Helicoverpa armigera granulovirus

Taxonomy: Viruses; Naldaviricetes; Lefavirales; Baculoviridae; Betabaculovirus

Average proteome isoelectric point is 6.55

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 179 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A9YMU9|A9YMU9_9BBAC Chitin-binding type-2 domain-containing protein OS=Helicoverpa armigera granulovirus OX=489830 PE=4 SV=1
MM1 pKa = 7.36FLLVLIIIVVVVIIGVVLTSNSGDD25 pKa = 3.38KK26 pKa = 11.07NNEE29 pKa = 3.71NFEE32 pKa = 4.16EE33 pKa = 4.22EE34 pKa = 4.15DD35 pKa = 3.91NKK37 pKa = 10.74FKK39 pKa = 10.97LCPPGVVGFVADD51 pKa = 3.98PTNCSSFYY59 pKa = 10.1FCPIEE64 pKa = 4.95LYY66 pKa = 10.4HH67 pKa = 6.82LCVDD71 pKa = 4.22GKK73 pKa = 11.07VFDD76 pKa = 4.83IEE78 pKa = 5.92SEE80 pKa = 4.17TCMDD84 pKa = 4.94KK85 pKa = 11.29NVIDD89 pKa = 4.64CGDD92 pKa = 3.61RR93 pKa = 11.84PYY95 pKa = 10.7TPPPII100 pKa = 4.83

Molecular weight: 11.11 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A9YMT7|A9YMT7_9BBAC 38K OS=Helicoverpa armigera granulovirus OX=489830 PE=4 SV=1
MM1 pKa = 7.42EE2 pKa = 3.98RR3 pKa = 11.84TGRR6 pKa = 11.84RR7 pKa = 11.84RR8 pKa = 11.84SRR10 pKa = 11.84SRR12 pKa = 11.84SRR14 pKa = 11.84SPQRR18 pKa = 11.84RR19 pKa = 11.84RR20 pKa = 11.84SYY22 pKa = 10.49RR23 pKa = 11.84RR24 pKa = 11.84RR25 pKa = 11.84SRR27 pKa = 11.84STSTGARR34 pKa = 11.84RR35 pKa = 11.84RR36 pKa = 11.84SRR38 pKa = 11.84SGYY41 pKa = 8.58RR42 pKa = 11.84RR43 pKa = 11.84RR44 pKa = 11.84SRR46 pKa = 11.84SGQRR50 pKa = 11.84RR51 pKa = 11.84NHH53 pKa = 5.14VNQYY57 pKa = 7.98VV58 pKa = 3.01

Molecular weight: 7.21 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

179

0

179

50360

53

1279

281.3

32.45

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

4.809 ± 0.127

2.421 ± 0.126

6.541 ± 0.125

5.447 ± 0.149

4.426 ± 0.122

3.685 ± 0.148

2.361 ± 0.088

5.866 ± 0.125

6.765 ± 0.23

9.396 ± 0.147

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.575 ± 0.094

6.91 ± 0.14

3.884 ± 0.127

3.898 ± 0.125

4.879 ± 0.151

6.35 ± 0.159

6.267 ± 0.158

7.46 ± 0.137

0.969 ± 0.053

5.089 ± 0.144
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski