Enterovibrio sp. CAIM 600

Taxonomy: cellular organisms; Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales; Vibrionaceae; Enterovibrio; unclassified Enterovibrio

Average proteome isoelectric point is 6.14

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 4013 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A4Q0YMC7|A0A4Q0YMC7_9GAMM Thiol-disulfide oxidoreductase OS=Enterovibrio sp. CAIM 600 OX=1278244 GN=CS022_20475 PE=4 SV=1
MM1 pKa = 7.6VYY3 pKa = 9.59TLNRR7 pKa = 11.84DD8 pKa = 3.23DD9 pKa = 5.25SGYY12 pKa = 8.89LTASDD17 pKa = 4.23TVTDD21 pKa = 4.09TLTLTATDD29 pKa = 4.07GTQQQITISITGTDD43 pKa = 3.19TTAIISGNKK52 pKa = 9.13QSTLLKK58 pKa = 10.14TEE60 pKa = 4.17TTASGTVSLFDD71 pKa = 5.15PDD73 pKa = 5.51ASTQPTLPNQTHH85 pKa = 6.77IGTYY89 pKa = 8.58GTLTTNSDD97 pKa = 3.75GTWSYY102 pKa = 11.7VVDD105 pKa = 4.54PSAIKK110 pKa = 10.49ALNDD114 pKa = 3.81DD115 pKa = 4.56EE116 pKa = 4.44QTQDD120 pKa = 3.23TFAVTASDD128 pKa = 3.67GSEE131 pKa = 3.69HH132 pKa = 6.63QIIITVTGDD141 pKa = 2.84EE142 pKa = 4.33DD143 pKa = 4.57ASVISGVTSGSVAEE157 pKa = 5.08DD158 pKa = 3.73DD159 pKa = 4.83ADD161 pKa = 5.97LIAQGQLSITDD172 pKa = 3.75EE173 pKa = 4.39DD174 pKa = 4.79TNDD177 pKa = 3.59SPSLINTTLTGQYY190 pKa = 9.1GTFDD194 pKa = 4.52LNNGHH199 pKa = 5.85WTFTANNSALQPLDD213 pKa = 3.39QGQTAQDD220 pKa = 3.64TFTVNASDD228 pKa = 4.11GNSEE232 pKa = 4.53LVTITLTGVEE242 pKa = 4.57DD243 pKa = 3.88ASSVGGTHH251 pKa = 6.51TGSVTEE257 pKa = 4.14NSLGPFSISAGALATGATTTSNTSSHH283 pKa = 5.38IQIAGVPYY291 pKa = 10.44ILTTNVGYY299 pKa = 10.76NGLVTFHH306 pKa = 6.97RR307 pKa = 11.84VEE309 pKa = 3.96NDD311 pKa = 3.15GSVTEE316 pKa = 4.24SDD318 pKa = 3.2RR319 pKa = 11.84MFYY322 pKa = 10.64DD323 pKa = 3.82SSQGTVATTLSGSITSDD340 pKa = 3.31VQSFGLPLDD349 pKa = 3.85ALGNGLTASNIYY361 pKa = 10.51DD362 pKa = 3.43VTGQTTLFLTSQNSGSISVWHH383 pKa = 6.81ISDD386 pKa = 3.24TGEE389 pKa = 4.07LSFHH393 pKa = 6.25GGKK396 pKa = 7.97TFGHH400 pKa = 5.88SQPSTNGGIVRR411 pKa = 11.84EE412 pKa = 4.27NILYY416 pKa = 7.5EE417 pKa = 4.26APGGTFYY424 pKa = 10.54IYY426 pKa = 10.05ATRR429 pKa = 11.84PQNDD433 pKa = 4.14RR434 pKa = 11.84IDD436 pKa = 3.65VLTYY440 pKa = 10.95NPTTGAISEE449 pKa = 4.41TGTTISAGDD458 pKa = 3.75NVSSLDD464 pKa = 3.87LLTHH468 pKa = 6.94GGNTYY473 pKa = 10.71LFSASNDD480 pKa = 3.54TLNVYY485 pKa = 10.59AIDD488 pKa = 3.99EE489 pKa = 4.79SNGGLTLEE497 pKa = 4.43TSNTFDD503 pKa = 3.66LGSNHH508 pKa = 6.24SVNTHH513 pKa = 3.73QTEE516 pKa = 4.23NGDD519 pKa = 3.98SFILASGDD527 pKa = 3.63DD528 pKa = 3.81NKK530 pKa = 10.46ISHH533 pKa = 7.6LYY535 pKa = 9.33QLEE538 pKa = 4.04NDD540 pKa = 3.82GSITQRR546 pKa = 11.84DD547 pKa = 3.92SLDD550 pKa = 3.32SGFSYY555 pKa = 10.42HH556 pKa = 7.34SSPTEE561 pKa = 3.73VDD563 pKa = 2.65NHH565 pKa = 6.84LIFVCEE571 pKa = 4.2SEE573 pKa = 4.3SGGVDD578 pKa = 3.95LFTIGANHH586 pKa = 7.31RR587 pKa = 11.84FQHH590 pKa = 6.03LKK592 pKa = 10.25HH593 pKa = 6.45LSGFDD598 pKa = 3.33NDD600 pKa = 4.32DD601 pKa = 3.7AVPQLVVTEE610 pKa = 4.32NGNFYY615 pKa = 10.73LVDD618 pKa = 3.3INGVFTSQALTITDD632 pKa = 4.59LTPQATGTLTISDD645 pKa = 4.47PDD647 pKa = 4.09ANDD650 pKa = 3.19TPTFQNTNVDD660 pKa = 3.34GTYY663 pKa = 11.07GSLSLTDD670 pKa = 3.69GTWFIAQQHH679 pKa = 5.73IALRR683 pKa = 11.84PP684 pKa = 3.36

Molecular weight: 72.05 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A4Q0YMZ2|A0A4Q0YMZ2_9GAMM Lysine transporter LysE OS=Enterovibrio sp. CAIM 600 OX=1278244 GN=CS022_19805 PE=4 SV=1
MM1 pKa = 7.45KK2 pKa = 9.51RR3 pKa = 11.84TFQPSVLKK11 pKa = 10.49RR12 pKa = 11.84KK13 pKa = 7.97RR14 pKa = 11.84THH16 pKa = 5.89GFRR19 pKa = 11.84ARR21 pKa = 11.84MATKK25 pKa = 10.34NGRR28 pKa = 11.84KK29 pKa = 9.74VIGARR34 pKa = 11.84RR35 pKa = 11.84AKK37 pKa = 10.13GRR39 pKa = 11.84KK40 pKa = 8.23QLSKK44 pKa = 11.23

Molecular weight: 5.14 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

4013

0

4013

1136605

16

5376

283.2

31.46

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

8.235 ± 0.046

1.064 ± 0.017

5.886 ± 0.044

6.324 ± 0.038

4.287 ± 0.029

6.834 ± 0.036

2.24 ± 0.022

6.113 ± 0.029

5.325 ± 0.037

10.079 ± 0.055

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.574 ± 0.023

4.342 ± 0.033

3.899 ± 0.025

4.067 ± 0.028

4.647 ± 0.037

7.197 ± 0.039

5.624 ± 0.049

7.039 ± 0.028

1.28 ± 0.016

2.941 ± 0.027
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski