Hubei noda-like virus 17

Taxonomy: Viruses; Riboviria; unclassified Riboviria; unclassified RNA viruses ShiM-2016

Average proteome isoelectric point is 6.59

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 1 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A1L3KFZ6|A0A1L3KFZ6_9VIRU RNA replicase OS=Hubei noda-like virus 17 OX=1922972 PE=3 SV=1
MM1 pKa = 7.21SRR3 pKa = 11.84IVVAAVSAAAITTLTFGCFTVLMRR27 pKa = 11.84RR28 pKa = 11.84KK29 pKa = 8.55RR30 pKa = 11.84TKK32 pKa = 10.73AFLASKK38 pKa = 10.11LQDD41 pKa = 3.66LFSVYY46 pKa = 9.9HH47 pKa = 6.68DD48 pKa = 3.66PVARR52 pKa = 11.84SAVIKK57 pKa = 10.81SFVKK61 pKa = 8.66QHH63 pKa = 5.09IGARR67 pKa = 11.84AGHH70 pKa = 5.54SHH72 pKa = 7.02AEE74 pKa = 3.9AATDD78 pKa = 3.89RR79 pKa = 11.84NSATQTMHH87 pKa = 5.81TAARR91 pKa = 11.84QLGMQPYY98 pKa = 9.37VISPSRR104 pKa = 11.84RR105 pKa = 11.84EE106 pKa = 3.57SDD108 pKa = 3.07AMGWRR113 pKa = 11.84CYY115 pKa = 9.62FQSNDD120 pKa = 2.92YY121 pKa = 11.21GMQTKK126 pKa = 10.34YY127 pKa = 11.08DD128 pKa = 5.22AIPEE132 pKa = 4.13DD133 pKa = 3.74ACFIMTDD140 pKa = 2.79VDD142 pKa = 4.47YY143 pKa = 11.3YY144 pKa = 11.81ADD146 pKa = 3.74MPDD149 pKa = 3.63WLSLARR155 pKa = 11.84PILMYY160 pKa = 10.72SFMPTRR166 pKa = 11.84VAGNVDD172 pKa = 3.42GSNFTIVNDD181 pKa = 3.46YY182 pKa = 10.3VRR184 pKa = 11.84YY185 pKa = 9.07RR186 pKa = 11.84VNGGGDD192 pKa = 3.63FKK194 pKa = 11.3HH195 pKa = 6.64QIWNWNYY202 pKa = 7.83DD203 pKa = 3.55TLYY206 pKa = 11.28VDD208 pKa = 4.13MPCNIMQQCIRR219 pKa = 11.84GLCNVFGWGYY229 pKa = 8.84RR230 pKa = 11.84RR231 pKa = 11.84HH232 pKa = 6.08YY233 pKa = 9.24FTIDD237 pKa = 3.32SIAFGTMHH245 pKa = 7.45NIYY248 pKa = 10.66VLLPLRR254 pKa = 11.84TLSIDD259 pKa = 3.84FLQLGNQLEE268 pKa = 4.27RR269 pKa = 11.84MQFSDD274 pKa = 3.87GAFNKK279 pKa = 10.56LLVNKK284 pKa = 10.38DD285 pKa = 2.92GEE287 pKa = 4.48LWVSIAKK294 pKa = 9.86QGEE297 pKa = 4.32YY298 pKa = 9.73TAVDD302 pKa = 3.26LTINEE307 pKa = 4.3FEE309 pKa = 4.3AVSATFSLASKK320 pKa = 10.29HH321 pKa = 5.35YY322 pKa = 10.67LADD325 pKa = 3.59TLRR328 pKa = 11.84WAPSIKK334 pKa = 10.7NNGTASILHH343 pKa = 6.8CYY345 pKa = 9.77LNQEE349 pKa = 3.68IHH351 pKa = 6.87RR352 pKa = 11.84PQDD355 pKa = 3.24NLVFQPGTMSPHH367 pKa = 6.47YY368 pKa = 10.39IVDD371 pKa = 4.02PKK373 pKa = 10.71PYY375 pKa = 10.22EE376 pKa = 4.05EE377 pKa = 4.11YY378 pKa = 10.67HH379 pKa = 6.33FYY381 pKa = 11.3ARR383 pKa = 11.84DD384 pKa = 3.55FAPCPLSSPALAPAVSQTNEE404 pKa = 3.62DD405 pKa = 3.26VTINEE410 pKa = 4.22RR411 pKa = 11.84VVKK414 pKa = 9.38PQLRR418 pKa = 11.84SGRR421 pKa = 11.84KK422 pKa = 6.15TPPRR426 pKa = 11.84RR427 pKa = 11.84FVEE430 pKa = 4.2YY431 pKa = 10.23ANEE434 pKa = 4.76FIAQLIEE441 pKa = 4.57GYY443 pKa = 9.02EE444 pKa = 4.2HH445 pKa = 7.7VGEE448 pKa = 4.15PWQWEE453 pKa = 4.26DD454 pKa = 3.52VAEE457 pKa = 4.28LQTRR461 pKa = 11.84KK462 pKa = 8.71HH463 pKa = 4.28QRR465 pKa = 11.84MRR467 pKa = 11.84NARR470 pKa = 11.84SILHH474 pKa = 5.18STCDD478 pKa = 3.46FVVRR482 pKa = 11.84AFQKK486 pKa = 10.04KK487 pKa = 6.64EE488 pKa = 3.8HH489 pKa = 6.45YY490 pKa = 10.28SGISAPRR497 pKa = 11.84NISTVPSEE505 pKa = 4.05HH506 pKa = 5.84TLEE509 pKa = 4.28YY510 pKa = 10.38STFTRR515 pKa = 11.84SFKK518 pKa = 11.04DD519 pKa = 3.29VILKK523 pKa = 9.09HH524 pKa = 5.3AHH526 pKa = 5.82WYY528 pKa = 9.8VPGSNPEE535 pKa = 3.86QIAQRR540 pKa = 11.84VADD543 pKa = 4.62LARR546 pKa = 11.84SGDD549 pKa = 3.99SVLEE553 pKa = 3.97TDD555 pKa = 4.66FSKK558 pKa = 11.04FDD560 pKa = 3.51GHH562 pKa = 5.75QSAWLHH568 pKa = 4.49YY569 pKa = 8.68HH570 pKa = 5.7VEE572 pKa = 4.94FPAHH576 pKa = 5.64YY577 pKa = 10.37LFFKK581 pKa = 10.36EE582 pKa = 3.96SYY584 pKa = 9.7RR585 pKa = 11.84YY586 pKa = 10.16KK587 pKa = 10.52LYY589 pKa = 10.41EE590 pKa = 3.56LHH592 pKa = 7.14ARR594 pKa = 11.84EE595 pKa = 4.75LSPKK599 pKa = 10.46AFTSTGKK606 pKa = 10.25QYY608 pKa = 9.63STEE611 pKa = 3.94FSRR614 pKa = 11.84LSGTPNTTDD623 pKa = 4.06GNTLLNAFFQYY634 pKa = 9.03ATARR638 pKa = 11.84EE639 pKa = 4.11MQLSPKK645 pKa = 9.8HH646 pKa = 6.06AYY648 pKa = 8.47QAIGLAYY655 pKa = 10.07GDD657 pKa = 4.94DD658 pKa = 3.85GLMSSVIKK666 pKa = 10.31PEE668 pKa = 3.8IAIKK672 pKa = 8.8TAEE675 pKa = 4.32TIGLPVKK682 pKa = 9.9TNIVRR687 pKa = 11.84YY688 pKa = 9.12GEE690 pKa = 4.17PVTFLSRR697 pKa = 11.84VFRR700 pKa = 11.84DD701 pKa = 3.13PWVCLSSIQEE711 pKa = 4.13PKK713 pKa = 10.26RR714 pKa = 11.84ALAKK718 pKa = 10.28INSTVHH724 pKa = 6.48PEE726 pKa = 3.54LDD728 pKa = 3.05IRR730 pKa = 11.84QAGLMKK736 pKa = 10.52VSGYY740 pKa = 10.81LVTDD744 pKa = 4.54AYY746 pKa = 10.17TPVISDD752 pKa = 3.09WCYY755 pKa = 9.53AYY757 pKa = 10.87LRR759 pKa = 11.84ITAQEE764 pKa = 4.06PTTEE768 pKa = 4.09LAEE771 pKa = 4.17SDD773 pKa = 3.52ANYY776 pKa = 9.43FAQEE780 pKa = 4.28YY781 pKa = 9.65PDD783 pKa = 4.2TPWPQDD789 pKa = 3.72SSIEE793 pKa = 3.97WLDD796 pKa = 3.2IVANLLGVQPVDD808 pKa = 2.87INNFIEE814 pKa = 4.15QCKK817 pKa = 9.97VATTLDD823 pKa = 3.72QLPVLTIDD831 pKa = 3.73NAEE834 pKa = 4.04HH835 pKa = 6.84KK836 pKa = 9.23MDD838 pKa = 3.44GVIYY842 pKa = 9.14TSTGSVEE849 pKa = 4.3ISTQTEE855 pKa = 4.02NEE857 pKa = 3.68AMADD861 pKa = 3.82TNSQPTTTEE870 pKa = 3.87GNRR873 pKa = 11.84DD874 pKa = 3.52EE875 pKa = 4.5ATADD879 pKa = 3.18AGSRR883 pKa = 11.84TLPAHH888 pKa = 6.1SGEE891 pKa = 4.56ANRR894 pKa = 11.84STRR897 pKa = 11.84QPRR900 pKa = 11.84RR901 pKa = 11.84NQGGDD906 pKa = 3.24QRR908 pKa = 11.84PTNTAQPKK916 pKa = 9.71NRR918 pKa = 11.84LPHH921 pKa = 5.27QRR923 pKa = 11.84NSRR926 pKa = 11.84GKK928 pKa = 7.91GQRR931 pKa = 11.84ISGLRR936 pKa = 11.84AEE938 pKa = 5.04TPNVMLDD945 pKa = 3.19SGQPRR950 pKa = 11.84HH951 pKa = 6.29ASGAAARR958 pKa = 11.84ARR960 pKa = 11.84NSAHH964 pKa = 6.47RR965 pKa = 11.84RR966 pKa = 11.84TVTKK970 pKa = 9.35TQGNQPATNKK980 pKa = 9.06STT982 pKa = 3.33

Molecular weight: 110.78 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A1L3KFZ6|A0A1L3KFZ6_9VIRU RNA replicase OS=Hubei noda-like virus 17 OX=1922972 PE=3 SV=1
MM1 pKa = 7.21SRR3 pKa = 11.84IVVAAVSAAAITTLTFGCFTVLMRR27 pKa = 11.84RR28 pKa = 11.84KK29 pKa = 8.55RR30 pKa = 11.84TKK32 pKa = 10.73AFLASKK38 pKa = 10.11LQDD41 pKa = 3.66LFSVYY46 pKa = 9.9HH47 pKa = 6.68DD48 pKa = 3.66PVARR52 pKa = 11.84SAVIKK57 pKa = 10.81SFVKK61 pKa = 8.66QHH63 pKa = 5.09IGARR67 pKa = 11.84AGHH70 pKa = 5.54SHH72 pKa = 7.02AEE74 pKa = 3.9AATDD78 pKa = 3.89RR79 pKa = 11.84NSATQTMHH87 pKa = 5.81TAARR91 pKa = 11.84QLGMQPYY98 pKa = 9.37VISPSRR104 pKa = 11.84RR105 pKa = 11.84EE106 pKa = 3.57SDD108 pKa = 3.07AMGWRR113 pKa = 11.84CYY115 pKa = 9.62FQSNDD120 pKa = 2.92YY121 pKa = 11.21GMQTKK126 pKa = 10.34YY127 pKa = 11.08DD128 pKa = 5.22AIPEE132 pKa = 4.13DD133 pKa = 3.74ACFIMTDD140 pKa = 2.79VDD142 pKa = 4.47YY143 pKa = 11.3YY144 pKa = 11.81ADD146 pKa = 3.74MPDD149 pKa = 3.63WLSLARR155 pKa = 11.84PILMYY160 pKa = 10.72SFMPTRR166 pKa = 11.84VAGNVDD172 pKa = 3.42GSNFTIVNDD181 pKa = 3.46YY182 pKa = 10.3VRR184 pKa = 11.84YY185 pKa = 9.07RR186 pKa = 11.84VNGGGDD192 pKa = 3.63FKK194 pKa = 11.3HH195 pKa = 6.64QIWNWNYY202 pKa = 7.83DD203 pKa = 3.55TLYY206 pKa = 11.28VDD208 pKa = 4.13MPCNIMQQCIRR219 pKa = 11.84GLCNVFGWGYY229 pKa = 8.84RR230 pKa = 11.84RR231 pKa = 11.84HH232 pKa = 6.08YY233 pKa = 9.24FTIDD237 pKa = 3.32SIAFGTMHH245 pKa = 7.45NIYY248 pKa = 10.66VLLPLRR254 pKa = 11.84TLSIDD259 pKa = 3.84FLQLGNQLEE268 pKa = 4.27RR269 pKa = 11.84MQFSDD274 pKa = 3.87GAFNKK279 pKa = 10.56LLVNKK284 pKa = 10.38DD285 pKa = 2.92GEE287 pKa = 4.48LWVSIAKK294 pKa = 9.86QGEE297 pKa = 4.32YY298 pKa = 9.73TAVDD302 pKa = 3.26LTINEE307 pKa = 4.3FEE309 pKa = 4.3AVSATFSLASKK320 pKa = 10.29HH321 pKa = 5.35YY322 pKa = 10.67LADD325 pKa = 3.59TLRR328 pKa = 11.84WAPSIKK334 pKa = 10.7NNGTASILHH343 pKa = 6.8CYY345 pKa = 9.77LNQEE349 pKa = 3.68IHH351 pKa = 6.87RR352 pKa = 11.84PQDD355 pKa = 3.24NLVFQPGTMSPHH367 pKa = 6.47YY368 pKa = 10.39IVDD371 pKa = 4.02PKK373 pKa = 10.71PYY375 pKa = 10.22EE376 pKa = 4.05EE377 pKa = 4.11YY378 pKa = 10.67HH379 pKa = 6.33FYY381 pKa = 11.3ARR383 pKa = 11.84DD384 pKa = 3.55FAPCPLSSPALAPAVSQTNEE404 pKa = 3.62DD405 pKa = 3.26VTINEE410 pKa = 4.22RR411 pKa = 11.84VVKK414 pKa = 9.38PQLRR418 pKa = 11.84SGRR421 pKa = 11.84KK422 pKa = 6.15TPPRR426 pKa = 11.84RR427 pKa = 11.84FVEE430 pKa = 4.2YY431 pKa = 10.23ANEE434 pKa = 4.76FIAQLIEE441 pKa = 4.57GYY443 pKa = 9.02EE444 pKa = 4.2HH445 pKa = 7.7VGEE448 pKa = 4.15PWQWEE453 pKa = 4.26DD454 pKa = 3.52VAEE457 pKa = 4.28LQTRR461 pKa = 11.84KK462 pKa = 8.71HH463 pKa = 4.28QRR465 pKa = 11.84MRR467 pKa = 11.84NARR470 pKa = 11.84SILHH474 pKa = 5.18STCDD478 pKa = 3.46FVVRR482 pKa = 11.84AFQKK486 pKa = 10.04KK487 pKa = 6.64EE488 pKa = 3.8HH489 pKa = 6.45YY490 pKa = 10.28SGISAPRR497 pKa = 11.84NISTVPSEE505 pKa = 4.05HH506 pKa = 5.84TLEE509 pKa = 4.28YY510 pKa = 10.38STFTRR515 pKa = 11.84SFKK518 pKa = 11.04DD519 pKa = 3.29VILKK523 pKa = 9.09HH524 pKa = 5.3AHH526 pKa = 5.82WYY528 pKa = 9.8VPGSNPEE535 pKa = 3.86QIAQRR540 pKa = 11.84VADD543 pKa = 4.62LARR546 pKa = 11.84SGDD549 pKa = 3.99SVLEE553 pKa = 3.97TDD555 pKa = 4.66FSKK558 pKa = 11.04FDD560 pKa = 3.51GHH562 pKa = 5.75QSAWLHH568 pKa = 4.49YY569 pKa = 8.68HH570 pKa = 5.7VEE572 pKa = 4.94FPAHH576 pKa = 5.64YY577 pKa = 10.37LFFKK581 pKa = 10.36EE582 pKa = 3.96SYY584 pKa = 9.7RR585 pKa = 11.84YY586 pKa = 10.16KK587 pKa = 10.52LYY589 pKa = 10.41EE590 pKa = 3.56LHH592 pKa = 7.14ARR594 pKa = 11.84EE595 pKa = 4.75LSPKK599 pKa = 10.46AFTSTGKK606 pKa = 10.25QYY608 pKa = 9.63STEE611 pKa = 3.94FSRR614 pKa = 11.84LSGTPNTTDD623 pKa = 4.06GNTLLNAFFQYY634 pKa = 9.03ATARR638 pKa = 11.84EE639 pKa = 4.11MQLSPKK645 pKa = 9.8HH646 pKa = 6.06AYY648 pKa = 8.47QAIGLAYY655 pKa = 10.07GDD657 pKa = 4.94DD658 pKa = 3.85GLMSSVIKK666 pKa = 10.31PEE668 pKa = 3.8IAIKK672 pKa = 8.8TAEE675 pKa = 4.32TIGLPVKK682 pKa = 9.9TNIVRR687 pKa = 11.84YY688 pKa = 9.12GEE690 pKa = 4.17PVTFLSRR697 pKa = 11.84VFRR700 pKa = 11.84DD701 pKa = 3.13PWVCLSSIQEE711 pKa = 4.13PKK713 pKa = 10.26RR714 pKa = 11.84ALAKK718 pKa = 10.28INSTVHH724 pKa = 6.48PEE726 pKa = 3.54LDD728 pKa = 3.05IRR730 pKa = 11.84QAGLMKK736 pKa = 10.52VSGYY740 pKa = 10.81LVTDD744 pKa = 4.54AYY746 pKa = 10.17TPVISDD752 pKa = 3.09WCYY755 pKa = 9.53AYY757 pKa = 10.87LRR759 pKa = 11.84ITAQEE764 pKa = 4.06PTTEE768 pKa = 4.09LAEE771 pKa = 4.17SDD773 pKa = 3.52ANYY776 pKa = 9.43FAQEE780 pKa = 4.28YY781 pKa = 9.65PDD783 pKa = 4.2TPWPQDD789 pKa = 3.72SSIEE793 pKa = 3.97WLDD796 pKa = 3.2IVANLLGVQPVDD808 pKa = 2.87INNFIEE814 pKa = 4.15QCKK817 pKa = 9.97VATTLDD823 pKa = 3.72QLPVLTIDD831 pKa = 3.73NAEE834 pKa = 4.04HH835 pKa = 6.84KK836 pKa = 9.23MDD838 pKa = 3.44GVIYY842 pKa = 9.14TSTGSVEE849 pKa = 4.3ISTQTEE855 pKa = 4.02NEE857 pKa = 3.68AMADD861 pKa = 3.82TNSQPTTTEE870 pKa = 3.87GNRR873 pKa = 11.84DD874 pKa = 3.52EE875 pKa = 4.5ATADD879 pKa = 3.18AGSRR883 pKa = 11.84TLPAHH888 pKa = 6.1SGEE891 pKa = 4.56ANRR894 pKa = 11.84STRR897 pKa = 11.84QPRR900 pKa = 11.84RR901 pKa = 11.84NQGGDD906 pKa = 3.24QRR908 pKa = 11.84PTNTAQPKK916 pKa = 9.71NRR918 pKa = 11.84LPHH921 pKa = 5.27QRR923 pKa = 11.84NSRR926 pKa = 11.84GKK928 pKa = 7.91GQRR931 pKa = 11.84ISGLRR936 pKa = 11.84AEE938 pKa = 5.04TPNVMLDD945 pKa = 3.19SGQPRR950 pKa = 11.84HH951 pKa = 6.29ASGAAARR958 pKa = 11.84ARR960 pKa = 11.84NSAHH964 pKa = 6.47RR965 pKa = 11.84RR966 pKa = 11.84TVTKK970 pKa = 9.35TQGNQPATNKK980 pKa = 9.06STT982 pKa = 3.33

Molecular weight: 110.78 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

1

0

1

982

982

982

982.0

110.78

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

8.961 ± 0.0

1.222 ± 0.0

5.397 ± 0.0

5.092 ± 0.0

4.073 ± 0.0

5.295 ± 0.0

3.259 ± 0.0

4.99 ± 0.0

3.87 ± 0.0

6.925 ± 0.0

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.24 ± 0.0

4.786 ± 0.0

5.397 ± 0.0

5.092 ± 0.0

6.517 ± 0.0

7.434 ± 0.0

7.536 ± 0.0

5.906 ± 0.0

1.527 ± 0.0

4.481 ± 0.0
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski