Spirochaeta thermophila (strain ATCC 700085 / DSM 6578 / Z-1203)

Taxonomy: cellular organisms; Bacteria; Spirochaetes; Spirochaetia; Spirochaetales; Spirochaetaceae; Spirochaeta; Spirochaeta thermophila

Average proteome isoelectric point is 6.29

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 2249 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    

Protein with the lowest isoelectric point:
>tr|G0GBM5|G0GBM5_SPITZ Methyltransferase type 11 OS=Spirochaeta thermophila (strain ATCC 700085 / DSM 6578 / Z-1203) OX=869211 GN=Spith_0828 PE=4 SV=1
MM1 pKa = 7.47GFGSGTLFGQSAIPAQSGNYY21 pKa = 9.19LQVTGTPQNGDD32 pKa = 3.4EE33 pKa = 4.53DD34 pKa = 5.14PYY36 pKa = 10.8MVLFYY41 pKa = 10.01EE42 pKa = 4.57VPDD45 pKa = 4.7TITSTLYY52 pKa = 10.52FAVEE56 pKa = 4.16HH57 pKa = 6.96PGLSGAAPDD66 pKa = 3.8QGTGGTWEE74 pKa = 4.06FFLVGGAGALTQSRR88 pKa = 11.84MLNFANDD95 pKa = 3.86TEE97 pKa = 4.53VLAGTVLSTIQATNEE112 pKa = 4.11TGWVYY117 pKa = 10.8FDD119 pKa = 4.95GVLPSQGEE127 pKa = 4.5HH128 pKa = 5.73IGNRR132 pKa = 11.84YY133 pKa = 7.56YY134 pKa = 10.97FKK136 pKa = 10.6IVAKK140 pKa = 10.53APNGNKK146 pKa = 9.93NGFRR150 pKa = 11.84CDD152 pKa = 3.12VSYY155 pKa = 11.59SNSGTPTGDD164 pKa = 2.85SSIRR168 pKa = 11.84AFAYY172 pKa = 9.71VWTLALLDD180 pKa = 3.77NVGRR184 pKa = 11.84LWDD187 pKa = 4.84LYY189 pKa = 10.65PFVPDD194 pKa = 3.44SAGPTDD200 pKa = 3.87TIDD203 pKa = 3.45YY204 pKa = 10.03KK205 pKa = 11.15NWDD208 pKa = 3.74MDD210 pKa = 3.65GGADD214 pKa = 5.03TLAAWDD220 pKa = 3.86KK221 pKa = 11.33SGNPLTAPTPSGDD234 pKa = 3.3GATWPDD240 pKa = 3.7DD241 pKa = 3.64VATTSYY247 pKa = 10.86TIGSEE252 pKa = 4.65TNGTWHH258 pKa = 6.5LQITEE263 pKa = 4.31GNGGEE268 pKa = 4.08PAINTSLFWFTLNDD282 pKa = 3.51TTADD286 pKa = 3.72DD287 pKa = 3.7TDD289 pKa = 3.81VPLRR293 pKa = 11.84AYY295 pKa = 9.17SAPYY299 pKa = 8.72TPPAPDD305 pKa = 3.56HH306 pKa = 6.47VVISPDD312 pKa = 3.17AQTVQTGQTASLTLQIVDD330 pKa = 3.82ASGSPVPYY338 pKa = 10.17VRR340 pKa = 11.84NLYY343 pKa = 8.57VTVSGSATISPDD355 pKa = 3.53NNGTPQTEE363 pKa = 4.43LLTTSSDD370 pKa = 3.79GIATFTVTDD379 pKa = 4.91GSAEE383 pKa = 4.28TVTVTVYY390 pKa = 10.37WDD392 pKa = 3.44GTGGSDD398 pKa = 4.11SFGTSSYY405 pKa = 10.18ATATVDD411 pKa = 3.56VAASLPPVISSAANTTIPIGTGPYY435 pKa = 10.28ALADD439 pKa = 3.55VTVTDD444 pKa = 3.57VSGGQVTAANGIRR457 pKa = 11.84IRR459 pKa = 11.84LGGGLSAQFDD469 pKa = 3.99AAVVSLTTSGTAVSNGRR486 pKa = 11.84VANPVTPTYY495 pKa = 10.65EE496 pKa = 3.85SGNTVVFIPVLVDD509 pKa = 5.16FSAGEE514 pKa = 4.19SVTISGLALDD524 pKa = 4.75SATLSPSSGYY534 pKa = 10.91LEE536 pKa = 4.75LSVDD540 pKa = 4.77GGTTWVSVDD549 pKa = 3.68DD550 pKa = 4.47KK551 pKa = 11.67VIVLQGSSYY560 pKa = 11.01VWDD563 pKa = 4.66GDD565 pKa = 3.96TSTSWTDD572 pKa = 3.19GNNWQGGVAPPDD584 pKa = 4.2DD585 pKa = 3.94GTAEE589 pKa = 3.83ITLPAGCTYY598 pKa = 10.56YY599 pKa = 10.06PQLVSGEE606 pKa = 4.39SHH608 pKa = 5.76TVAQVVVTTGGSLTLDD624 pKa = 3.77AGSSLAVNGGLQDD637 pKa = 4.25DD638 pKa = 4.68GAVTVSGTLTVSGLLTVTGSLEE660 pKa = 4.13VQGGGSVSAGTVSSGGTIQSAGDD683 pKa = 3.24ITTGDD688 pKa = 3.67FTSTGSFTSTGVNTITASGDD708 pKa = 3.29VSISGTFSDD717 pKa = 4.69PSARR721 pKa = 11.84CTLTMSGPSTSLTSSQALGNLVLSGTASVGLGSSLSLAGGLSVPPGTTLDD771 pKa = 3.52AAGFDD776 pKa = 3.56VDD778 pKa = 3.77VAGTVTVGGMFDD790 pKa = 3.4ALGITLTVGGDD801 pKa = 3.44LSVTGTLTLTGATCVLDD818 pKa = 3.88GAGSQDD824 pKa = 3.38VTLGGAQPATLRR836 pKa = 11.84VANTGGVVRR845 pKa = 11.84FTDD848 pKa = 3.93AVTTDD853 pKa = 3.3TLQVVSAGSVTFEE866 pKa = 4.47GDD868 pKa = 3.42LTVNTSASLAAAGYY882 pKa = 10.36DD883 pKa = 3.39LAFNAGAGGQTTSFPGGITFPHH905 pKa = 6.51TGSLGLGNAAADD917 pKa = 3.76SFQAAGILTATACSSVQLGGTVSTAGAGGDD947 pKa = 3.77VSLGDD952 pKa = 3.84ADD954 pKa = 4.24TPVTLAADD962 pKa = 3.89TTVDD966 pKa = 3.26AGTGGVTLGGTVDD979 pKa = 3.38GGYY982 pKa = 10.64VLTVSAGGAVSFGGVVGGVTALAGLDD1008 pKa = 3.45ASGGSIVVGGDD1019 pKa = 3.23VVATGDD1025 pKa = 3.65VVMGGPVVLGADD1037 pKa = 3.46VVVDD1041 pKa = 3.68TSGGSGDD1048 pKa = 3.74VVFSSTVDD1056 pKa = 2.99GGYY1059 pKa = 10.59VLTVRR1064 pKa = 11.84AGGAVSFGGAVGGVTALAGLDD1085 pKa = 3.44ASGGSIAVGGDD1096 pKa = 3.37VVATGDD1102 pKa = 3.65VVMGGPVVLGADD1114 pKa = 3.46VVVDD1118 pKa = 3.68TSGGSGDD1125 pKa = 3.74VVFSSTVDD1133 pKa = 3.48GTWALTVQGGTGNIVFSGDD1152 pKa = 3.01IGGTTPLGALTIVSGAQVDD1171 pKa = 3.94LGGSVYY1177 pKa = 10.66TSDD1180 pKa = 4.55ADD1182 pKa = 4.11LSIAPPVRR1190 pKa = 11.84LTSAATDD1197 pKa = 3.14VWIEE1201 pKa = 4.02PGTGNITFGTTVEE1214 pKa = 4.4DD1215 pKa = 4.14SGSGAHH1221 pKa = 6.53NLILVGGGNLTFSGDD1236 pKa = 3.29VGATNEE1242 pKa = 4.03PAYY1245 pKa = 10.72LILDD1249 pKa = 3.51IAGDD1253 pKa = 3.62ITISGNVRR1261 pKa = 11.84AGNFVLYY1268 pKa = 10.65NGTVFLNGNTIEE1280 pKa = 4.36TTTGDD1285 pKa = 3.37VVLFGPAYY1293 pKa = 10.53GEE1295 pKa = 4.87DD1296 pKa = 4.01DD1297 pKa = 4.38PEE1299 pKa = 4.33TTPVDD1304 pKa = 3.62TNFRR1308 pKa = 11.84YY1309 pKa = 9.94PDD1311 pKa = 3.56MAGLAAVYY1319 pKa = 10.41DD1320 pKa = 4.19PGSYY1324 pKa = 10.75DD1325 pKa = 3.4GTFDD1329 pKa = 3.57AASLGGSTIDD1339 pKa = 3.59VGQNFYY1345 pKa = 11.73ANGVDD1350 pKa = 4.98LSASSAWTLDD1360 pKa = 3.09IPDD1363 pKa = 3.92NSASQRR1369 pKa = 11.84IAYY1372 pKa = 6.85PVPGGAYY1379 pKa = 7.36GTGSGTYY1386 pKa = 9.89AVAYY1390 pKa = 8.71NCTVAYY1396 pKa = 10.47SNAGPGVVSASTGNGNTDD1414 pKa = 2.97GGNNSGWDD1422 pKa = 3.7FTPPAIGATVEE1433 pKa = 4.25TLSDD1437 pKa = 3.54NVLHH1441 pKa = 5.57VTFSEE1446 pKa = 4.43DD1447 pKa = 3.35LEE1449 pKa = 4.38NSNGEE1454 pKa = 3.55ITAAVQAGLIRR1465 pKa = 11.84FHH1467 pKa = 7.43DD1468 pKa = 4.43GSGTYY1473 pKa = 9.83TFDD1476 pKa = 4.51EE1477 pKa = 5.3VYY1479 pKa = 10.7QDD1481 pKa = 3.83AACTIPLPPGDD1492 pKa = 3.57TDD1494 pKa = 3.7EE1495 pKa = 5.78FYY1497 pKa = 11.44LKK1499 pKa = 10.14ATGPNEE1505 pKa = 3.75AWNTDD1510 pKa = 2.95ATGADD1515 pKa = 3.95PGDD1518 pKa = 4.27ADD1520 pKa = 3.84STDD1523 pKa = 3.01TGGTHH1528 pKa = 5.7RR1529 pKa = 11.84TLVPRR1534 pKa = 11.84LYY1536 pKa = 9.96IEE1538 pKa = 4.41KK1539 pKa = 10.49GALFDD1544 pKa = 4.77AGKK1547 pKa = 10.42NPIGPYY1553 pKa = 9.62GINGGGPDD1561 pKa = 3.44TSAVDD1566 pKa = 3.36KK1567 pKa = 10.92APPVLYY1573 pKa = 10.13KK1574 pKa = 10.46VEE1576 pKa = 4.06YY1577 pKa = 10.61GRR1579 pKa = 11.84ADD1581 pKa = 3.32PAAAANTDD1589 pKa = 3.61YY1590 pKa = 10.99HH1591 pKa = 5.81GHH1593 pKa = 6.01NFFHH1597 pKa = 7.38LYY1599 pKa = 10.19YY1600 pKa = 9.99SEE1602 pKa = 4.02QVTIGTLGTGAANEE1616 pKa = 4.07RR1617 pKa = 11.84SEE1619 pKa = 5.76DD1620 pKa = 3.75SITNKK1625 pKa = 10.59GGDD1628 pKa = 3.45IEE1630 pKa = 6.06DD1631 pKa = 4.46DD1632 pKa = 3.94GGTHH1636 pKa = 6.73LVVEE1640 pKa = 5.73GYY1642 pKa = 10.48FSIDD1646 pKa = 3.01FGAPVSMEE1654 pKa = 3.74RR1655 pKa = 11.84GVRR1658 pKa = 11.84PGTPGGNSSNALYY1671 pKa = 8.19RR1672 pKa = 11.84TLPGLITSPDD1682 pKa = 3.44HH1683 pKa = 5.92EE1684 pKa = 4.46VVIFLSGYY1692 pKa = 10.17HH1693 pKa = 7.37DD1694 pKa = 3.69GTGWPGWHH1702 pKa = 6.55RR1703 pKa = 11.84NVPDD1707 pKa = 4.15PAGGTIDD1714 pKa = 3.73EE1715 pKa = 4.72VYY1717 pKa = 11.0DD1718 pKa = 3.88LGGQIEE1724 pKa = 4.94DD1725 pKa = 3.91NSPANNPLDD1734 pKa = 3.81TSVLPTFVLSSTGSFDD1750 pKa = 5.67LDD1752 pKa = 3.22WDD1754 pKa = 3.74VDD1756 pKa = 4.16PPALAPYY1763 pKa = 8.54TLAAGRR1769 pKa = 11.84YY1770 pKa = 8.18EE1771 pKa = 4.19GVTIDD1776 pKa = 3.79SDD1778 pKa = 3.61WNGRR1782 pKa = 11.84IDD1784 pKa = 5.23RR1785 pKa = 11.84IDD1787 pKa = 3.43FHH1789 pKa = 8.72FLDD1792 pKa = 5.41DD1793 pKa = 5.98GSAPWDD1799 pKa = 3.64SSTDD1803 pKa = 3.48HH1804 pKa = 7.58PDD1806 pKa = 3.17SQGGIRR1812 pKa = 11.84DD1813 pKa = 3.3ILLNYY1818 pKa = 9.73PGDD1821 pKa = 3.87SLNEE1825 pKa = 3.74LEE1827 pKa = 4.68AFMVGEE1833 pKa = 4.22TGGGSFVSTYY1843 pKa = 9.61NQAYY1847 pKa = 6.96GTGVDD1852 pKa = 3.3NSLFGGSISISDD1864 pKa = 4.07DD1865 pKa = 3.68PYY1867 pKa = 11.26FSLSLSSSAPWGLLTDD1883 pKa = 3.64ISVRR1887 pKa = 11.84YY1888 pKa = 9.47DD1889 pKa = 3.01HH1890 pKa = 6.82TKK1892 pKa = 10.76AYY1894 pKa = 9.08LTDD1897 pKa = 3.59LAGNLLEE1904 pKa = 6.19DD1905 pKa = 4.63IDD1907 pKa = 4.47PEE1909 pKa = 4.3VPIIEE1914 pKa = 4.2RR1915 pKa = 11.84VPPRR1919 pKa = 11.84IVFSLARR1926 pKa = 11.84AGDD1929 pKa = 3.69DD1930 pKa = 3.04KK1931 pKa = 11.71VYY1933 pKa = 10.95LRR1935 pKa = 11.84FSEE1938 pKa = 4.56PVFGDD1943 pKa = 3.53TAASVEE1949 pKa = 3.76IDD1951 pKa = 3.22AADD1954 pKa = 3.71FTVTGATGVLTVTGLQILTRR1974 pKa = 11.84WPANTTGAWEE1984 pKa = 4.51AYY1986 pKa = 10.12LLLAQPLTADD1996 pKa = 4.01DD1997 pKa = 4.22VVQGTVRR2004 pKa = 11.84ANANAVYY2011 pKa = 10.03DD2012 pKa = 4.15PSGNAMDD2019 pKa = 4.75PADD2022 pKa = 3.73IFRR2025 pKa = 11.84ITNVGLGVVSPLWATDD2041 pKa = 3.54GVHH2044 pKa = 6.63ADD2046 pKa = 3.67EE2047 pKa = 5.23VGGSSLRR2054 pKa = 11.84GFDD2057 pKa = 3.68GSGALLPRR2065 pKa = 11.84DD2066 pKa = 3.21ITLQARR2072 pKa = 11.84ILAPSISGDD2081 pKa = 3.5AMLLVYY2087 pKa = 10.51DD2088 pKa = 4.36VDD2090 pKa = 4.41PDD2092 pKa = 3.17ASYY2095 pKa = 12.11YY2096 pKa = 7.38MTTDD2100 pKa = 3.09EE2101 pKa = 4.43YY2102 pKa = 11.69NRR2104 pKa = 11.84TTFPDD2109 pKa = 3.18MWWPVSLPGLKK2120 pKa = 8.47NTANTEE2126 pKa = 3.8ARR2128 pKa = 11.84TVSPFSSQGALRR2140 pKa = 11.84TFLIPGTDD2148 pKa = 3.16PEE2150 pKa = 4.25MRR2152 pKa = 11.84EE2153 pKa = 4.05GGTVEE2158 pKa = 3.69FLFYY2162 pKa = 10.34IDD2164 pKa = 4.41NLYY2167 pKa = 10.36CARR2170 pKa = 11.84LTDD2173 pKa = 3.88EE2174 pKa = 5.37DD2175 pKa = 4.51DD2176 pKa = 4.02PRR2178 pKa = 11.84TIAPWSFGLSGLKK2191 pKa = 8.27EE2192 pKa = 3.69QRR2194 pKa = 11.84AGVTILNNVINPTQGEE2210 pKa = 4.63VTVVNYY2216 pKa = 10.19RR2217 pKa = 11.84LSRR2220 pKa = 11.84AGMVTIQVFALDD2232 pKa = 3.83GSLVRR2237 pKa = 11.84TLQRR2241 pKa = 11.84GVQGPGAYY2249 pKa = 8.15TVAWDD2254 pKa = 3.59GRR2256 pKa = 11.84NGSGRR2261 pKa = 11.84VVARR2265 pKa = 11.84GLYY2268 pKa = 9.33FIRR2271 pKa = 11.84VVGPGIDD2278 pKa = 3.59EE2279 pKa = 4.04YY2280 pKa = 11.29RR2281 pKa = 11.84KK2282 pKa = 10.45VMVVKK2287 pKa = 10.73

Molecular weight:
232.97 kDa
Isoelectric point according different methods:






Protein with the highest isoelectric point:
>tr|G0GE59|G0GE59_SPITZ Permease YjgP/YjgQ family protein OS=Spirochaeta thermophila (strain ATCC 700085 / DSM 6578 / Z-1203) OX=869211 GN=Spith_1140 PE=4 SV=1
MM1 pKa = 7.6ICTTLSRR8 pKa = 11.84LLGFVRR14 pKa = 11.84VGVVAAVFGASGKK27 pKa = 10.63ADD29 pKa = 3.31VLNAVFNIPNNLRR42 pKa = 11.84KK43 pKa = 10.08LMAEE47 pKa = 4.33GALSSAFIPVLTQTHH62 pKa = 4.84QQDD65 pKa = 3.17PSGRR69 pKa = 11.84VSRR72 pKa = 11.84RR73 pKa = 11.84LMSTILGFQIIVLVPLIAAGIAGARR98 pKa = 11.84TIVPVLLDD106 pKa = 3.83FPDD109 pKa = 4.48PGKK112 pKa = 9.56MALSISLFRR121 pKa = 11.84WFLPYY126 pKa = 10.26TFLVSISAVLMGTLNSHH143 pKa = 6.28HH144 pKa = 7.03RR145 pKa = 11.84FFIPAVTPLLFSLSVIGCILLAGNRR170 pKa = 11.84LDD172 pKa = 3.87VYY174 pKa = 11.68AMALGVLIGGMMQILFQIPSILRR197 pKa = 11.84RR198 pKa = 11.84GYY200 pKa = 10.11SLIPNLHH207 pKa = 5.89FHH209 pKa = 7.4DD210 pKa = 4.65PPFRR214 pKa = 11.84EE215 pKa = 4.44VLRR218 pKa = 11.84LWGPIVASSSLLVIDD233 pKa = 3.68QQVAILFASGLEE245 pKa = 4.33DD246 pKa = 3.81GSTSALTNAIVFWQLPFGIFSASINTAFFPRR277 pKa = 11.84FAQDD281 pKa = 3.09ALDD284 pKa = 3.74RR285 pKa = 11.84TKK287 pKa = 10.26TALRR291 pKa = 11.84SSVEE295 pKa = 3.9QGLLALGFFLLPASLAMGILSHH317 pKa = 7.31DD318 pKa = 4.42IISAALQRR326 pKa = 11.84GAFLSSHH333 pKa = 5.97TEE335 pKa = 3.31MTAQVLRR342 pKa = 11.84AYY344 pKa = 10.21LPGMFFVGSFNLLQRR359 pKa = 11.84VSYY362 pKa = 11.0SKK364 pKa = 11.34GEE366 pKa = 4.14SVKK369 pKa = 10.7PFILVFLVVALDD381 pKa = 3.54ILLSFILKK389 pKa = 7.34EE390 pKa = 3.87TSLRR394 pKa = 11.84VAGLALAHH402 pKa = 6.3SLSFFTGSILLFLLTARR419 pKa = 11.84EE420 pKa = 4.22LEE422 pKa = 4.68GFPSPQFTRR431 pKa = 11.84EE432 pKa = 3.84LGKK435 pKa = 9.61MVAALIPFGIVLWGVRR451 pKa = 11.84VFLGDD456 pKa = 3.08RR457 pKa = 11.84WRR459 pKa = 11.84EE460 pKa = 3.79GSSFSYY466 pKa = 10.45FLLVGLLIIGSAVLILLMYY485 pKa = 10.75RR486 pKa = 11.84LFRR489 pKa = 11.84VDD491 pKa = 3.44LSKK494 pKa = 10.91RR495 pKa = 11.84IPLRR499 pKa = 11.84RR500 pKa = 11.84NRR502 pKa = 3.71

Molecular weight:
54.92 kDa
Isoelectric point according different methods:






Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

2249

0

2249

788271

31

2848

350.5

39.17

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

8.142 ± 0.052

0.821 ± 0.019

4.755 ± 0.041

8.365 ± 0.072

4.183 ± 0.031

8.188 ± 0.062

2.18 ± 0.029

5.231 ± 0.044

3.749 ± 0.045

11.178 ± 0.073

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.139 ± 0.022

2.091 ± 0.03

5.182 ± 0.045

2.62 ± 0.029

7.667 ± 0.075

5.537 ± 0.042

4.952 ± 0.062

8.344 ± 0.057

1.423 ± 0.025

3.252 ± 0.035

Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski