Marinomonas phage YY

Taxonomy: Viruses; Varidnaviria; Bamfordvirae; Preplasmiviricota; Tectiliviricetes; Vinavirales; Corticoviridae; unclassified Corticoviridae

Average proteome isoelectric point is 6.4

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 4 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A2S1GTT5|A0A2S1GTT5_9VIRU Uncharacterized protein OS=Marinomonas phage YY OX=2163588 PE=4 SV=1
MM1 pKa = 6.5TTEE4 pKa = 4.69FLPALEE10 pKa = 4.26SVVLNSPPAFEE21 pKa = 5.71AEE23 pKa = 4.29LPPMLMEE30 pKa = 5.24PDD32 pKa = 4.34AFAQYY37 pKa = 10.84EE38 pKa = 4.05PDD40 pKa = 3.47AANAGHH46 pKa = 6.93APDD49 pKa = 4.07MAPAAEE55 pKa = 4.64VIDD58 pKa = 5.06LLAEE62 pKa = 4.42PDD64 pKa = 4.96FLEE67 pKa = 4.43QWALMHH73 pKa = 7.04DD74 pKa = 3.91MAGGMIQMRR83 pKa = 11.84TGAPCPLGDD92 pKa = 3.69QARR95 pKa = 11.84SAGGMAAGKK104 pKa = 9.59AAYY107 pKa = 9.63QLISSNPALAKK118 pKa = 10.55LILGTEE124 pKa = 4.26STFLGQLAAIGMHH137 pKa = 6.59GFACVQVVKK146 pKa = 10.6ASARR150 pKa = 11.84GDD152 pKa = 3.48TLPQIEE158 pKa = 4.73PEE160 pKa = 4.07KK161 pKa = 10.61EE162 pKa = 3.72AAA164 pKa = 3.88

Molecular weight: 17.11 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A2S1GTR1|A0A2S1GTR1_9VIRU DNA helicase OS=Marinomonas phage YY OX=2163588 PE=4 SV=1
MM1 pKa = 7.53TSPTFKK7 pKa = 10.71TEE9 pKa = 3.25ITAVWGCRR17 pKa = 11.84GSGKK21 pKa = 7.28TTLAKK26 pKa = 10.57KK27 pKa = 10.1LVADD31 pKa = 4.03HH32 pKa = 7.16RR33 pKa = 11.84PAQVLFIDD41 pKa = 4.19PLAAEE46 pKa = 4.67GVDD49 pKa = 3.67VFGVAPAIRR58 pKa = 11.84DD59 pKa = 3.67GQKK62 pKa = 10.78LVVCNAQSKK71 pKa = 9.25DD72 pKa = 3.6HH73 pKa = 6.62QIGALLTAYY82 pKa = 10.2ALSTPTRR89 pKa = 11.84PVYY92 pKa = 10.26AICDD96 pKa = 3.61EE97 pKa = 4.35APAYY101 pKa = 10.6LDD103 pKa = 3.61RR104 pKa = 11.84SSAALNKK111 pKa = 10.04IMFQGRR117 pKa = 11.84HH118 pKa = 5.6AGFGMCIIGQRR129 pKa = 11.84PAAVDD134 pKa = 3.39AQIRR138 pKa = 11.84SQAAVTYY145 pKa = 8.15WLKK148 pKa = 10.82LADD151 pKa = 3.91HH152 pKa = 6.74VDD154 pKa = 3.25VGVAAKK160 pKa = 10.63SLGTEE165 pKa = 4.28RR166 pKa = 11.84ARR168 pKa = 11.84SLQTLAPGEE177 pKa = 4.37FIKK180 pKa = 10.93HH181 pKa = 5.85PEE183 pKa = 3.63

Molecular weight: 19.54 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

4

0

4

584

78

183

146.0

15.84

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

14.726 ± 1.687

1.712 ± 0.401

5.822 ± 0.418

5.651 ± 0.99

3.938 ± 0.385

7.877 ± 0.119

2.74 ± 0.397

5.479 ± 0.678

3.253 ± 0.947

8.219 ± 0.969

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

3.253 ± 1.036

2.397 ± 0.603

7.192 ± 0.813

4.623 ± 0.353

6.507 ± 1.887

4.623 ± 0.213

4.281 ± 0.887

4.623 ± 1.075

1.541 ± 0.625

1.541 ± 0.235
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski