Suricata suricatta (Meerkat)

Taxonomy: cellular organisms; Eukaryota; Opisthokonta; Metazoa; Eumetazoa; Bilateria; Deuterostomia; Chordata; Craniata; Vertebrata; Gnathostomata; Teleostomi; Euteleostomi; Sarcopterygii; Dipnotetrapodomorpha; Tetrapoda; Amniota; Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Carnivora;

Average proteome isoelectric point is 6.77

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 37193 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A673TZ75|A0A673TZ75_SURSU Isoform of A0A673TLK2 Major facilitator superfamily domain containing 1 OS=Suricata suricatta OX=37032 GN=MFSD1 PE=4 SV=1
MM1 pKa = 7.55LLFVSLGLALGSALTAQSLEE21 pKa = 4.14PASDD25 pKa = 3.56SVSPSLSFPAQPEE38 pKa = 4.24TEE40 pKa = 3.89AVLNGRR46 pKa = 11.84GLGTGTVYY54 pKa = 10.36IAEE57 pKa = 4.62SRR59 pKa = 11.84LSWLDD64 pKa = 3.16GSGLGFSLKK73 pKa = 10.23YY74 pKa = 10.16ATISLHH80 pKa = 6.87AVSKK84 pKa = 10.71DD85 pKa = 3.04LNAYY89 pKa = 8.59PRR91 pKa = 11.84EE92 pKa = 4.02HH93 pKa = 7.32LYY95 pKa = 11.69VMVNAKK101 pKa = 10.2FGEE104 pKa = 4.16EE105 pKa = 4.11SKK107 pKa = 11.12EE108 pKa = 4.07SVAEE112 pKa = 4.03EE113 pKa = 4.24EE114 pKa = 4.43EE115 pKa = 4.74EE116 pKa = 4.12EE117 pKa = 5.49DD118 pKa = 4.47SDD120 pKa = 6.17DD121 pKa = 3.89DD122 pKa = 4.15VEE124 pKa = 5.15PIAEE128 pKa = 4.09FRR130 pKa = 11.84FVPSDD135 pKa = 3.36KK136 pKa = 10.88SALEE140 pKa = 3.9AMFTAMCEE148 pKa = 4.33CQALHH153 pKa = 7.39PDD155 pKa = 4.25PEE157 pKa = 6.21DD158 pKa = 4.16EE159 pKa = 6.53DD160 pKa = 5.1SDD162 pKa = 5.45DD163 pKa = 4.29YY164 pKa = 11.91DD165 pKa = 4.07GEE167 pKa = 4.35EE168 pKa = 4.51YY169 pKa = 10.58DD170 pKa = 5.25VEE172 pKa = 4.24AHH174 pKa = 5.97EE175 pKa = 4.84QGQGDD180 pKa = 3.58IATFYY185 pKa = 10.17TYY187 pKa = 11.02EE188 pKa = 4.29EE189 pKa = 4.64GLSHH193 pKa = 6.9LTAEE197 pKa = 4.79GQATLDD203 pKa = 3.62RR204 pKa = 11.84LEE206 pKa = 4.77GMLSQAVTNQYY217 pKa = 11.16NMAGVDD223 pKa = 3.62TTPTVAGQFEE233 pKa = 4.58DD234 pKa = 4.85ADD236 pKa = 3.71VDD238 pKa = 3.98HH239 pKa = 7.2

Molecular weight: 25.88 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A673URI0|A0A673URI0_SURSU A20-type domain-containing protein OS=Suricata suricatta OX=37032 PE=4 SV=1
MM1 pKa = 7.1RR2 pKa = 11.84AKK4 pKa = 9.12WRR6 pKa = 11.84KK7 pKa = 9.1KK8 pKa = 9.32RR9 pKa = 11.84MRR11 pKa = 11.84RR12 pKa = 11.84LKK14 pKa = 10.08RR15 pKa = 11.84KK16 pKa = 8.21RR17 pKa = 11.84RR18 pKa = 11.84KK19 pKa = 8.46MRR21 pKa = 11.84QRR23 pKa = 11.84SKK25 pKa = 11.41

Molecular weight: 3.46 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

19357

17836

37193

21738693

19

35119

584.5

64.93

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

7.042 ± 0.013

2.179 ± 0.009

4.825 ± 0.007

7.151 ± 0.017

3.572 ± 0.009

6.558 ± 0.016

2.553 ± 0.007

4.278 ± 0.013

5.734 ± 0.015

9.895 ± 0.02

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.114 ± 0.006

3.534 ± 0.009

6.366 ± 0.02

4.745 ± 0.014

5.768 ± 0.012

8.321 ± 0.016

5.263 ± 0.012

6.081 ± 0.013

1.2 ± 0.004

2.591 ± 0.007
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski