Philantomba monticola polyomavirus 1

Taxonomy: Viruses; Monodnaviria; Shotokuvirae; Cossaviricota; Papovaviricetes; Sepolyvirales; Polyomaviridae; Alphapolyomavirus

Average proteome isoelectric point is 6.88

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 8 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A2S1CJI1|A0A2S1CJI1_9POLY Uncharacterized protein OS=Philantomba monticola polyomavirus 1 OX=2170411 PE=4 SV=1
MM1 pKa = 7.26GAIISSLVEE10 pKa = 4.05MIALATEE17 pKa = 4.41ISAASGLTIEE27 pKa = 5.1ALLTGEE33 pKa = 4.43ALGALEE39 pKa = 5.17AEE41 pKa = 4.86VFSLMSIEE49 pKa = 4.04GLSGIEE55 pKa = 4.56ALAQLGWTAEE65 pKa = 4.13QFSNLAFIASTFSDD79 pKa = 3.81VVGYY83 pKa = 10.32GVFFQTTSGLASLISVGLRR102 pKa = 11.84LGLDD106 pKa = 3.35VASVNRR112 pKa = 11.84NQTEE116 pKa = 4.0QTLLAIFGEE125 pKa = 4.56VSKK128 pKa = 10.56LIPINISYY136 pKa = 10.25HH137 pKa = 5.93LNPLKK142 pKa = 10.42WEE144 pKa = 4.21EE145 pKa = 4.11SLKK148 pKa = 10.15TNCPKK153 pKa = 10.67DD154 pKa = 3.74LEE156 pKa = 4.7NIPIEE161 pKa = 3.95MRR163 pKa = 11.84HH164 pKa = 5.68IIGVLMQNSRR174 pKa = 11.84WVIQSSPTTDD184 pKa = 3.38PQKK187 pKa = 10.61EE188 pKa = 4.15SGDD191 pKa = 3.22IVEE194 pKa = 4.9FQPPPGGANQPATPDD209 pKa = 2.83WMLPLILRR217 pKa = 11.84LNGASKK223 pKa = 10.47EE224 pKa = 4.05KK225 pKa = 10.87SSLCSS230 pKa = 3.25

Molecular weight: 24.6 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A2S1CJK0|A0A2S1CJK0_9POLY VP1 OS=Philantomba monticola polyomavirus 1 OX=2170411 GN=VP1 PE=3 SV=1
MM1 pKa = 7.59ARR3 pKa = 11.84RR4 pKa = 11.84PSEE7 pKa = 3.82RR8 pKa = 11.84DD9 pKa = 3.0IEE11 pKa = 4.49NGAPQYY17 pKa = 11.56LPMKK21 pKa = 9.31NLNSEE26 pKa = 4.37EE27 pKa = 4.74IYY29 pKa = 10.71TVMSPLSPVKK39 pKa = 10.56KK40 pKa = 10.08KK41 pKa = 7.17MHH43 pKa = 5.93RR44 pKa = 11.84NSRR47 pKa = 11.84KK48 pKa = 9.92SLDD51 pKa = 3.55ITQHH55 pKa = 6.25PSLLPFPTPPMNPGPPPPLPPKK77 pKa = 10.13RR78 pKa = 11.84IRR80 pKa = 11.84RR81 pKa = 11.84SVSLNPTPPPRR92 pKa = 11.84VQLLEE97 pKa = 4.46DD98 pKa = 3.55EE99 pKa = 4.57VRR101 pKa = 11.84DD102 pKa = 4.69LKK104 pKa = 11.29EE105 pKa = 3.81KK106 pKa = 9.95LQKK109 pKa = 10.01RR110 pKa = 11.84DD111 pKa = 3.22EE112 pKa = 4.8DD113 pKa = 4.75LLKK116 pKa = 10.04TWMNLIQARR125 pKa = 11.84KK126 pKa = 8.89LALQAHH132 pKa = 5.59RR133 pKa = 11.84QKK135 pKa = 10.7QKK137 pKa = 10.53RR138 pKa = 11.84QALTVLMIFLLVCLILSVMLYY159 pKa = 9.85FLIRR163 pKa = 11.84QQ164 pKa = 3.56

Molecular weight: 19.1 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

8

0

8

2841

92

776

355.1

39.95

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

6.054 ± 0.46

3.203 ± 0.478

4.646 ± 0.46

6.969 ± 0.467

5.174 ± 0.645

5.561 ± 0.787

2.006 ± 0.186

4.928 ± 0.469

7.251 ± 0.527

10.736 ± 0.632

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.006 ± 0.365

4.541 ± 0.108

5.843 ± 0.883

3.907 ± 0.366

4.189 ± 0.368

7.92 ± 0.73

5.421 ± 0.236

5.491 ± 0.297

1.338 ± 0.233

2.816 ± 0.287
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski