Simian virus 41 (SV41)

Taxonomy: Viruses; Riboviria; Orthornavirae; Negarnaviricota; Haploviricotina; Monjiviricetes; Mononegavirales; Paramyxoviridae; Rubulavirinae; Orthorubulavirus

Average proteome isoelectric point is 6.62

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 7 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>sp|P35341|L_SV41 RNA-directed RNA polymerase L OS=Simian virus 41 OX=2560766 GN=L PE=3 SV=1
MM1 pKa = 7.45SSVLKK6 pKa = 9.72TFEE9 pKa = 4.27RR10 pKa = 11.84FTIQQEE16 pKa = 4.37LQDD19 pKa = 4.5HH20 pKa = 6.5EE21 pKa = 4.9EE22 pKa = 4.22DD23 pKa = 3.74TPVPLEE29 pKa = 4.08TIRR32 pKa = 11.84PLIRR36 pKa = 11.84VFVVNSNDD44 pKa = 3.43PALRR48 pKa = 11.84AQLLLFNLRR57 pKa = 11.84IIMSNTARR65 pKa = 11.84EE66 pKa = 4.12SHH68 pKa = 5.79KK69 pKa = 9.86TGALLSMFSLPAAAMGNHH87 pKa = 6.73LKK89 pKa = 10.63LATRR93 pKa = 11.84SPEE96 pKa = 3.63ASIDD100 pKa = 3.52RR101 pKa = 11.84VEE103 pKa = 3.87ITGFEE108 pKa = 3.96GRR110 pKa = 11.84SFRR113 pKa = 11.84VVPDD117 pKa = 3.33ARR119 pKa = 11.84STMSRR124 pKa = 11.84AEE126 pKa = 3.9VLAYY130 pKa = 9.62EE131 pKa = 5.47AIAEE135 pKa = 4.97DD136 pKa = 4.79IPDD139 pKa = 4.07TLNHH143 pKa = 5.98KK144 pKa = 9.06TPFVNADD151 pKa = 3.65VEE153 pKa = 4.24QGDD156 pKa = 3.79YY157 pKa = 11.56DD158 pKa = 3.76EE159 pKa = 5.32TEE161 pKa = 4.42GFLEE165 pKa = 4.19LCYY168 pKa = 10.61SVLMQAWIVTCKK180 pKa = 10.52CMTAPDD186 pKa = 3.9QPPISIEE193 pKa = 3.69KK194 pKa = 10.45RR195 pKa = 11.84MAKK198 pKa = 9.66YY199 pKa = 9.36QQQGRR204 pKa = 11.84INPRR208 pKa = 11.84FILQPEE214 pKa = 4.06ARR216 pKa = 11.84RR217 pKa = 11.84IIQNAIRR224 pKa = 11.84KK225 pKa = 9.23AMVVRR230 pKa = 11.84HH231 pKa = 5.62FLTYY235 pKa = 9.71EE236 pKa = 3.74LQMAQSKK243 pKa = 8.03TLLANRR249 pKa = 11.84YY250 pKa = 8.04YY251 pKa = 11.72AMVGDD256 pKa = 3.48VGKK259 pKa = 10.62YY260 pKa = 9.31IEE262 pKa = 4.36HH263 pKa = 6.76SGMGGFFCTLKK274 pKa = 10.9YY275 pKa = 10.94GLGTRR280 pKa = 11.84WPTLALAAFSGEE292 pKa = 4.06LQKK295 pKa = 11.25LKK297 pKa = 11.14ALMLHH302 pKa = 5.45YY303 pKa = 10.47QSLGPMAKK311 pKa = 10.14YY312 pKa = 8.52MALLEE317 pKa = 4.47SPKK320 pKa = 11.04LMDD323 pKa = 4.61FAPAEE328 pKa = 4.13YY329 pKa = 9.83PLMYY333 pKa = 9.81SYY335 pKa = 11.85AMGIGTVIDD344 pKa = 3.62TNMRR348 pKa = 11.84NYY350 pKa = 10.9AYY352 pKa = 10.14GRR354 pKa = 11.84SYY356 pKa = 11.49LNPQYY361 pKa = 10.46FQLGVEE367 pKa = 4.63TARR370 pKa = 11.84KK371 pKa = 7.58QQGAVDD377 pKa = 3.6HH378 pKa = 6.43RR379 pKa = 11.84TAEE382 pKa = 4.21DD383 pKa = 3.41LGMSQADD390 pKa = 3.88KK391 pKa = 11.56VEE393 pKa = 4.1LAATLAKK400 pKa = 9.61LTIGQGGRR408 pKa = 11.84GRR410 pKa = 11.84QPLDD414 pKa = 3.43DD415 pKa = 4.86PFAGAAGDD423 pKa = 4.0YY424 pKa = 10.36QGAAAGGAQGFDD436 pKa = 3.35YY437 pKa = 10.96ASRR440 pKa = 11.84RR441 pKa = 11.84VRR443 pKa = 11.84KK444 pKa = 9.91YY445 pKa = 10.58NDD447 pKa = 3.27YY448 pKa = 11.24EE449 pKa = 4.58SDD451 pKa = 3.62EE452 pKa = 4.29EE453 pKa = 5.52AGMDD457 pKa = 4.53DD458 pKa = 6.04DD459 pKa = 4.98YY460 pKa = 11.64EE461 pKa = 4.4QEE463 pKa = 3.87ARR465 pKa = 11.84EE466 pKa = 4.02GRR468 pKa = 11.84GYY470 pKa = 11.05DD471 pKa = 4.84DD472 pKa = 5.61DD473 pKa = 5.49DD474 pKa = 3.76ARR476 pKa = 11.84QGIGGQSGFDD486 pKa = 3.11FSVPQRR492 pKa = 11.84APGMSDD498 pKa = 3.57EE499 pKa = 4.47EE500 pKa = 4.53FQAQMTKK507 pKa = 10.57YY508 pKa = 8.28IQHH511 pKa = 5.49VQQHH515 pKa = 4.66YY516 pKa = 10.73QEE518 pKa = 4.48AQEE521 pKa = 4.12GAEE524 pKa = 3.97DD525 pKa = 3.41GGYY528 pKa = 9.7NQTTDD533 pKa = 3.47DD534 pKa = 3.85QGAGGDD540 pKa = 3.72FDD542 pKa = 4.03TT543 pKa = 5.6

Molecular weight: 60.58 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>sp|P27018|NCAP_SV41 Nucleoprotein OS=Simian virus 41 OX=2560766 GN=N PE=2 SV=1
MM1 pKa = 7.07PTISIPADD9 pKa = 3.43PASPDD14 pKa = 3.21QGLKK18 pKa = 10.31PFPIQLDD25 pKa = 3.84SKK27 pKa = 10.65DD28 pKa = 3.71GKK30 pKa = 10.47SGKK33 pKa = 9.17LVKK36 pKa = 10.24QIRR39 pKa = 11.84IKK41 pKa = 11.11YY42 pKa = 7.59LTEE45 pKa = 4.36PNSRR49 pKa = 11.84SPPLTFINTYY59 pKa = 9.66GFIYY63 pKa = 10.55ARR65 pKa = 11.84DD66 pKa = 3.54LSGGIMNEE74 pKa = 3.85QSSGIQSGSVTACMMTLGPGPDD96 pKa = 2.86IKK98 pKa = 10.98NANRR102 pKa = 11.84VLAALNGFYY111 pKa = 11.05VKK113 pKa = 10.14VRR115 pKa = 11.84KK116 pKa = 8.02TSSLKK121 pKa = 10.18EE122 pKa = 3.66EE123 pKa = 4.29AVFEE127 pKa = 4.21LVNVPKK133 pKa = 10.81LLANHH138 pKa = 7.28ALCKK142 pKa = 9.9QGRR145 pKa = 11.84LVCSAEE151 pKa = 4.14KK152 pKa = 10.19FVKK155 pKa = 10.57NPSKK159 pKa = 10.56MMAGQEE165 pKa = 3.98YY166 pKa = 9.89LYY168 pKa = 10.82FPTFVSLTYY177 pKa = 10.62CPSNLNYY184 pKa = 9.94QVAKK188 pKa = 9.72PILKK192 pKa = 9.1IRR194 pKa = 11.84SRR196 pKa = 11.84FVYY199 pKa = 9.6SIHH202 pKa = 6.04MEE204 pKa = 3.94IIFRR208 pKa = 11.84LLCKK212 pKa = 9.77PDD214 pKa = 3.57SPLLKK219 pKa = 9.82TYY221 pKa = 9.41ATDD224 pKa = 3.7PEE226 pKa = 4.57GRR228 pKa = 11.84GCLASVWIHH237 pKa = 5.23VCNILKK243 pKa = 10.14NKK245 pKa = 9.73KK246 pKa = 8.61IKK248 pKa = 9.95QRR250 pKa = 11.84GVDD253 pKa = 3.46SYY255 pKa = 11.19FSSKK259 pKa = 10.15AISMQLTVSIADD271 pKa = 3.27TWGPTVIIKK280 pKa = 10.84ANGHH284 pKa = 5.23IPKK287 pKa = 8.97TAAPFFSKK295 pKa = 10.67DD296 pKa = 2.96GVACHH301 pKa = 6.66PLQDD305 pKa = 3.76VSPALTKK312 pKa = 10.62SLWSVGCEE320 pKa = 3.39ITKK323 pKa = 10.51ARR325 pKa = 11.84LILQEE330 pKa = 4.47SNISDD335 pKa = 3.98LLKK338 pKa = 9.76TQDD341 pKa = 5.43LITDD345 pKa = 3.67QIKK348 pKa = 9.78IKK350 pKa = 10.25KK351 pKa = 8.01GHH353 pKa = 4.81SHH355 pKa = 7.66FGRR358 pKa = 11.84SSFNPFKK365 pKa = 10.81KK366 pKa = 10.49AISLPNLTQLGQDD379 pKa = 4.52DD380 pKa = 4.07EE381 pKa = 4.75DD382 pKa = 3.77

Molecular weight: 42.16 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

7

0

7

4943

225

2269

706.1

78.1

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

7.951 ± 1.123

1.78 ± 0.256

5.017 ± 0.448

4.673 ± 0.423

3.338 ± 0.41

5.887 ± 0.818

1.962 ± 0.324

7.04 ± 0.605

4.876 ± 0.79

10.803 ± 0.912

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.387 ± 0.303

4.876 ± 0.473

5.341 ± 0.457

4.329 ± 0.362

4.39 ± 0.351

8.133 ± 0.568

6.777 ± 0.464

5.665 ± 0.395

1.072 ± 0.279

3.702 ± 0.501
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski