Yersinia phage fHe-Yen3-01

Taxonomy: Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Autographiviridae; Melnykvirinae; Pokrovskaiavirus; Yersinia virus fHeYen301

Average proteome isoelectric point is 6.43

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 56 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A1L7DQG9|A0A1L7DQG9_9CAUD Uncharacterized protein OS=Yersinia phage fHe-Yen3-01 OX=1932893 GN=fHeYen301_13 PE=4 SV=1
MM1 pKa = 7.79NIQQIIDD8 pKa = 3.43VVGAVTAGRR17 pKa = 11.84SFYY20 pKa = 10.45IAGGFARR27 pKa = 11.84DD28 pKa = 3.03LAYY31 pKa = 10.37CVKK34 pKa = 10.21PKK36 pKa = 11.13DD37 pKa = 3.47MDD39 pKa = 4.34LLFTADD45 pKa = 4.18ARR47 pKa = 11.84DD48 pKa = 3.63SNADD52 pKa = 3.39VFADD56 pKa = 3.32MCDD59 pKa = 3.56YY60 pKa = 11.6SDD62 pKa = 4.51ALSKK66 pKa = 10.83LGYY69 pKa = 9.84KK70 pKa = 9.09VAIYY74 pKa = 9.74QAYY77 pKa = 9.31DD78 pKa = 3.28QSDD81 pKa = 3.55KK82 pKa = 11.43PGDD85 pKa = 3.58FNDD88 pKa = 4.24RR89 pKa = 11.84LFGCMKK95 pKa = 10.48VEE97 pKa = 4.18GFDD100 pKa = 3.54VDD102 pKa = 3.71VDD104 pKa = 4.34LLFSKK109 pKa = 10.9YY110 pKa = 9.89EE111 pKa = 4.24SIGEE115 pKa = 4.04ILEE118 pKa = 4.67HH119 pKa = 7.0FDD121 pKa = 3.76FNINQFYY128 pKa = 10.16ILPYY132 pKa = 9.99SKK134 pKa = 10.11PIYY137 pKa = 10.31ARR139 pKa = 11.84GVKK142 pKa = 9.76PDD144 pKa = 3.71TLVQLKK150 pKa = 10.27DD151 pKa = 3.32VSEE154 pKa = 3.97QRR156 pKa = 11.84KK157 pKa = 9.42EE158 pKa = 3.68YY159 pKa = 8.01MTAKK163 pKa = 10.6FEE165 pKa = 4.31VLNNQPVPEE174 pKa = 4.83GCLVRR179 pKa = 11.84PAHH182 pKa = 5.76IPEE185 pKa = 4.07RR186 pKa = 11.84AEE188 pKa = 4.02PYY190 pKa = 10.37RR191 pKa = 11.84LIITDD196 pKa = 3.63WNQPYY201 pKa = 9.01VWCYY205 pKa = 7.17VTGEE209 pKa = 3.79QTYY212 pKa = 9.96EE213 pKa = 3.99VFGGLTWEE221 pKa = 4.25EE222 pKa = 3.35VDD224 pKa = 3.31IARR227 pKa = 11.84ACGQLKK233 pKa = 9.64VHH235 pKa = 6.88DD236 pKa = 4.75ARR238 pKa = 11.84PNINRR243 pKa = 11.84ALDD246 pKa = 3.67YY247 pKa = 11.42DD248 pKa = 3.89NGEE251 pKa = 3.95HH252 pKa = 6.95HH253 pKa = 7.22LL254 pKa = 4.13

Molecular weight: 29.0 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A1L7DQF2|A0A1L7DQF2_9CAUD Uncharacterized protein OS=Yersinia phage fHe-Yen3-01 OX=1932893 GN=fHeYen301_15 PE=4 SV=1
MM1 pKa = 7.26VNLHH5 pKa = 6.3IIFRR9 pKa = 11.84RR10 pKa = 11.84RR11 pKa = 11.84LTDD14 pKa = 3.59FLFNPKK20 pKa = 9.74RR21 pKa = 11.84PNVVTFKK28 pKa = 10.85NVYY31 pKa = 6.84ITHH34 pKa = 6.18RR35 pKa = 11.84TGGLEE40 pKa = 4.04VKK42 pKa = 10.67HH43 pKa = 6.62NDD45 pKa = 2.86GKK47 pKa = 10.85VYY49 pKa = 10.02IYY51 pKa = 10.65SWHH54 pKa = 5.55TLNRR58 pKa = 11.84VRR60 pKa = 11.84TEE62 pKa = 3.65HH63 pKa = 6.63CC64 pKa = 3.81

Molecular weight: 7.75 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

56

0

56

13312

42

1259

237.7

26.44

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

9.638 ± 0.593

1.157 ± 0.18

6.468 ± 0.181

6.227 ± 0.272

3.538 ± 0.194

7.459 ± 0.282

2.021 ± 0.216

4.995 ± 0.264

6.363 ± 0.256

8.075 ± 0.372

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

3.102 ± 0.21

4.319 ± 0.217

3.839 ± 0.227

4.132 ± 0.341

5.364 ± 0.215

5.95 ± 0.264

5.566 ± 0.249

6.753 ± 0.349

1.337 ± 0.127

3.696 ± 0.219
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski