Ustilaginoidea virens RNA virus 3

Taxonomy: Viruses; Riboviria; Orthornavirae; Duplornaviricota; Chrymotiviricetes; Ghabrivirales; Totiviridae; Victorivirus; unclassified Victorivirus

Average proteome isoelectric point is 7.21

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 2 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|W5TYK1|W5TYK1_9VIRU Coat protein OS=Ustilaginoidea virens RNA virus 3 OX=1460374 PE=4 SV=1
MM1 pKa = 7.32ATTSRR6 pKa = 11.84FQEE9 pKa = 3.99NNFSYY14 pKa = 10.95LSGGVAGYY22 pKa = 10.47SSSTLVDD29 pKa = 3.44DD30 pKa = 3.75ATYY33 pKa = 10.36RR34 pKa = 11.84RR35 pKa = 11.84YY36 pKa = 9.99RR37 pKa = 11.84AGLTIGTYY45 pKa = 7.53EE46 pKa = 4.26HH47 pKa = 7.1GSYY50 pKa = 9.74TYY52 pKa = 10.18SRR54 pKa = 11.84RR55 pKa = 11.84SIFYY59 pKa = 8.72EE60 pKa = 3.92VGRR63 pKa = 11.84HH64 pKa = 4.73FSGVTKK70 pKa = 10.73ALAYY74 pKa = 10.58NHH76 pKa = 7.22ADD78 pKa = 3.72DD79 pKa = 5.96DD80 pKa = 4.28ALEE83 pKa = 4.64IDD85 pKa = 4.09ASIPINSVEE94 pKa = 3.92AANFEE99 pKa = 3.95GWARR103 pKa = 11.84KK104 pKa = 9.44YY105 pKa = 11.34SNFSPQWHH113 pKa = 6.27MMDD116 pKa = 3.31LCAVVEE122 pKa = 4.21RR123 pKa = 11.84LGKK126 pKa = 10.12AVAAQSVFGGVTTAHH141 pKa = 6.35LRR143 pKa = 11.84GGQPIRR149 pKa = 11.84AVALGTLDD157 pKa = 3.78SPQTASTNSVFIPRR171 pKa = 11.84TVDD174 pKa = 3.12SVGNDD179 pKa = 2.8KK180 pKa = 10.96VFSVLAAAVNGEE192 pKa = 4.09GSTVTTDD199 pKa = 3.68VLRR202 pKa = 11.84LDD204 pKa = 4.07AATNSPIMPEE214 pKa = 4.11CSGHH218 pKa = 6.3GLAKK222 pKa = 10.49ACVEE226 pKa = 4.02ALRR229 pKa = 11.84VLGANFEE236 pKa = 4.22ASGAGDD242 pKa = 4.13LFAYY246 pKa = 10.43ALTRR250 pKa = 11.84GIHH253 pKa = 5.75SGVSVVAHH261 pKa = 6.03TDD263 pKa = 2.89EE264 pKa = 5.22GGWFRR269 pKa = 11.84NVLRR273 pKa = 11.84ACHH276 pKa = 6.02FRR278 pKa = 11.84PPYY281 pKa = 10.61GGINLANRR289 pKa = 11.84DD290 pKa = 4.03YY291 pKa = 11.44PFLPPLAAEE300 pKa = 4.86DD301 pKa = 4.2GGATSAWVDD310 pKa = 4.04SIALKK315 pKa = 9.23TAALVAHH322 pKa = 7.21CDD324 pKa = 3.59PCTHH328 pKa = 6.5ATGGAYY334 pKa = 7.43PTIFVANDD342 pKa = 3.55GAVQPVGTHH351 pKa = 5.81EE352 pKa = 4.14PAGTEE357 pKa = 3.46RR358 pKa = 11.84DD359 pKa = 3.58AASLGGQIAADD370 pKa = 3.58VSRR373 pKa = 11.84FAPLYY378 pKa = 9.33MRR380 pKa = 11.84GLVKK384 pKa = 10.81LFGLRR389 pKa = 11.84ANSGVAEE396 pKa = 4.27SHH398 pKa = 6.65FSTVANVTLSGTKK411 pKa = 9.74DD412 pKa = 2.4RR413 pKa = 11.84HH414 pKa = 5.65LRR416 pKa = 11.84HH417 pKa = 5.83KK418 pKa = 9.21TVAPYY423 pKa = 9.74FFIEE427 pKa = 4.14PTSLIEE433 pKa = 4.18HH434 pKa = 7.1RR435 pKa = 11.84FLGSPAEE442 pKa = 4.06EE443 pKa = 4.25AGFGALTSPGAEE455 pKa = 3.8TEE457 pKa = 4.02LATFEE462 pKa = 4.39RR463 pKa = 11.84VRR465 pKa = 11.84EE466 pKa = 4.01LDD468 pKa = 3.24RR469 pKa = 11.84GKK471 pKa = 9.89HH472 pKa = 6.04ANFCTIAFKK481 pKa = 10.48MRR483 pKa = 11.84TARR486 pKa = 11.84TSGLVAAYY494 pKa = 9.93AGTPAEE500 pKa = 4.03LAGLRR505 pKa = 11.84LYY507 pKa = 10.78QFDD510 pKa = 3.92EE511 pKa = 4.83ASVVLPGDD519 pKa = 4.38LGPTAGTVSAKK530 pKa = 10.03HH531 pKa = 6.07ANADD535 pKa = 3.87PLSSYY540 pKa = 9.4LWKK543 pKa = 10.42RR544 pKa = 11.84GQSPIPAPAEE554 pKa = 3.71FVNIQGSYY562 pKa = 7.49AAKK565 pKa = 8.91YY566 pKa = 9.95HH567 pKa = 5.33VVTWDD572 pKa = 3.55DD573 pKa = 4.54DD574 pKa = 3.99FDD576 pKa = 4.09ATVSDD581 pKa = 5.47LPEE584 pKa = 4.07AWEE587 pKa = 4.52LEE589 pKa = 4.18SHH591 pKa = 5.03PTKK594 pKa = 10.23WRR596 pKa = 11.84VSVPTAIRR604 pKa = 11.84PGATNASDD612 pKa = 3.11NGARR616 pKa = 11.84RR617 pKa = 11.84ARR619 pKa = 11.84CRR621 pKa = 11.84AAIALAQTVIRR632 pKa = 11.84SRR634 pKa = 11.84GLGDD638 pKa = 4.13ANSPCITVSNTPPSWDD654 pKa = 4.37DD655 pKa = 3.16PVQPMARR662 pKa = 11.84KK663 pKa = 9.52EE664 pKa = 4.09DD665 pKa = 4.06TLHH668 pKa = 6.41HH669 pKa = 6.77PGVGTVSSFAEE680 pKa = 4.72GNPPPAVPAALGPPLAPTLTHH701 pKa = 5.89QPLRR705 pKa = 11.84GAPLPRR711 pKa = 11.84HH712 pKa = 5.83GGGVVTGPPPTAAVDD727 pKa = 4.03TPVVAPSAPPSVDD740 pKa = 3.47PRR742 pKa = 11.84PDD744 pKa = 3.72DD745 pKa = 5.03ADD747 pKa = 3.66TATAGPAPRR756 pKa = 11.84II757 pKa = 3.93

Molecular weight: 79.71 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|W5TYK1|W5TYK1_9VIRU Coat protein OS=Ustilaginoidea virens RNA virus 3 OX=1460374 PE=4 SV=1
MM1 pKa = 7.73GDD3 pKa = 4.07DD4 pKa = 4.75VITDD8 pKa = 3.88RR9 pKa = 11.84ANKK12 pKa = 9.88HH13 pKa = 5.53GLLGQYY19 pKa = 9.42LVRR22 pKa = 11.84WLRR25 pKa = 11.84PYY27 pKa = 9.09EE28 pKa = 4.33TGTFTALPLDD38 pKa = 3.78EE39 pKa = 4.26QMSYY43 pKa = 10.06IYY45 pKa = 10.5RR46 pKa = 11.84PFWGSTRR53 pKa = 11.84PPALARR59 pKa = 11.84AALSYY64 pKa = 10.73LGADD68 pKa = 3.37MPIQVVLSDD77 pKa = 4.16SDD79 pKa = 3.73FKK81 pKa = 11.39HH82 pKa = 6.19ILTYY86 pKa = 10.95LPTSPDD92 pKa = 2.98LPATVDD98 pKa = 3.35VPAWVFTKK106 pKa = 10.57AGTMQHH112 pKa = 6.02FRR114 pKa = 11.84PKK116 pKa = 10.06AHH118 pKa = 6.82AKK120 pKa = 10.21AVTKK124 pKa = 10.91ANIFLDD130 pKa = 3.71EE131 pKa = 4.15VLRR134 pKa = 11.84DD135 pKa = 3.89ARR137 pKa = 11.84RR138 pKa = 11.84LDD140 pKa = 3.57ANFVMAAWPYY150 pKa = 11.22LDD152 pKa = 5.15DD153 pKa = 4.65LRR155 pKa = 11.84SNGITHH161 pKa = 6.98DD162 pKa = 3.52QAVAFVLYY170 pKa = 10.41AWALKK175 pKa = 10.4GKK177 pKa = 7.9TVDD180 pKa = 3.37NLRR183 pKa = 11.84WAHH186 pKa = 5.99FCCSQRR192 pKa = 11.84KK193 pKa = 6.41EE194 pKa = 4.08AKK196 pKa = 9.53EE197 pKa = 3.65VSNFLKK203 pKa = 10.78AVGGNAHH210 pKa = 7.29PLGAMMVEE218 pKa = 4.34TDD220 pKa = 3.41TLAGRR225 pKa = 11.84GTGEE229 pKa = 3.98STLLEE234 pKa = 4.38GAIEE238 pKa = 4.33RR239 pKa = 11.84CDD241 pKa = 3.61LAALRR246 pKa = 11.84ASKK249 pKa = 10.37LAEE252 pKa = 3.92FDD254 pKa = 3.87EE255 pKa = 4.77NSLRR259 pKa = 11.84RR260 pKa = 11.84AIRR263 pKa = 11.84RR264 pKa = 11.84ILVSEE269 pKa = 4.46ISRR272 pKa = 11.84NDD274 pKa = 3.09TGGYY278 pKa = 9.78HH279 pKa = 7.04LAFPALSDD287 pKa = 3.13HH288 pKa = 6.48WASRR292 pKa = 11.84WRR294 pKa = 11.84WAVNGSHH301 pKa = 6.02SAEE304 pKa = 4.08VDD306 pKa = 3.67RR307 pKa = 11.84QCGFTPPPLPGGRR320 pKa = 11.84KK321 pKa = 5.08YY322 pKa = 10.38HH323 pKa = 5.71RR324 pKa = 11.84RR325 pKa = 11.84AWLEE329 pKa = 3.62TRR331 pKa = 11.84ADD333 pKa = 3.8DD334 pKa = 5.68PRR336 pKa = 11.84PGWDD340 pKa = 2.71GTTYY344 pKa = 10.87VSASDD349 pKa = 3.53KK350 pKa = 11.12LEE352 pKa = 4.23HH353 pKa = 6.47GKK355 pKa = 8.01TRR357 pKa = 11.84TILACDD363 pKa = 3.42TRR365 pKa = 11.84SYY367 pKa = 11.33LAFEE371 pKa = 4.57HH372 pKa = 7.05LMGTVEE378 pKa = 4.2KK379 pKa = 9.57AWRR382 pKa = 11.84GTRR385 pKa = 11.84VILNPGKK392 pKa = 10.44GGHH395 pKa = 6.45IGMANRR401 pKa = 11.84VEE403 pKa = 4.29RR404 pKa = 11.84NRR406 pKa = 11.84NRR408 pKa = 11.84SGVSMMLDD416 pKa = 3.08YY417 pKa = 11.58DD418 pKa = 4.48DD419 pKa = 5.94FNSHH423 pKa = 6.72HH424 pKa = 7.15SNEE427 pKa = 3.88AMKK430 pKa = 10.54ILVEE434 pKa = 4.36EE435 pKa = 4.69TCQLTGYY442 pKa = 8.8PAEE445 pKa = 4.32LAAPLIASFDD455 pKa = 3.46KK456 pKa = 10.82QRR458 pKa = 11.84IYY460 pKa = 11.2VAGKK464 pKa = 8.55YY465 pKa = 10.07VGVSRR470 pKa = 11.84GTLMSGHH477 pKa = 6.99RR478 pKa = 11.84CTTYY482 pKa = 10.57INSVLNMAYY491 pKa = 10.86LMVVLGDD498 pKa = 3.92DD499 pKa = 4.11FVMEE503 pKa = 4.64RR504 pKa = 11.84PTLHH508 pKa = 6.81VGDD511 pKa = 4.79DD512 pKa = 3.53VFFGVRR518 pKa = 11.84SYY520 pKa = 11.8SEE522 pKa = 3.71ACYY525 pKa = 10.04VARR528 pKa = 11.84SVLASRR534 pKa = 11.84LRR536 pKa = 11.84MNRR539 pKa = 11.84SKK541 pKa = 11.04QSVGHH546 pKa = 5.87VATEE550 pKa = 3.89FLRR553 pKa = 11.84VSSRR557 pKa = 11.84ARR559 pKa = 11.84DD560 pKa = 3.38SYY562 pKa = 11.81GYY564 pKa = 9.97LCRR567 pKa = 11.84AISSCVSGNWVSDD580 pKa = 3.52KK581 pKa = 11.31LLDD584 pKa = 4.33PYY586 pKa = 10.9EE587 pKa = 4.73ALNTMLGSARR597 pKa = 11.84TLMNRR602 pKa = 11.84AISHH606 pKa = 6.85DD607 pKa = 4.48LPLLLASAIKK617 pKa = 9.49RR618 pKa = 11.84TVRR621 pKa = 11.84ADD623 pKa = 3.43GLNDD627 pKa = 3.75RR628 pKa = 11.84LLTEE632 pKa = 4.7LLLGSVAVNNGPQFSSSGTHH652 pKa = 6.08RR653 pKa = 11.84IVWVQPQSRR662 pKa = 11.84LLDD665 pKa = 4.18PLDD668 pKa = 3.7VSLLPRR674 pKa = 11.84EE675 pKa = 4.35STASYY680 pKa = 10.56LVNCAQPIEE689 pKa = 4.42TQTLARR695 pKa = 11.84VGISPVGTMLASSYY709 pKa = 11.29AKK711 pKa = 10.38SLDD714 pKa = 3.51YY715 pKa = 11.31ARR717 pKa = 11.84TQTFRR722 pKa = 11.84LSFSAVHH729 pKa = 6.64TYY731 pKa = 10.41RR732 pKa = 11.84AVGSTTAEE740 pKa = 4.02LALASPKK747 pKa = 10.01PRR749 pKa = 11.84GILNQYY755 pKa = 9.19PLLVLVKK762 pKa = 10.3HH763 pKa = 6.36RR764 pKa = 11.84LPEE767 pKa = 3.99NVLRR771 pKa = 11.84EE772 pKa = 4.12VVATVGGNGHH782 pKa = 6.61AEE784 pKa = 4.14RR785 pKa = 11.84IVVEE789 pKa = 3.62AWGEE793 pKa = 3.92YY794 pKa = 9.04RR795 pKa = 11.84HH796 pKa = 6.08GCIINSVLSFSDD808 pKa = 3.88ASALGKK814 pKa = 9.85RR815 pKa = 11.84VKK817 pKa = 10.83ASVLTSGRR825 pKa = 11.84HH826 pKa = 5.33CYY828 pKa = 8.68VV829 pKa = 2.93

Molecular weight: 91.77 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

2

0

2

1586

757

829

793.0

85.74

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

11.98 ± 1.26

1.387 ± 0.116

5.422 ± 0.004

4.224 ± 0.002

3.342 ± 0.286

8.071 ± 0.611

3.153 ± 0.01

3.153 ± 0.067

2.774 ± 0.386

9.079 ± 1.138

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

1.702 ± 0.455

3.468 ± 0.097

5.99 ± 1.055

1.892 ± 0.102

7.251 ± 0.687

7.755 ± 0.209

6.81 ± 0.498

7.818 ± 0.014

1.513 ± 0.19

3.216 ± 0.258
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski