALDI |
|
|---|
| Try LTQ |
|
|---|
| ChTry LTQ |
|
|---|
| ArgC LTQ |
|
|---|
| LysN LTQ |
|
|---|
| TryLysC LTQ |
|
|---|
| Try MSlow |
|
|---|
| ChTry MSlow |
|
|---|
| ArgC MSlow |
|
|---|
| LysN MSlow |
|
|---|
| TryLysC MSlow |
|
|---|
| Try MShigh |
|
|---|
| ChTry MShigh |
|
|---|
| ArgC MShigh |
|
|---|
| LysN MShigh |
|
|---|
| TryLysC MShigh |
|
|---|
General Statistics
Number of major isoforms |
Number of additional isoforms |
Number of all proteins |
Number of amino acids |
Min. Seq. Length |
Max. Seq. Length |
Avg. Seq. Length |
Avg. Mol. Weight |
|---|---|---|---|---|---|---|---|
0 |
116 |
116 |
116 |
116.0 |
13.48 |
Amino acid frequency
Ala |
Cys |
Asp |
Glu |
Phe |
Gly |
His |
Ile |
Lys |
Leu |
|---|---|---|---|---|---|---|---|---|---|
0.862 ± 0.0 | 1.724 ± 0.0 |
5.172 ± 0.0 | 9.483 ± 0.0 |
5.172 ± 0.0 | 4.31 ± 0.0 |
1.724 ± 0.0 | 10.345 ± 0.0 |
5.172 ± 0.0 | 6.897 ± 0.0 |
Met |
Asn |
Gln |
Pro |
Arg |
Ser |
Thr |
Val |
Trp |
Tyr |
|---|---|---|---|---|---|---|---|---|---|
5.172 ± 0.0 | 6.034 ± 0.0 |
4.31 ± 0.0 | 0.862 ± 0.0 |
5.172 ± 0.0 | 4.31 ± 0.0 |
12.069 ± 0.0 | 6.897 ± 0.0 |
0.0 ± 0.0 | 4.31 ± 0.0 |
Most of the basic statistics you can see at this page can be downloaded from this CSV file
See this proteome in:
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here
| Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 | Contact: Lukasz P. Kozlowski |