Beihai barnacle virus 13

Taxonomy: Viruses; Riboviria; unclassified Riboviria; unclassified RNA viruses ShiM-2016

Average proteome isoelectric point is 7.87

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 2 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A1L3KLI1|A0A1L3KLI1_9VIRU RdRp OS=Beihai barnacle virus 13 OX=1922357 PE=4 SV=1
MM1 pKa = 7.66DD2 pKa = 4.59TSTSQPSDD10 pKa = 3.44EE11 pKa = 4.79RR12 pKa = 11.84EE13 pKa = 3.92SAPTHH18 pKa = 5.79FRR20 pKa = 11.84SSSNNKK26 pKa = 9.09QNSTNQSGRR35 pKa = 11.84GGARR39 pKa = 11.84RR40 pKa = 11.84RR41 pKa = 11.84GRR43 pKa = 11.84ASSEE47 pKa = 3.66KK48 pKa = 10.32HH49 pKa = 5.04NEE51 pKa = 3.64AMRR54 pKa = 11.84KK55 pKa = 7.57FHH57 pKa = 7.2GPSQLQAYY65 pKa = 7.93RR66 pKa = 11.84AQLASNNFLDD76 pKa = 5.1LAEE79 pKa = 5.33LSQQLASLASASTPLTVKK97 pKa = 10.76LPATTRR103 pKa = 11.84GLAEE107 pKa = 4.17AVLGGYY113 pKa = 10.25HH114 pKa = 5.5MAFRR118 pKa = 11.84LTKK121 pKa = 10.13EE122 pKa = 4.07PPISLNAFYY131 pKa = 10.58RR132 pKa = 11.84VTLAQFEE139 pKa = 4.39LQAIRR144 pKa = 11.84SQLRR148 pKa = 11.84DD149 pKa = 3.41HH150 pKa = 6.86NISLRR155 pKa = 11.84QYY157 pKa = 9.62HH158 pKa = 5.45YY159 pKa = 11.03EE160 pKa = 3.95EE161 pKa = 5.15FFAKK165 pKa = 10.14YY166 pKa = 10.57ASFEE170 pKa = 4.39QIVAAHH176 pKa = 7.0PATLKK181 pKa = 10.93LVVAVIEE188 pKa = 4.25QYY190 pKa = 9.96GTVSVGGKK198 pKa = 7.82TYY200 pKa = 11.09SPFIVDD206 pKa = 4.9SNVDD210 pKa = 2.87WSVEE214 pKa = 3.52VRR216 pKa = 11.84ARR218 pKa = 11.84RR219 pKa = 11.84RR220 pKa = 11.84GHH222 pKa = 6.4RR223 pKa = 11.84ATGASTSALPHH234 pKa = 6.3RR235 pKa = 11.84VLEE238 pKa = 4.82DD239 pKa = 3.16GGEE242 pKa = 4.27RR243 pKa = 11.84ILEE246 pKa = 4.11VRR248 pKa = 11.84KK249 pKa = 10.62GMGPDD254 pKa = 3.55PYY256 pKa = 10.81TVTFRR261 pKa = 11.84NLEE264 pKa = 3.87NVVRR268 pKa = 11.84VMSDD272 pKa = 3.1EE273 pKa = 4.03NSVLEE278 pKa = 3.94GRR280 pKa = 11.84KK281 pKa = 8.53WFVEE285 pKa = 3.83NNPLPGARR293 pKa = 11.84YY294 pKa = 9.24DD295 pKa = 4.45DD296 pKa = 4.67RR297 pKa = 11.84YY298 pKa = 11.29VLQNPDD304 pKa = 4.36EE305 pKa = 4.37IWPPNYY311 pKa = 9.54TDD313 pKa = 4.29ASLSHH318 pKa = 6.74EE319 pKa = 4.36FQLLEE324 pKa = 3.79AWISRR329 pKa = 11.84LSGKK333 pKa = 10.2FSYY336 pKa = 9.43LTGRR340 pKa = 11.84LSYY343 pKa = 10.4SGKK346 pKa = 10.15GSEE349 pKa = 4.16AMSVGTLTDD358 pKa = 3.1SHH360 pKa = 6.87IATTLPQHH368 pKa = 4.93VTISEE373 pKa = 4.32SEE375 pKa = 4.01TNYY378 pKa = 11.3ALDD381 pKa = 4.53IISDD385 pKa = 3.6QSMLLGTLSRR395 pKa = 11.84WRR397 pKa = 11.84EE398 pKa = 3.66YY399 pKa = 10.31PDD401 pKa = 3.77YY402 pKa = 11.33SRR404 pKa = 11.84LPDD407 pKa = 3.35NVTTVDD413 pKa = 3.27PRR415 pKa = 11.84LYY417 pKa = 10.3EE418 pKa = 4.12INSQSGAVRR427 pKa = 11.84KK428 pKa = 9.5IVADD432 pKa = 3.33WHH434 pKa = 6.33ALTAAVLARR443 pKa = 11.84PVV445 pKa = 2.95

Molecular weight: 49.67 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A1L3KLI1|A0A1L3KLI1_9VIRU RdRp OS=Beihai barnacle virus 13 OX=1922357 PE=4 SV=1
MM1 pKa = 7.47FSLPRR6 pKa = 11.84GKK8 pKa = 10.93GFGQYY13 pKa = 9.76HH14 pKa = 5.85AGEE17 pKa = 4.35RR18 pKa = 11.84RR19 pKa = 11.84QTPYY23 pKa = 10.71LPEE26 pKa = 4.0ITDD29 pKa = 3.42IPYY32 pKa = 10.07HH33 pKa = 6.55RR34 pKa = 11.84SAVTLSAIRR43 pKa = 11.84SDD45 pKa = 3.6LKK47 pKa = 11.21QFGTTQKK54 pKa = 10.25IEE56 pKa = 3.94YY57 pKa = 8.94TPTLKK62 pKa = 10.75AAIADD67 pKa = 3.79AYY69 pKa = 10.13KK70 pKa = 10.55EE71 pKa = 3.99FGIGDD76 pKa = 3.76VKK78 pKa = 10.37MLHH81 pKa = 6.63LNDD84 pKa = 2.84VMTYY88 pKa = 10.12KK89 pKa = 10.84GVDD92 pKa = 2.44IWNRR96 pKa = 11.84SPGLPWRR103 pKa = 11.84QHH105 pKa = 4.56GYY107 pKa = 6.99KK108 pKa = 9.74TKK110 pKa = 11.05GEE112 pKa = 4.36VVSDD116 pKa = 3.58MDD118 pKa = 3.75AQRR121 pKa = 11.84SIRR124 pKa = 11.84WFWHH128 pKa = 5.95RR129 pKa = 11.84IKK131 pKa = 10.97DD132 pKa = 3.99GAQMRR137 pKa = 11.84APDD140 pKa = 3.86CSAFTRR146 pKa = 11.84SHH148 pKa = 4.78VCKK151 pKa = 10.62VGEE154 pKa = 4.18EE155 pKa = 4.0KK156 pKa = 10.86VRR158 pKa = 11.84AVWGYY163 pKa = 10.21PMTITMGEE171 pKa = 4.02AVFAIPLIEE180 pKa = 4.44AYY182 pKa = 9.26KK183 pKa = 10.91ARR185 pKa = 11.84GSPIAYY191 pKa = 9.36GYY193 pKa = 9.05EE194 pKa = 3.69ISVGGARR201 pKa = 11.84KK202 pKa = 9.55IFRR205 pKa = 11.84DD206 pKa = 3.49MQTSEE211 pKa = 4.5FKK213 pKa = 10.83AALDD217 pKa = 3.92LEE219 pKa = 4.98SFDD222 pKa = 4.53KK223 pKa = 10.66RR224 pKa = 11.84VPRR227 pKa = 11.84QLIEE231 pKa = 3.78HH232 pKa = 6.93AFDD235 pKa = 4.64ILAQNINFMEE245 pKa = 4.05YY246 pKa = 9.32RR247 pKa = 11.84DD248 pKa = 3.79RR249 pKa = 11.84GIADD253 pKa = 3.07VRR255 pKa = 11.84RR256 pKa = 11.84NIRR259 pKa = 11.84MWEE262 pKa = 3.8YY263 pKa = 10.56LKK265 pKa = 10.67QYY267 pKa = 10.78FLDD270 pKa = 3.93TPVRR274 pKa = 11.84LCTGEE279 pKa = 4.85RR280 pKa = 11.84YY281 pKa = 9.64LKK283 pKa = 10.67RR284 pKa = 11.84GGVPSGSYY292 pKa = 7.81FTQLVDD298 pKa = 4.59SIVNYY303 pKa = 10.24ILVVWLAYY311 pKa = 10.04EE312 pKa = 4.1LTGKK316 pKa = 9.86KK317 pKa = 9.52PRR319 pKa = 11.84YY320 pKa = 8.34LKK322 pKa = 11.17VMGDD326 pKa = 3.68DD327 pKa = 4.55SIAGLDD333 pKa = 3.88SPFHH337 pKa = 6.29LHH339 pKa = 6.36EE340 pKa = 5.25ADD342 pKa = 3.28ALLRR346 pKa = 11.84TVGMKK351 pKa = 10.82LNVPKK356 pKa = 10.66SILSKK361 pKa = 10.88DD362 pKa = 3.68VADD365 pKa = 4.15LTFLGYY371 pKa = 10.41KK372 pKa = 9.12INNGIPSRR380 pKa = 11.84PFDD383 pKa = 3.17KK384 pKa = 10.56WIASLVYY391 pKa = 10.31PEE393 pKa = 5.08TEE395 pKa = 3.99DD396 pKa = 4.77EE397 pKa = 4.31SWDD400 pKa = 3.85DD401 pKa = 3.37VATRR405 pKa = 11.84ALGLLYY411 pKa = 10.54ANCGVDD417 pKa = 3.26SSFDD421 pKa = 3.48RR422 pKa = 11.84LCRR425 pKa = 11.84HH426 pKa = 7.13IINFKK431 pKa = 10.61PFDD434 pKa = 3.66LHH436 pKa = 7.62ISRR439 pKa = 11.84SLSRR443 pKa = 11.84LLWSLGVTGLDD454 pKa = 3.14KK455 pKa = 10.96AVPSSLDD462 pKa = 3.32FYY464 pKa = 11.63LRR466 pKa = 11.84LLL468 pKa = 3.98

Molecular weight: 53.39 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

2

0

2

913

445

468

456.5

51.53

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

7.996 ± 0.698

0.548 ± 0.385

5.805 ± 0.921

5.367 ± 0.65

3.834 ± 0.483

6.572 ± 0.513

2.629 ± 0.206

4.929 ± 1.095

4.491 ± 1.103

9.529 ± 0.064

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.081 ± 0.357

3.395 ± 0.773

4.819 ± 0.088

3.395 ± 0.615

7.777 ± 0.22

8.543 ± 1.419

5.586 ± 0.654

6.462 ± 0.196

1.752 ± 0.284

4.491 ± 0.313
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski