Klebsiella phage SopranoGao

Taxonomy: Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Podoviridae; Lastavirus; Klebsiella virus SopranoGao

Average proteome isoelectric point is 6.79

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 77 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A248SL37|A0A248SL37_9CAUD Uncharacterized protein OS=Klebsiella phage SopranoGao OX=2026944 GN=SopranoGao_19 PE=4 SV=1
MM1 pKa = 6.89ITIPVTGYY9 pKa = 11.08AIVLACSINAGTPDD23 pKa = 5.28CIEE26 pKa = 3.97QLATGYY32 pKa = 10.03VWANAQRR39 pKa = 11.84CQEE42 pKa = 4.24EE43 pKa = 4.58LDD45 pKa = 3.59HH46 pKa = 7.01AKK48 pKa = 10.22IPGAQCEE55 pKa = 4.48SLSGITVSDD64 pKa = 4.05EE65 pKa = 4.22GTGPALARR73 pKa = 11.84MIDD76 pKa = 3.63VEE78 pKa = 4.68GMM80 pKa = 3.32

Molecular weight: 8.37 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A248SKY6|A0A248SKY6_9CAUD Uncharacterized protein OS=Klebsiella phage SopranoGao OX=2026944 GN=SopranoGao_62 PE=4 SV=1
MM1 pKa = 7.64SKK3 pKa = 10.5RR4 pKa = 11.84DD5 pKa = 3.41IKK7 pKa = 10.65AKK9 pKa = 9.63RR10 pKa = 11.84WARR13 pKa = 11.84RR14 pKa = 11.84QPPEE18 pKa = 4.37PYY20 pKa = 10.17DD21 pKa = 3.73GVTIWFHH28 pKa = 4.06EE29 pKa = 4.65QIRR32 pKa = 11.84IMGDD36 pKa = 2.68GRR38 pKa = 11.84RR39 pKa = 11.84QFRR42 pKa = 11.84DD43 pKa = 3.01RR44 pKa = 11.84LAGIRR49 pKa = 11.84VEE51 pKa = 4.0RR52 pKa = 11.84QPWSEE57 pKa = 3.71WRR59 pKa = 11.84DD60 pKa = 3.6CC61 pKa = 4.46

Molecular weight: 7.57 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

77

0

77

19201

43

4369

249.4

27.69

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

10.833 ± 0.379

0.823 ± 0.201

6.161 ± 0.191

6.963 ± 0.423

3.109 ± 0.15

7.63 ± 0.331

1.703 ± 0.184

4.968 ± 0.252

5.479 ± 0.272

7.474 ± 0.191

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.651 ± 0.145

3.906 ± 0.171

4.724 ± 0.21

5.224 ± 0.399

6.562 ± 0.304

5.593 ± 0.244

5.593 ± 0.224

5.807 ± 0.267

1.823 ± 0.209

2.974 ± 0.154
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski