Odonata-associated circular virus-4

Taxonomy: Viruses; unclassified viruses; unclassified DNA viruses; unclassified ssDNA viruses

Average proteome isoelectric point is 9.07

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 2 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A0B4UGK2|A0A0B4UGK2_9VIRU Putative capsid protein OS=Odonata-associated circular virus-4 OX=1592124 PE=4 SV=1
MM1 pKa = 8.03PSTITYY7 pKa = 10.0IFTINNPTEE16 pKa = 4.7DD17 pKa = 4.24DD18 pKa = 3.55TDD20 pKa = 3.95KK21 pKa = 11.5LQLAPGITSIAYY33 pKa = 8.57QYY35 pKa = 11.15EE36 pKa = 4.01RR37 pKa = 11.84GEE39 pKa = 4.04TGTRR43 pKa = 11.84HH44 pKa = 4.47IQGAIRR50 pKa = 11.84FARR53 pKa = 11.84RR54 pKa = 11.84TTFNQVKK61 pKa = 10.12RR62 pKa = 11.84ILPRR66 pKa = 11.84AHH68 pKa = 6.58IEE70 pKa = 3.83AARR73 pKa = 11.84GTWQQCMDD81 pKa = 3.95YY82 pKa = 9.28CTKK85 pKa = 10.9LEE87 pKa = 4.04TRR89 pKa = 11.84EE90 pKa = 4.09EE91 pKa = 4.95GPFLLGKK98 pKa = 9.75CANEE102 pKa = 4.82DD103 pKa = 3.28MAPYY107 pKa = 10.02QRR109 pKa = 11.84LEE111 pKa = 3.81EE112 pKa = 4.95DD113 pKa = 3.34IKK115 pKa = 11.53NGATRR120 pKa = 11.84DD121 pKa = 4.07DD122 pKa = 3.47IEE124 pKa = 4.1NRR126 pKa = 11.84HH127 pKa = 5.44FKK129 pKa = 10.66LYY131 pKa = 10.19LRR133 pKa = 11.84HH134 pKa = 5.72HH135 pKa = 5.77TAINHH140 pKa = 6.21ILTFHH145 pKa = 6.5TKK147 pKa = 9.45PRR149 pKa = 11.84SNKK152 pKa = 8.19PTVTVLWGPTGTGKK166 pKa = 8.16TRR168 pKa = 11.84AVVKK172 pKa = 10.13RR173 pKa = 11.84ASNRR177 pKa = 11.84GDD179 pKa = 3.06SLYY182 pKa = 10.51IKK184 pKa = 10.28EE185 pKa = 4.49RR186 pKa = 11.84GKK188 pKa = 9.36WWDD191 pKa = 3.59GYY193 pKa = 11.17AGQAICLLDD202 pKa = 4.08EE203 pKa = 4.91FYY205 pKa = 11.3GWLPFGCLLRR215 pKa = 11.84LLDD218 pKa = 4.37RR219 pKa = 11.84YY220 pKa = 9.76PNRR223 pKa = 11.84VEE225 pKa = 4.03YY226 pKa = 10.64KK227 pKa = 10.4GGSTQFTSDD236 pKa = 4.41EE237 pKa = 3.6IWITSNKK244 pKa = 8.7EE245 pKa = 3.48PKK247 pKa = 9.6DD248 pKa = 3.5WYY250 pKa = 10.56KK251 pKa = 11.02EE252 pKa = 3.97EE253 pKa = 4.27YY254 pKa = 9.4MDD256 pKa = 4.8ALFRR260 pKa = 11.84RR261 pKa = 11.84LDD263 pKa = 4.02RR264 pKa = 11.84IVFCDD269 pKa = 3.45TNVWLLRR276 pKa = 11.84KK277 pKa = 9.42IKK279 pKa = 9.69EE280 pKa = 4.0QNRR283 pKa = 11.84PKK285 pKa = 10.55PYY287 pKa = 9.94TLNTRR292 pKa = 11.84QNRR295 pKa = 11.84LAVRR299 pKa = 11.84NLTT302 pKa = 3.69

Molecular weight: 35.39 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A0B4UGK2|A0A0B4UGK2_9VIRU Putative capsid protein OS=Odonata-associated circular virus-4 OX=1592124 PE=4 SV=1
MM1 pKa = 7.41VYY3 pKa = 10.04RR4 pKa = 11.84RR5 pKa = 11.84ANGGVSYY12 pKa = 10.53RR13 pKa = 11.84RR14 pKa = 11.84RR15 pKa = 11.84RR16 pKa = 11.84LRR18 pKa = 11.84SSRR21 pKa = 11.84VRR23 pKa = 11.84RR24 pKa = 11.84STSRR28 pKa = 11.84AKK30 pKa = 10.07YY31 pKa = 7.67SRR33 pKa = 11.84RR34 pKa = 11.84MRR36 pKa = 11.84RR37 pKa = 11.84RR38 pKa = 11.84RR39 pKa = 11.84SGRR42 pKa = 11.84YY43 pKa = 7.69GYY45 pKa = 10.38RR46 pKa = 11.84RR47 pKa = 11.84AGGSGYY53 pKa = 10.1GFRR56 pKa = 11.84VRR58 pKa = 11.84SRR60 pKa = 11.84GGLPTRR66 pKa = 11.84LTTRR70 pKa = 11.84WSTVYY75 pKa = 9.74TYY77 pKa = 10.92PDD79 pKa = 3.62GFEE82 pKa = 5.95HH83 pKa = 6.21IDD85 pKa = 2.96KK86 pKa = 9.78WIEE89 pKa = 3.96VVTSQTAPTGMEE101 pKa = 3.63NFFRR105 pKa = 11.84EE106 pKa = 4.81FKK108 pKa = 10.25PLYY111 pKa = 9.62AEE113 pKa = 4.2VYY115 pKa = 7.4VRR117 pKa = 11.84RR118 pKa = 11.84WRR120 pKa = 11.84AVGADD125 pKa = 3.75LQIVSTSEE133 pKa = 3.8GFRR136 pKa = 11.84LLSSVTIMLGIFRR149 pKa = 11.84IVLVFRR155 pKa = 11.84FSILVSVPKK164 pKa = 10.74LSRR167 pKa = 11.84FLSTGWVGGIVKK179 pKa = 10.15QKK181 pKa = 10.3SYY183 pKa = 11.01RR184 pKa = 11.84LAYY187 pKa = 10.35FSDD190 pKa = 3.67KK191 pKa = 11.19DD192 pKa = 3.81AVPDD196 pKa = 3.55KK197 pKa = 10.82ATAQPYY203 pKa = 9.22AASAPWMPMGSTWGWKK219 pKa = 9.61LGCLHH224 pKa = 7.18SNLEE228 pKa = 4.19WKK230 pKa = 10.75VFDD233 pKa = 4.37ANSFEE238 pKa = 4.6FVAKK242 pKa = 8.38FHH244 pKa = 5.8WAFRR248 pKa = 11.84GRR250 pKa = 11.84KK251 pKa = 8.12PLGVDD256 pKa = 2.95TDD258 pKa = 4.02YY259 pKa = 11.77NGYY262 pKa = 9.67IEE264 pKa = 5.2GDD266 pKa = 3.86VVIPTLDD273 pKa = 3.45HH274 pKa = 7.49DD275 pKa = 4.85PNN277 pKa = 4.07

Molecular weight: 31.98 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

2

0

2

579

277

302

289.5

33.68

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

5.872 ± 0.174

1.209 ± 0.557

5.009 ± 0.445

4.836 ± 1.043

4.663 ± 0.732

7.599 ± 0.937

1.9 ± 0.3

5.009 ± 0.919

5.354 ± 0.672

7.599 ± 0.724

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

1.727 ± 0.289

3.8 ± 1.074

4.491 ± 0.104

2.591 ± 0.754

11.226 ± 1.164

5.699 ± 2.186

7.772 ± 1.312

5.699 ± 1.949

2.936 ± 0.206

5.009 ± 0.267
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski