Antarctic penguin virus A

Taxonomy: Viruses; Riboviria; Orthornavirae; Negarnaviricota; Haploviricotina; Monjiviricetes; Mononegavirales; Paramyxoviridae; Avulavirinae; Orthoavulavirus; Avian orthoavulavirus 17

Average proteome isoelectric point is 6.98

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 6 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A1Y0KBV0|A0A1Y0KBV0_9MONO Phosphoprotein OS=Antarctic penguin virus A OX=2006072 PE=4 SV=1
MM1 pKa = 7.33SSVFAEE7 pKa = 3.64YY8 pKa = 10.93DD9 pKa = 3.23KK10 pKa = 11.26FLEE13 pKa = 4.62NQTHH17 pKa = 6.01PPSRR21 pKa = 11.84ALPTEE26 pKa = 4.44GGGSLKK32 pKa = 10.74VEE34 pKa = 4.0VPVFVLNSDD43 pKa = 3.78DD44 pKa = 4.6PEE46 pKa = 4.24LRR48 pKa = 11.84WRR50 pKa = 11.84FVCFCLRR57 pKa = 11.84LAISEE62 pKa = 4.23SSNRR66 pKa = 11.84PLRR69 pKa = 11.84QGALISVLCAHH80 pKa = 6.56AQVMKK85 pKa = 10.27TYY87 pKa = 9.07ATLAAQSGEE96 pKa = 3.92AVITILEE103 pKa = 4.32IDD105 pKa = 4.38DD106 pKa = 5.65FDD108 pKa = 6.77DD109 pKa = 4.4KK110 pKa = 11.44MPVFNSRR117 pKa = 11.84SGITDD122 pKa = 2.93EE123 pKa = 4.27RR124 pKa = 11.84AARR127 pKa = 11.84LALIAADD134 pKa = 3.67IPRR137 pKa = 11.84ACSNEE142 pKa = 4.11TPFANAATEE151 pKa = 4.03NEE153 pKa = 4.21PPEE156 pKa = 4.66DD157 pKa = 4.57ASDD160 pKa = 3.45TLDD163 pKa = 4.1RR164 pKa = 11.84IFSVQVQVWITVAKK178 pKa = 10.69AMTAFEE184 pKa = 4.14TAEE187 pKa = 3.87EE188 pKa = 4.62SEE190 pKa = 4.11TRR192 pKa = 11.84RR193 pKa = 11.84LNKK196 pKa = 9.94YY197 pKa = 6.6MQQGRR202 pKa = 11.84VQKK205 pKa = 10.59KK206 pKa = 8.44CLLYY210 pKa = 10.01PIVRR214 pKa = 11.84TTVQMTIRR222 pKa = 11.84QSLVIRR228 pKa = 11.84GFLVNEE234 pKa = 4.39MKK236 pKa = 10.63RR237 pKa = 11.84AQNSPGGKK245 pKa = 7.92SAYY248 pKa = 9.76YY249 pKa = 10.5SFVGDD254 pKa = 3.49ISAYY258 pKa = 9.24IKK260 pKa = 10.75NAGVTAFLLTLKK272 pKa = 10.75FGIQTRR278 pKa = 11.84LPALALSSLAGDD290 pKa = 3.52IQKK293 pKa = 10.13VKK295 pKa = 10.86QLMVLYY301 pKa = 10.29RR302 pKa = 11.84EE303 pKa = 4.35KK304 pKa = 11.31GEE306 pKa = 4.38NGPFMTLLGDD316 pKa = 3.88PDD318 pKa = 3.59QMQFAPAEE326 pKa = 4.01YY327 pKa = 10.29SLLYY331 pKa = 10.23SYY333 pKa = 11.85AMGVASVLEE342 pKa = 4.46ASTSRR347 pKa = 11.84YY348 pKa = 8.5QFARR352 pKa = 11.84DD353 pKa = 3.51FMNPTFWRR361 pKa = 11.84IGVEE365 pKa = 4.3SAQSLSTSVDD375 pKa = 2.96EE376 pKa = 5.23QMATEE381 pKa = 4.25LQLGRR386 pKa = 11.84QSRR389 pKa = 11.84AALGEE394 pKa = 3.94MMAKK398 pKa = 9.69VAGSAGEE405 pKa = 4.06YY406 pKa = 9.77TMNAPAAAVMIGASGPNPPSSARR429 pKa = 11.84QSGSGPKK436 pKa = 8.23QTEE439 pKa = 3.85SDD441 pKa = 3.26IQLPPGFNTPEE452 pKa = 4.78DD453 pKa = 3.58YY454 pKa = 10.89LAYY457 pKa = 9.73IRR459 pKa = 11.84NEE461 pKa = 3.86EE462 pKa = 3.98AFKK465 pKa = 10.81SGRR468 pKa = 11.84ATSSTEE474 pKa = 3.91VPKK477 pKa = 10.8TPGLAGDD484 pKa = 4.77NDD486 pKa = 4.1PQVDD490 pKa = 3.58WEE492 pKa = 4.29LL493 pKa = 4.01

Molecular weight: 53.9 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A1Y0KBW5|A0A1Y0KBW5_9MONO Hemagglutinin-neuraminidase OS=Antarctic penguin virus A OX=2006072 PE=3 SV=1
MM1 pKa = 7.51LRR3 pKa = 11.84AEE5 pKa = 4.79DD6 pKa = 3.68LASRR10 pKa = 11.84PIIGQQPAISMEE22 pKa = 3.84SRR24 pKa = 11.84TVKK27 pKa = 10.6LYY29 pKa = 11.02VDD31 pKa = 3.97PDD33 pKa = 3.76EE34 pKa = 4.99PASSLLAFPLIFTSTSDD51 pKa = 3.27GKK53 pKa = 9.75KK54 pKa = 8.33TLSPQYY60 pKa = 9.81RR61 pKa = 11.84IQIIDD66 pKa = 3.7GEE68 pKa = 4.42RR69 pKa = 11.84EE70 pKa = 3.9SDD72 pKa = 3.22SDD74 pKa = 4.76LIFISTYY81 pKa = 10.5GFISGMEE88 pKa = 4.01TAVDD92 pKa = 3.29KK93 pKa = 11.38SLAVDD98 pKa = 3.77MGQEE102 pKa = 3.99RR103 pKa = 11.84TILTSCMLPLGSIPKK118 pKa = 9.82VPDD121 pKa = 3.08FHH123 pKa = 8.33GLAKK127 pKa = 10.39SCLEE131 pKa = 4.39LKK133 pKa = 10.52VSCKK137 pKa = 10.03KK138 pKa = 10.51AATNSEE144 pKa = 4.1RR145 pKa = 11.84IIFNVTDD152 pKa = 4.48FPPILAQCAAIKK164 pKa = 10.55KK165 pKa = 10.07GVTSCNASVNLKK177 pKa = 10.49APEE180 pKa = 4.83KK181 pKa = 10.88IMGNYY186 pKa = 9.91DD187 pKa = 3.49LVYY190 pKa = 10.49KK191 pKa = 9.23VTFVSLTVIPASLVYY206 pKa = 10.18KK207 pKa = 10.52VSSPVLKK214 pKa = 10.57AGSSLTYY221 pKa = 9.72SLNMSVIIKK230 pKa = 10.25VDD232 pKa = 3.02ITDD235 pKa = 3.44KK236 pKa = 11.2HH237 pKa = 6.08PSAKK241 pKa = 10.39LLLKK245 pKa = 10.44KK246 pKa = 10.41DD247 pKa = 3.8DD248 pKa = 3.85QYY250 pKa = 12.08LANLWVHH257 pKa = 6.71WGLISAVKK265 pKa = 10.37KK266 pKa = 9.72GGKK269 pKa = 8.63RR270 pKa = 11.84HH271 pKa = 5.76TIEE274 pKa = 3.9EE275 pKa = 4.17VAEE278 pKa = 4.34KK279 pKa = 10.24IRR281 pKa = 11.84RR282 pKa = 11.84LDD284 pKa = 3.4IKK286 pKa = 10.78IEE288 pKa = 3.94LVDD291 pKa = 4.2LFGPSLIIQCKK302 pKa = 7.99GVKK305 pKa = 8.84TKK307 pKa = 10.8LLAGFFSKK315 pKa = 10.38QGTAVYY321 pKa = 8.82PISRR325 pKa = 11.84AAPQIGKK332 pKa = 9.15LLWSQTGTIMEE343 pKa = 4.57ASVVIQGGNQTQLASTSDD361 pKa = 3.79YY362 pKa = 10.95VIEE365 pKa = 4.29STKK368 pKa = 9.71VTLGKK373 pKa = 10.81GNSKK377 pKa = 10.61YY378 pKa = 11.05NPFRR382 pKa = 11.84KK383 pKa = 9.75

Molecular weight: 41.78 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

6

0

6

4620

383

2202

770.0

84.92

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

7.835 ± 1.107

1.991 ± 0.372

5.173 ± 0.49

4.156 ± 0.417

3.247 ± 0.383

5.952 ± 0.513

1.797 ± 0.37

7.662 ± 0.72

4.372 ± 0.538

10.584 ± 0.879

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.532 ± 0.373

4.567 ± 0.345

4.87 ± 0.54

5.065 ± 0.514

5.043 ± 0.63

8.918 ± 0.525

6.212 ± 0.511

5.931 ± 0.438

0.844 ± 0.179

3.247 ± 0.475
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski