Chlorogloea sp. CCALA 695

Taxonomy: cellular organisms; Bacteria; Terrabacteria group; Cyanobacteria/Melainabacteria group; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Entophysalidaceae; Chlorogloea; unclassified Chlorogloea

Average proteome isoelectric point is 6.49

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 4747 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A2T1E8H0|A0A2T1E8H0_9CHRO Phosphate starvation-inducible protein PhoH OS=Chlorogloea sp. CCALA 695 OX=2107693 GN=C7B70_19500 PE=4 SV=1
MM1 pKa = 7.71DD2 pKa = 3.75TPFTFEE8 pKa = 5.23QEE10 pKa = 3.67TDD12 pKa = 3.1LNAWYY17 pKa = 9.27DD18 pKa = 3.78QLNSAWQAKK27 pKa = 9.17IADD30 pKa = 4.2PNSPEE35 pKa = 4.15SLSLAEE41 pKa = 5.51AEE43 pKa = 4.85AYY45 pKa = 9.07WEE47 pKa = 4.11AEE49 pKa = 3.42RR50 pKa = 11.84EE51 pKa = 4.24YY52 pKa = 10.82YY53 pKa = 10.03HH54 pKa = 7.72DD55 pKa = 3.93RR56 pKa = 11.84FLYY59 pKa = 10.79ADD61 pKa = 3.85IFF63 pKa = 4.01

Molecular weight: 7.52 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A2T1ENE8|A0A2T1ENE8_9CHRO DUF3893 domain-containing protein OS=Chlorogloea sp. CCALA 695 OX=2107693 GN=C7B70_04265 PE=4 SV=1
MM1 pKa = 7.58TEE3 pKa = 4.59FIVPQTSAKK12 pKa = 8.91AQKK15 pKa = 10.26HH16 pKa = 5.34SAPQDD21 pKa = 3.51RR22 pKa = 11.84IRR24 pKa = 11.84RR25 pKa = 11.84WVWKK29 pKa = 10.12LCIATLILMAIGSTTRR45 pKa = 11.84VMNAGLACPDD55 pKa = 3.16WPLCYY60 pKa = 9.36GTLVPRR66 pKa = 11.84AQMNLQVFLEE76 pKa = 4.36WFHH79 pKa = 7.71RR80 pKa = 11.84LDD82 pKa = 3.41AALIGVGALSLSVICWWNRR101 pKa = 11.84RR102 pKa = 11.84QLPGWLPWAATFALGLIMFQGVLGGLTVTQLLRR135 pKa = 11.84FDD137 pKa = 4.01IVTAHH142 pKa = 7.45LGTALLFFSTLLVMGTALTPYY163 pKa = 9.89QGTGTAGKK171 pKa = 10.06LPWLGLTAAILVYY184 pKa = 10.38LQSLLGALVASRR196 pKa = 11.84WALHH200 pKa = 5.34QCLTVKK206 pKa = 10.46ALCSVMYY213 pKa = 9.19SHH215 pKa = 7.43IGFVVLPSLAIIAVVWMSWRR235 pKa = 11.84TPALHH240 pKa = 5.92PTLRR244 pKa = 11.84LLANMTGGLLLLQILLGIATLRR266 pKa = 11.84LHH268 pKa = 6.52LQIEE272 pKa = 4.74PLTVAHH278 pKa = 5.76QAVGAALLGSLVIFTVLGWRR298 pKa = 11.84DD299 pKa = 3.41SASAPITGLRR309 pKa = 11.84AFLAARR315 pKa = 4.08

Molecular weight: 34.27 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

4747

0

4747

1414214

22

2885

297.9

33.13

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

8.447 ± 0.038

1.028 ± 0.012

4.8 ± 0.025

6.083 ± 0.033

3.81 ± 0.019

6.504 ± 0.037

1.723 ± 0.017

6.735 ± 0.025

5.079 ± 0.031

11.06 ± 0.04

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

1.806 ± 0.016

4.341 ± 0.027

4.62 ± 0.027

5.376 ± 0.035

5.07 ± 0.025

6.596 ± 0.027

5.76 ± 0.028

6.761 ± 0.032

1.395 ± 0.016

3.007 ± 0.021
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski