Woodlouse hunter spider associated circular virus 1

Taxonomy: Viruses; unclassified viruses; unclassified DNA viruses; unclassified ssDNA viruses

Average proteome isoelectric point is 7.58

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 2 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A346BPE4|A0A346BPE4_9VIRU Putative capsid protein OS=Woodlouse hunter spider associated circular virus 1 OX=2293310 PE=4 SV=1
MM1 pKa = 7.18SRR3 pKa = 11.84SRR5 pKa = 11.84SYY7 pKa = 11.3CFTWNNYY14 pKa = 7.59PVNHH18 pKa = 6.27QDD20 pKa = 3.15VLDD23 pKa = 4.05RR24 pKa = 11.84LGYY27 pKa = 10.19RR28 pKa = 11.84YY29 pKa = 10.12VCYY32 pKa = 9.99GYY34 pKa = 10.5EE35 pKa = 3.88WAPTTRR41 pKa = 11.84TPHH44 pKa = 5.44LQGFIYY50 pKa = 10.29FRR52 pKa = 11.84DD53 pKa = 3.89AKK55 pKa = 9.65TMRR58 pKa = 11.84TVVRR62 pKa = 11.84GLPGVHH68 pKa = 6.29IEE70 pKa = 4.33SARR73 pKa = 11.84GTPAQCIEE81 pKa = 4.13YY82 pKa = 9.77CRR84 pKa = 11.84KK85 pKa = 10.26DD86 pKa = 3.29GEE88 pKa = 4.34FIEE91 pKa = 5.52FGEE94 pKa = 4.72APQTPQEE101 pKa = 3.98IGEE104 pKa = 4.28AEE106 pKa = 4.1KK107 pKa = 10.97DD108 pKa = 3.4RR109 pKa = 11.84YY110 pKa = 8.08LTAWDD115 pKa = 3.97LAKK118 pKa = 10.58AGQIDD123 pKa = 4.55EE124 pKa = 4.76IDD126 pKa = 3.63PEE128 pKa = 4.21LRR130 pKa = 11.84LRR132 pKa = 11.84HH133 pKa = 5.48YY134 pKa = 9.62STLKK138 pKa = 10.84SIAKK142 pKa = 9.74DD143 pKa = 3.54YY144 pKa = 9.92MVRR147 pKa = 11.84PPQLDD152 pKa = 3.84GVCGVWFWGPAGSGKK167 pKa = 7.33TTTANRR173 pKa = 11.84LYY175 pKa = 10.06PNAYY179 pKa = 10.13LKK181 pKa = 10.3PLNKK185 pKa = 9.14WWDD188 pKa = 3.87GYY190 pKa = 10.53QGEE193 pKa = 4.93DD194 pKa = 4.36VVICDD199 pKa = 4.68DD200 pKa = 3.25MSIFHH205 pKa = 7.21RR206 pKa = 11.84SLSDD210 pKa = 4.23LLKK213 pKa = 10.39HH214 pKa = 5.39WTDD217 pKa = 4.19FLPFIAEE224 pKa = 4.1VKK226 pKa = 10.3RR227 pKa = 11.84EE228 pKa = 4.07SVYY231 pKa = 10.3IRR233 pKa = 11.84PSKK236 pKa = 10.65FIVTSQYY243 pKa = 10.95SIEE246 pKa = 4.6EE247 pKa = 3.53IWAGDD252 pKa = 3.9EE253 pKa = 4.14KK254 pKa = 11.18SLEE257 pKa = 3.8AMRR260 pKa = 11.84RR261 pKa = 11.84RR262 pKa = 11.84FTVVEE267 pKa = 4.41KK268 pKa = 11.08VAGQDD273 pKa = 3.64IIMLL277 pKa = 4.4

Molecular weight: 32.15 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A346BPE4|A0A346BPE4_9VIRU Putative capsid protein OS=Woodlouse hunter spider associated circular virus 1 OX=2293310 PE=4 SV=1
MM1 pKa = 7.35PRR3 pKa = 11.84RR4 pKa = 11.84RR5 pKa = 11.84RR6 pKa = 11.84TAKK9 pKa = 8.67RR10 pKa = 11.84RR11 pKa = 11.84KK12 pKa = 8.64RR13 pKa = 11.84RR14 pKa = 11.84TVKK17 pKa = 10.11RR18 pKa = 11.84RR19 pKa = 11.84SKK21 pKa = 10.21KK22 pKa = 9.66GRR24 pKa = 11.84RR25 pKa = 11.84LGKK28 pKa = 9.57RR29 pKa = 11.84QMDD32 pKa = 4.31IYY34 pKa = 10.12PSTGDD39 pKa = 3.43YY40 pKa = 11.04VYY42 pKa = 11.68GDD44 pKa = 3.73MHH46 pKa = 8.46RR47 pKa = 11.84MAKK50 pKa = 9.98KK51 pKa = 10.06IKK53 pKa = 8.41TSLGGSSSYY62 pKa = 9.63TASRR66 pKa = 11.84KK67 pKa = 10.07DD68 pKa = 3.34DD69 pKa = 4.43DD70 pKa = 3.92QWSMTQEE77 pKa = 4.21DD78 pKa = 4.79GIKK81 pKa = 10.48YY82 pKa = 8.23KK83 pKa = 10.32TINITYY89 pKa = 8.94KK90 pKa = 9.72KK91 pKa = 10.35SKK93 pKa = 9.84IGRR96 pKa = 11.84LTQRR100 pKa = 11.84LTSPGNLYY108 pKa = 10.69DD109 pKa = 3.75YY110 pKa = 9.68ATGGGASTQGRR121 pKa = 11.84QAVTDD126 pKa = 4.21ASAFNGGDD134 pKa = 3.62FNTLFQGLNNGVAITAIKK152 pKa = 10.41ASNQLFVKK160 pKa = 9.47QVKK163 pKa = 10.29HH164 pKa = 5.73EE165 pKa = 4.18MEE167 pKa = 4.55FNNAGPTTLEE177 pKa = 3.57MDD179 pKa = 3.94VYY181 pKa = 11.16ILIDD185 pKa = 3.89KK186 pKa = 8.1NTGGAISNPLTIWDD200 pKa = 3.75AALNSEE206 pKa = 4.56TNLVDD211 pKa = 5.55AIVEE215 pKa = 4.28AKK217 pKa = 10.03NKK219 pKa = 9.32PWLKK223 pKa = 9.2PTTLKK228 pKa = 11.04LFWFYY233 pKa = 10.69PKK235 pKa = 10.33SIPKK239 pKa = 9.96SIQTSRR245 pKa = 11.84IRR247 pKa = 11.84DD248 pKa = 3.76SNSTSHH254 pKa = 7.33TIPPRR259 pKa = 3.89

Molecular weight: 29.13 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

2

0

2

536

259

277

268.0

30.64

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

6.343 ± 0.149

1.119 ± 0.758

6.157 ± 0.247

4.664 ± 1.59

3.358 ± 0.444

7.276 ± 0.302

1.679 ± 0.353

6.343 ± 0.149

7.276 ± 1.609

6.53 ± 0.239

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.425 ± 0.188

3.918 ± 1.269

4.851 ± 0.409

3.731 ± 0.088

7.836 ± 0.184

6.716 ± 0.942

7.649 ± 1.356

4.851 ± 0.932

2.425 ± 0.597

4.851 ± 0.67
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski