Hyposoter fugitivus ichnovirus

Taxonomy: Viruses; Polydnaviridae; Ichnovirus

Average proteome isoelectric point is 7.2

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 143 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A2Q0I1|A2Q0I1_9VIRU C17.2 OS=Hyposoter fugitivus ichnovirus OX=265522 PE=4 SV=1
MM1 pKa = 8.04PEE3 pKa = 3.76TSEE6 pKa = 4.15FTTTEE11 pKa = 4.02PSVSSDD17 pKa = 2.99SGNTSGSDD25 pKa = 3.06TKK27 pKa = 11.35QNGDD31 pKa = 3.32GDD33 pKa = 4.65FGTSTVGSEE42 pKa = 4.18NRR44 pKa = 11.84LSSYY48 pKa = 10.84GGSTSSEE55 pKa = 3.89GMPKK59 pKa = 9.69TSQSTTTEE67 pKa = 4.11LSASSDD73 pKa = 3.37SGNTSEE79 pKa = 6.41SVTEE83 pKa = 3.97QNADD87 pKa = 2.86GDD89 pKa = 4.41FRR91 pKa = 11.84TSTVGPEE98 pKa = 4.01NRR100 pKa = 11.84LSSYY104 pKa = 10.83GGSTSSEE111 pKa = 3.89GMPKK115 pKa = 9.69TSQSTTTEE123 pKa = 4.11LSASSDD129 pKa = 3.37SGNTSEE135 pKa = 6.41SVTEE139 pKa = 3.97QNADD143 pKa = 2.86GDD145 pKa = 4.41FRR147 pKa = 11.84TSTVGPEE154 pKa = 4.09DD155 pKa = 3.6RR156 pKa = 11.84LSGYY160 pKa = 9.78RR161 pKa = 11.84SSMSSKK167 pKa = 9.48STSEE171 pKa = 4.32EE172 pKa = 3.77NDD174 pKa = 3.23STTTEE179 pKa = 4.11VSTSTDD185 pKa = 3.07SEE187 pKa = 4.28NASTSDD193 pKa = 3.1TKK195 pKa = 11.03QIADD199 pKa = 3.84EE200 pKa = 4.59DD201 pKa = 4.69FGTSTVGTEE210 pKa = 4.09DD211 pKa = 3.3HH212 pKa = 6.56LSGYY216 pKa = 10.28RR217 pKa = 11.84SSTSSKK223 pKa = 10.78GMSEE227 pKa = 4.3VNASTTTEE235 pKa = 4.04LSTTTDD241 pKa = 3.18SEE243 pKa = 4.35NASTSDD249 pKa = 3.08AKK251 pKa = 11.08QNADD255 pKa = 2.88GDD257 pKa = 4.36FARR260 pKa = 11.84STVGSGDD267 pKa = 3.79HH268 pKa = 5.29SWEE271 pKa = 4.35YY272 pKa = 11.18EE273 pKa = 3.88DD274 pKa = 4.16STSSEE279 pKa = 4.27PVPEE283 pKa = 4.49LNRR286 pKa = 11.84TATTRR291 pKa = 11.84SPTSSDD297 pKa = 3.05AASAGSLFILYY308 pKa = 8.79FVVFVCFICICLSTFIPICVYY329 pKa = 10.44INKK332 pKa = 9.16KK333 pKa = 10.42RR334 pKa = 11.84NFIKK338 pKa = 10.81NSDD341 pKa = 3.69MEE343 pKa = 4.39MKK345 pKa = 9.92TPHH348 pKa = 6.17EE349 pKa = 4.48LCTT352 pKa = 3.78

Molecular weight: 36.96 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A2Q0H3|A2Q0H3_9VIRU N gene-c9.1 OS=Hyposoter fugitivus ichnovirus OX=265522 PE=4 SV=1
MM1 pKa = 8.28LEE3 pKa = 3.74ISRR6 pKa = 11.84LRR8 pKa = 11.84DD9 pKa = 3.6KK10 pKa = 10.9INKK13 pKa = 8.17GRR15 pKa = 11.84PRR17 pKa = 11.84TCLSSACVDD26 pKa = 2.91IRR28 pKa = 11.84IYY30 pKa = 11.44SMSKK34 pKa = 9.47QGKK37 pKa = 6.33KK38 pKa = 7.56QRR40 pKa = 11.84NILEE44 pKa = 4.42RR45 pKa = 11.84DD46 pKa = 3.57TVSDD50 pKa = 3.69YY51 pKa = 11.61VLYY54 pKa = 10.26IIYY57 pKa = 8.46EE58 pKa = 4.0QRR60 pKa = 11.84HH61 pKa = 4.55SLRR64 pKa = 11.84RR65 pKa = 11.84VLMQKK70 pKa = 9.34GCRR73 pKa = 11.84RR74 pKa = 11.84SVRR77 pKa = 11.84LPSGTPKK84 pKa = 10.45KK85 pKa = 9.65MCRR88 pKa = 11.84QCTEE92 pKa = 4.22LLRR95 pKa = 11.84PDD97 pKa = 4.13CRR99 pKa = 11.84TSCSANLTDD108 pKa = 4.42CLSRR112 pKa = 11.84TWRR115 pKa = 11.84SRR117 pKa = 3.04

Molecular weight: 13.77 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

143

0

143

26717

67

505

186.8

21.5

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

5.936 ± 0.177

3.249 ± 0.127

4.649 ± 0.195

6.314 ± 0.301

5.12 ± 0.208

4.177 ± 0.139

3.526 ± 0.129

5.382 ± 0.197

4.667 ± 0.158

9.649 ± 0.235

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.657 ± 0.088

4.409 ± 0.129

4.439 ± 0.173

3.908 ± 0.163

6.801 ± 0.276

7.939 ± 0.373

5.667 ± 0.264

6.292 ± 0.186

1.4 ± 0.075

3.818 ± 0.188
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski