Arracacha virus V

Taxonomy: Viruses; Riboviria; Orthornavirae; Kitrinoviricota; Alsuviricetes; Tymovirales; Betaflexiviridae; Trivirinae; Vitivirus

Average proteome isoelectric point is 7.05

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 4 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    

Protein with the lowest isoelectric point:
>tr|A0A1V0JB96|A0A1V0JB96_9VIRU Putative nucleic-acid binding protein OS=Arracacha virus V OX=1972716 PE=4 SV=1
MM1 pKa = 7.03SVSVSSHH8 pKa = 5.03RR9 pKa = 11.84VACATLFSNGDD20 pKa = 3.39QEE22 pKa = 4.97GVAEE26 pKa = 4.17IKK28 pKa = 10.32KK29 pKa = 10.43LKK31 pKa = 9.93TSGLLAAEE39 pKa = 4.33VRR41 pKa = 11.84SDD43 pKa = 3.66GLFDD47 pKa = 4.48YY48 pKa = 10.88YY49 pKa = 11.48VEE51 pKa = 4.09DD52 pKa = 4.64HH53 pKa = 6.68IRR55 pKa = 11.84DD56 pKa = 3.8YY57 pKa = 11.29LSSIGVHH64 pKa = 5.24TSVNSFRR71 pKa = 11.84CHH73 pKa = 4.82SHH75 pKa = 7.32PISKK79 pKa = 9.23MLEE82 pKa = 3.49NHH84 pKa = 6.06ILVNVFSHH92 pKa = 6.17YY93 pKa = 10.16LRR95 pKa = 11.84KK96 pKa = 10.01KK97 pKa = 10.4NLFVSCRR104 pKa = 11.84NSKK107 pKa = 10.21INAVLKK113 pKa = 10.38NNKK116 pKa = 9.57ANVSFEE122 pKa = 3.9HH123 pKa = 6.25YY124 pKa = 10.65NRR126 pKa = 11.84FVHH129 pKa = 6.93AKK131 pKa = 9.97DD132 pKa = 3.16PLRR135 pKa = 11.84YY136 pKa = 8.33TEE138 pKa = 5.32FIKK141 pKa = 10.87EE142 pKa = 3.87LDD144 pKa = 3.77YY145 pKa = 11.77SFMPALVKK153 pKa = 10.22KK154 pKa = 10.14AQGAEE159 pKa = 3.75VCFIHH164 pKa = 7.73DD165 pKa = 3.84EE166 pKa = 3.99VHH168 pKa = 5.79YY169 pKa = 10.24WSLEE173 pKa = 3.81NFQDD177 pKa = 3.95FLGHH181 pKa = 6.6LEE183 pKa = 4.26CEE185 pKa = 4.02QVIYY189 pKa = 10.79SIVYY193 pKa = 8.83PVEE196 pKa = 3.72IQMGIPFSLNPQLYY210 pKa = 8.14EE211 pKa = 5.08FEE213 pKa = 5.93DD214 pKa = 3.72EE215 pKa = 4.58GQGSFRR221 pKa = 11.84WFPDD225 pKa = 3.07GKK227 pKa = 10.79ASGSYY232 pKa = 8.79VQPTNPWLLTTSKK245 pKa = 9.85TEE247 pKa = 4.0DD248 pKa = 3.01SRR250 pKa = 11.84LRR252 pKa = 11.84GWSITKK258 pKa = 10.27LEE260 pKa = 4.36SFGAHH265 pKa = 5.24HH266 pKa = 6.78VFLATRR272 pKa = 11.84GVCTNDD278 pKa = 4.8KK279 pKa = 10.17RR280 pKa = 11.84DD281 pKa = 3.74CYY283 pKa = 11.6NDD285 pKa = 4.02FACINPLSFCSKK297 pKa = 8.24VCRR300 pKa = 11.84GMRR303 pKa = 11.84RR304 pKa = 11.84IRR306 pKa = 11.84SSLAKK311 pKa = 10.24EE312 pKa = 3.97VFTYY316 pKa = 11.06LLALRR321 pKa = 11.84KK322 pKa = 9.51PEE324 pKa = 4.14PQSAVAKK331 pKa = 9.49IRR333 pKa = 11.84QMSKK337 pKa = 10.28GNIMEE342 pKa = 4.41DD343 pKa = 3.09EE344 pKa = 4.15IMFLGLVARR353 pKa = 11.84KK354 pKa = 8.64LQGMNIFVDD363 pKa = 4.02KK364 pKa = 10.66KK365 pKa = 10.01NSSINEE371 pKa = 3.78FSLLEE376 pKa = 4.23LFTDD380 pKa = 3.73VLMAGLGEE388 pKa = 4.19KK389 pKa = 10.53ASLFLFQKK397 pKa = 10.48RR398 pKa = 11.84KK399 pKa = 9.25IAADD403 pKa = 3.63LQGLLGFLAPAEE415 pKa = 4.15FKK417 pKa = 10.19VDD419 pKa = 2.98KK420 pKa = 10.64VFRR423 pKa = 11.84EE424 pKa = 3.8RR425 pKa = 11.84RR426 pKa = 11.84IKK428 pKa = 10.42KK429 pKa = 8.45VIYY432 pKa = 9.89RR433 pKa = 11.84ISEE436 pKa = 4.13PVLSEE441 pKa = 3.76STMDD445 pKa = 3.41EE446 pKa = 4.43EE447 pKa = 5.73LNGDD451 pKa = 4.68LILNEE456 pKa = 3.45IRR458 pKa = 11.84RR459 pKa = 11.84NGRR462 pKa = 11.84EE463 pKa = 3.65PAPYY467 pKa = 10.22DD468 pKa = 3.42NPAVVLPRR476 pKa = 11.84IDD478 pKa = 3.31VGLFEE483 pKa = 4.28FMEE486 pKa = 4.41YY487 pKa = 10.29VGRR490 pKa = 11.84LRR492 pKa = 11.84NFYY495 pKa = 10.59RR496 pKa = 11.84NPPKK500 pKa = 10.45AYY502 pKa = 7.51EE503 pKa = 4.22SPVIFHH509 pKa = 7.22NDD511 pKa = 3.08LKK513 pKa = 11.48NPMSKK518 pKa = 10.43CFVWVSKK525 pKa = 10.21EE526 pKa = 3.48WGLVRR531 pKa = 11.84EE532 pKa = 4.48VKK534 pKa = 10.65LIAGINDD541 pKa = 3.28EE542 pKa = 4.41DD543 pKa = 4.08SLRR546 pKa = 11.84NGLITHH552 pKa = 6.37EE553 pKa = 4.95EE554 pKa = 3.87YY555 pKa = 10.85LQRR558 pKa = 11.84KK559 pKa = 8.12NLDD562 pKa = 3.28NGQKK566 pKa = 10.41SNEE569 pKa = 3.61VSQRR573 pKa = 11.84TKK575 pKa = 10.62EE576 pKa = 3.71ITSNKK581 pKa = 9.84EE582 pKa = 3.29GGTDD586 pKa = 4.42KK587 pKa = 11.0IEE589 pKa = 4.96CICGMGFEE597 pKa = 4.49VGNFKK602 pKa = 10.87GRR604 pKa = 11.84GLEE607 pKa = 3.87LTRR610 pKa = 11.84GDD612 pKa = 3.44KK613 pKa = 10.76LKK615 pKa = 10.94NRR617 pKa = 11.84EE618 pKa = 3.34AWFFSRR624 pKa = 11.84SGEE627 pKa = 4.33SYY629 pKa = 10.04SYY631 pKa = 10.44TGASHH636 pKa = 7.67ASRR639 pKa = 11.84GWPTEE644 pKa = 3.65LNTLINSLGYY654 pKa = 10.19EE655 pKa = 4.1STSFDD660 pKa = 3.01HH661 pKa = 7.32CLVQRR666 pKa = 11.84YY667 pKa = 8.32DD668 pKa = 3.54AGAEE672 pKa = 4.09LKK674 pKa = 10.3LHH676 pKa = 6.99KK677 pKa = 10.46DD678 pKa = 3.4NEE680 pKa = 4.61SCYY683 pKa = 9.86PAGNSILTWNQSGSCTFNIEE703 pKa = 4.2CKK705 pKa = 9.47QGSMKK710 pKa = 10.13IVLEE714 pKa = 4.5EE715 pKa = 4.47GDD717 pKa = 4.45HH718 pKa = 8.34LMMPNGCQTSHH729 pKa = 5.64RR730 pKa = 11.84HH731 pKa = 5.06GVSGCTNSRR740 pKa = 11.84TSYY743 pKa = 9.25TFRR746 pKa = 11.84STKK749 pKa = 9.91VHH751 pKa = 6.76DD752 pKa = 4.02PEE754 pKa = 6.55GPLRR758 pKa = 11.84VLEE761 pKa = 4.19EE762 pKa = 3.83QSEE765 pKa = 4.64GSISSYY771 pKa = 9.88EE772 pKa = 4.1EE773 pKa = 3.54EE774 pKa = 5.39DD775 pKa = 3.85EE776 pKa = 5.01EE777 pKa = 4.93EE778 pKa = 4.1DD779 pKa = 3.81TAVGGLTKK787 pKa = 10.37GRR789 pKa = 11.84KK790 pKa = 8.61VCALNALSAHH800 pKa = 6.74LGLNHH805 pKa = 5.68EE806 pKa = 4.53TIIAKK811 pKa = 10.03VLGEE815 pKa = 4.37DD816 pKa = 3.58KK817 pKa = 10.77RR818 pKa = 11.84AALALKK824 pKa = 10.42SGGVSLSTLMRR835 pKa = 11.84CCKK838 pKa = 10.23ALSLSGCVHH847 pKa = 6.29SEE849 pKa = 3.77FGGFRR854 pKa = 11.84MDD856 pKa = 3.97GVVKK860 pKa = 10.2EE861 pKa = 3.94INLYY865 pKa = 10.43VEE867 pKa = 4.54GDD869 pKa = 3.63HH870 pKa = 7.23VEE872 pKa = 4.09LSDD875 pKa = 4.45RR876 pKa = 11.84VCTSRR881 pKa = 11.84GLKK884 pKa = 10.09SAMLLNPEE892 pKa = 4.16TSVVTFSAKK901 pKa = 9.99KK902 pKa = 9.37EE903 pKa = 3.95YY904 pKa = 10.9AKK906 pKa = 11.04NLVNAFTAHH915 pKa = 5.18EE916 pKa = 4.18TGVVIKK922 pKa = 9.55EE923 pKa = 4.2KK924 pKa = 10.99LMGAHH929 pKa = 7.12LEE931 pKa = 4.2SCEE934 pKa = 3.94QEE936 pKa = 3.88IMMSCGFAGSGKK948 pKa = 8.62SHH950 pKa = 5.6YY951 pKa = 8.12TQTVLSFEE959 pKa = 4.79SSPQTLIISPRR970 pKa = 11.84KK971 pKa = 9.25ALKK974 pKa = 10.49LDD976 pKa = 3.43WQKK979 pKa = 11.3KK980 pKa = 5.46VHH982 pKa = 6.56KK983 pKa = 10.13KK984 pKa = 9.38HH985 pKa = 6.57ACEE988 pKa = 4.05TYY990 pKa = 10.08EE991 pKa = 3.85KK992 pKa = 11.12ALFSLHH998 pKa = 6.0KK999 pKa = 9.73FKK1001 pKa = 11.27NVVVDD1006 pKa = 5.12EE1007 pKa = 4.63IDD1009 pKa = 3.99LFPEE1013 pKa = 5.84GYY1015 pKa = 10.67LDD1017 pKa = 5.54FIVCASDD1024 pKa = 3.52WEE1026 pKa = 4.69CVVVLGDD1033 pKa = 3.88PLQAQYY1039 pKa = 11.65YY1040 pKa = 8.66NQDD1043 pKa = 3.33DD1044 pKa = 3.94RR1045 pKa = 11.84LKK1047 pKa = 11.21LGGTPDD1053 pKa = 2.91IFSRR1057 pKa = 11.84LCGTVNYY1064 pKa = 10.68LMYY1067 pKa = 10.46SYY1069 pKa = 11.1RR1070 pKa = 11.84LPTNQNLFEE1079 pKa = 4.67INCYY1083 pKa = 10.7GDD1085 pKa = 4.66GNAQSKK1091 pKa = 10.78KK1092 pKa = 10.16KK1093 pKa = 10.03DD1094 pKa = 3.49AQVLVCSRR1102 pKa = 11.84EE1103 pKa = 4.03GLVGRR1108 pKa = 11.84DD1109 pKa = 2.92KK1110 pKa = 11.19AYY1112 pKa = 9.54TVGEE1116 pKa = 4.18SQGLSFQDD1124 pKa = 3.04VRR1126 pKa = 11.84LIEE1129 pKa = 4.89DD1130 pKa = 3.22KK1131 pKa = 11.03GLRR1134 pKa = 11.84HH1135 pKa = 6.19IKK1137 pKa = 10.24NGTMMVAMTRR1147 pKa = 11.84SRR1149 pKa = 11.84NSFMVDD1155 pKa = 2.67AKK1157 pKa = 9.83KK1158 pKa = 8.24TQGCSFLNAVQNGRR1172 pKa = 11.84RR1173 pKa = 11.84ITLSEE1178 pKa = 4.2LKK1180 pKa = 10.5SEE1182 pKa = 4.16LSLRR1186 pKa = 11.84LKK1188 pKa = 10.69SFNCHH1193 pKa = 4.66YY1194 pKa = 10.87SPYY1197 pKa = 9.94LVSNMEE1203 pKa = 4.43SIEE1206 pKa = 4.14EE1207 pKa = 4.01KK1208 pKa = 10.58LANDD1212 pKa = 4.57PYY1214 pKa = 11.63LLGLGNLCFDD1224 pKa = 4.99DD1225 pKa = 4.98EE1226 pKa = 4.8FEE1228 pKa = 4.22QEE1230 pKa = 3.91EE1231 pKa = 4.33MAEE1234 pKa = 3.97EE1235 pKa = 4.4WSAEE1239 pKa = 3.87EE1240 pKa = 4.81AMRR1243 pKa = 11.84THH1245 pKa = 7.11LFISEE1250 pKa = 4.23EE1251 pKa = 4.45SNTLYY1256 pKa = 11.06SSTLKK1261 pKa = 10.72GKK1263 pKa = 7.56EE1264 pKa = 3.43EE1265 pKa = 3.87RR1266 pKa = 11.84EE1267 pKa = 4.15YY1268 pKa = 11.27VSEE1271 pKa = 4.19HH1272 pKa = 6.26TGSSDD1277 pKa = 3.81QIDD1280 pKa = 3.98DD1281 pKa = 3.73VGSTRR1286 pKa = 11.84EE1287 pKa = 3.86FTMVGPLSYY1296 pKa = 10.38RR1297 pKa = 11.84SRR1299 pKa = 11.84YY1300 pKa = 9.28LDD1302 pKa = 3.89HH1303 pKa = 7.07KK1304 pKa = 10.37HH1305 pKa = 6.95ADD1307 pKa = 3.38DD1308 pKa = 3.7TTFFMSVKK1316 pKa = 9.93KK1317 pKa = 10.35RR1318 pKa = 11.84LRR1320 pKa = 11.84FADD1323 pKa = 3.36YY1324 pKa = 10.52EE1325 pKa = 4.34RR1326 pKa = 11.84NKK1328 pKa = 10.33RR1329 pKa = 11.84SYY1331 pKa = 9.05EE1332 pKa = 3.87RR1333 pKa = 11.84KK1334 pKa = 8.63VCYY1337 pKa = 10.01GEE1339 pKa = 3.9QMFRR1343 pKa = 11.84KK1344 pKa = 8.4MRR1346 pKa = 11.84EE1347 pKa = 3.83FLGMPDD1353 pKa = 4.17SPWVSPLEE1361 pKa = 4.09ASEE1364 pKa = 4.29QEE1366 pKa = 4.67FIQKK1370 pKa = 10.05RR1371 pKa = 11.84AQKK1374 pKa = 10.21ASKK1377 pKa = 10.19LIAAHH1382 pKa = 5.87QDD1384 pKa = 2.91RR1385 pKa = 11.84SDD1387 pKa = 3.98PDD1389 pKa = 3.2WPSNYY1394 pKa = 9.76VKK1396 pKa = 10.48IFLKK1400 pKa = 10.52QQLCTKK1406 pKa = 8.49MEE1408 pKa = 3.97KK1409 pKa = 10.2RR1410 pKa = 11.84GVDD1413 pKa = 3.29AKK1415 pKa = 10.8AGQLIACFSHH1425 pKa = 6.17SVLYY1429 pKa = 10.61RR1430 pKa = 11.84FGAIIRR1436 pKa = 11.84QSEE1439 pKa = 4.13KK1440 pKa = 10.42TMSNLLPQNWLIFTQKK1456 pKa = 10.19RR1457 pKa = 11.84FEE1459 pKa = 6.38DD1460 pKa = 3.43LDD1462 pKa = 3.85EE1463 pKa = 4.23WCKK1466 pKa = 10.72EE1467 pKa = 3.72HH1468 pKa = 6.26MTEE1471 pKa = 5.42QVGTDD1476 pKa = 3.01SDD1478 pKa = 4.56YY1479 pKa = 11.65EE1480 pKa = 4.3AFDD1483 pKa = 3.45QSQDD1487 pKa = 3.09GTILAFEE1494 pKa = 4.36VALLRR1499 pKa = 11.84YY1500 pKa = 7.8LHH1502 pKa = 6.34WPEE1505 pKa = 4.21EE1506 pKa = 3.99LVEE1509 pKa = 4.34EE1510 pKa = 4.26YY1511 pKa = 10.85KK1512 pKa = 10.62EE1513 pKa = 4.03LKK1515 pKa = 10.84LMIGCKK1521 pKa = 9.95LGSLQVMRR1529 pKa = 11.84FSGEE1533 pKa = 3.56FGTFFLNTCCNIAYY1547 pKa = 9.08TIMRR1551 pKa = 11.84YY1552 pKa = 9.56EE1553 pKa = 4.16ITPEE1557 pKa = 3.88TPIAFAGDD1565 pKa = 3.79DD1566 pKa = 3.61MFSPRR1571 pKa = 11.84VLTVSHH1577 pKa = 6.98AYY1579 pKa = 10.33DD1580 pKa = 4.13HH1581 pKa = 6.88FIEE1584 pKa = 4.63DD1585 pKa = 3.32KK1586 pKa = 11.07KK1587 pKa = 10.82IIKK1590 pKa = 9.84LVAKK1594 pKa = 10.01VRR1596 pKa = 11.84VSRR1599 pKa = 11.84DD1600 pKa = 3.16PLFCGWRR1607 pKa = 11.84MTVYY1611 pKa = 10.88GIIKK1615 pKa = 10.02DD1616 pKa = 3.83PNLLLDD1622 pKa = 3.49RR1623 pKa = 11.84WKK1625 pKa = 11.03AAIEE1629 pKa = 3.98KK1630 pKa = 10.51GNLKK1634 pKa = 10.42EE1635 pKa = 5.37CMDD1638 pKa = 4.17NYY1640 pKa = 11.15ALEE1643 pKa = 4.33ASFGYY1648 pKa = 10.07RR1649 pKa = 11.84VGDD1652 pKa = 3.48NLYY1655 pKa = 11.02DD1656 pKa = 4.65LDD1658 pKa = 5.17IDD1660 pKa = 5.38LDD1662 pKa = 3.98AQSEE1666 pKa = 4.3LTRR1669 pKa = 11.84RR1670 pKa = 11.84IIKK1673 pKa = 9.93HH1674 pKa = 4.68KK1675 pKa = 9.25HH1676 pKa = 3.86QLSRR1680 pKa = 11.84GVAEE1684 pKa = 4.43IFSGSGDD1691 pKa = 3.58VASDD1695 pKa = 4.76EE1696 pKa = 4.06EE1697 pKa = 4.91DD1698 pKa = 2.93DD1699 pKa = 3.96WKK1701 pKa = 11.27FLFHH1705 pKa = 7.4

Molecular weight:
194.0 kDa
Isoelectric point according different methods:






Protein with the highest isoelectric point:
>tr|A0A1V0JB98|A0A1V0JB98_9VIRU Movement protein OS=Arracacha virus V OX=1972716 PE=4 SV=1
MM1 pKa = 7.78GEE3 pKa = 4.16PFLGNSKK10 pKa = 10.44SSAKK14 pKa = 9.85RR15 pKa = 11.84RR16 pKa = 11.84ARR18 pKa = 11.84RR19 pKa = 11.84HH20 pKa = 5.51DD21 pKa = 3.43RR22 pKa = 11.84CLKK25 pKa = 10.38CGAISHH31 pKa = 7.07LSKK34 pKa = 10.87CKK36 pKa = 9.93QLPSASQMEE45 pKa = 4.55CQSYY49 pKa = 10.01LVSGPNRR56 pKa = 11.84FKK58 pKa = 10.57TEE60 pKa = 3.71RR61 pKa = 11.84PHH63 pKa = 6.25WSNVDD68 pKa = 3.36WLCLRR73 pKa = 11.84DD74 pKa = 3.65AQAAGVEE81 pKa = 4.33YY82 pKa = 10.46HH83 pKa = 7.13RR84 pKa = 11.84EE85 pKa = 3.53WLLNKK90 pKa = 10.27HH91 pKa = 6.29SGNGLKK97 pKa = 9.99IKK99 pKa = 10.6SPEE102 pKa = 4.02EE103 pKa = 3.53TPEE106 pKa = 3.97YY107 pKa = 10.71YY108 pKa = 10.66NYY110 pKa = 11.44

Molecular weight:
12.67 kDa
Isoelectric point according different methods:






Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

4

0

4

2300

110

1705

575.0

65.1

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

5.957 ± 1.132

2.565 ± 0.257

5.304 ± 0.332

8.043 ± 0.412

4.826 ± 0.447

6.739 ± 0.314

2.609 ± 0.502

4.391 ± 0.357

7.043 ± 0.514

9.783 ± 0.425

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

3.0 ± 1.229

4.565 ± 0.581

3.174 ± 0.462

3.261 ± 0.196

5.739 ± 0.353

8.261 ± 0.754

4.13 ± 0.364

6.348 ± 0.639

1.043 ± 0.373

3.217 ± 0.713

Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski