Paenisporosarcina antarctica

Taxonomy: cellular organisms; Bacteria; Terrabacteria group; Firmicutes; Bacilli; Bacillales; Planococcaceae; Paenisporosarcina

Average proteome isoelectric point is 6.25

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 3570 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A4P7A3S5|A0A4P7A3S5_9BACL Uncharacterized protein OS=Paenisporosarcina antarctica OX=417367 GN=E2636_16840 PE=4 SV=1
MM1 pKa = 7.29FSGYY5 pKa = 10.94KK6 pKa = 10.18LIEE9 pKa = 3.92VDD11 pKa = 4.58GGDD14 pKa = 3.09LSGYY18 pKa = 10.03RR19 pKa = 11.84EE20 pKa = 4.23TNVVVDD26 pKa = 3.14IGYY29 pKa = 10.81GDD31 pKa = 3.54RR32 pKa = 11.84EE33 pKa = 3.97YY34 pKa = 10.38WAFTNEE40 pKa = 3.58YY41 pKa = 8.43GQLVRR46 pKa = 11.84VIADD50 pKa = 3.95EE51 pKa = 5.84IIIQDD56 pKa = 3.84DD57 pKa = 3.73SNEE60 pKa = 4.0PVLSSGRR67 pKa = 11.84YY68 pKa = 8.18YY69 pKa = 10.94SDD71 pKa = 3.3EE72 pKa = 4.16AKK74 pKa = 10.96VPGVEE79 pKa = 4.89SDD81 pKa = 3.87VLDD84 pKa = 4.29EE85 pKa = 4.17GHH87 pKa = 6.92IVADD91 pKa = 3.9SNGGVSNAYY100 pKa = 10.46NITPQNSTLNRR111 pKa = 11.84HH112 pKa = 5.47GDD114 pKa = 3.32QAYY117 pKa = 8.24MEE119 pKa = 4.23NVIRR123 pKa = 11.84SAGGATNFEE132 pKa = 4.75AIITYY137 pKa = 9.8PNTEE141 pKa = 3.94TQIPSSYY148 pKa = 10.51QYY150 pKa = 10.89TYY152 pKa = 10.69TLMGNEE158 pKa = 4.15IVDD161 pKa = 3.54TFDD164 pKa = 3.41NVNPDD169 pKa = 3.51EE170 pKa = 4.65VNTSLGLTEE179 pKa = 5.2SEE181 pKa = 4.72PSDD184 pKa = 3.45STSSNTNGDD193 pKa = 3.16ISSVDD198 pKa = 3.32TNGNGKK204 pKa = 7.9VTIKK208 pKa = 9.78EE209 pKa = 4.01AKK211 pKa = 9.84DD212 pKa = 3.22AGFSMPITSDD222 pKa = 2.65HH223 pKa = 6.27WLYY226 pKa = 11.35AYY228 pKa = 8.87MQDD231 pKa = 3.47NDD233 pKa = 3.77GDD235 pKa = 4.21GMVGEE240 pKa = 4.67

Molecular weight: 26.15 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A4P7A318|A0A4P7A318_9BACL SRPBCC family protein OS=Paenisporosarcina antarctica OX=417367 GN=E2636_17745 PE=4 SV=1
MM1 pKa = 7.35KK2 pKa = 9.42RR3 pKa = 11.84TYY5 pKa = 10.24QPNKK9 pKa = 8.16RR10 pKa = 11.84KK11 pKa = 9.54HH12 pKa = 5.99SKK14 pKa = 8.91VHH16 pKa = 5.68GFRR19 pKa = 11.84ARR21 pKa = 11.84MSSKK25 pKa = 9.98NGRR28 pKa = 11.84RR29 pKa = 11.84VLAARR34 pKa = 11.84RR35 pKa = 11.84RR36 pKa = 11.84KK37 pKa = 8.81GRR39 pKa = 11.84KK40 pKa = 8.75VLSAA44 pKa = 4.05

Molecular weight: 5.21 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

3570

0

3570

1051335

30

1549

294.5

33.02

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

6.901 ± 0.044

0.671 ± 0.012

5.098 ± 0.032

7.224 ± 0.045

4.648 ± 0.034

6.77 ± 0.037

2.12 ± 0.02

8.165 ± 0.041

6.597 ± 0.03

9.853 ± 0.045

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.889 ± 0.022

4.329 ± 0.035

3.544 ± 0.026

3.792 ± 0.029

3.941 ± 0.028

6.281 ± 0.028

5.643 ± 0.031

7.182 ± 0.032

1.021 ± 0.014

3.33 ± 0.024
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski