Malvastrum yellow vein virus-[Y47]

Taxonomy: Viruses; Monodnaviria; Shotokuvirae; Cressdnaviricota; Repensiviricetes; Geplafuvirales; Geminiviridae; Begomovirus; Malvastrum yellow vein virus

Average proteome isoelectric point is 7.76

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 6 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|Q8QKZ7|Q8QKZ7_9GEMI Protein V2 OS=Malvastrum yellow vein virus-[Y47] OX=222476 GN=AV2 PE=3 SV=1
MM1 pKa = 7.99WDD3 pKa = 3.38PLVNEE8 pKa = 4.72FPEE11 pKa = 4.61TVHH14 pKa = 6.81GFRR17 pKa = 11.84CMISIKK23 pKa = 10.21YY24 pKa = 9.32LQLLSEE30 pKa = 5.34GYY32 pKa = 10.46SPDD35 pKa = 3.25TVGYY39 pKa = 10.39DD40 pKa = 4.42LIRR43 pKa = 11.84EE44 pKa = 4.71LISILRR50 pKa = 11.84SRR52 pKa = 11.84NYY54 pKa = 9.91VEE56 pKa = 4.26ASCRR60 pKa = 11.84YY61 pKa = 7.53RR62 pKa = 11.84HH63 pKa = 6.36FYY65 pKa = 10.07PRR67 pKa = 11.84VEE69 pKa = 4.24GASSSEE75 pKa = 3.66LRR77 pKa = 11.84QPLLNPCNCPHH88 pKa = 7.01CPRR91 pKa = 11.84HH92 pKa = 6.15KK93 pKa = 9.94ISNVGEE99 pKa = 4.24QAHH102 pKa = 6.22EE103 pKa = 4.0PQTQNVQDD111 pKa = 3.9VQKK114 pKa = 11.07SS115 pKa = 3.37

Molecular weight: 13.32 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|Q8QKZ7|Q8QKZ7_9GEMI Protein V2 OS=Malvastrum yellow vein virus-[Y47] OX=222476 GN=AV2 PE=3 SV=1
MM1 pKa = 7.71SKK3 pKa = 10.35RR4 pKa = 11.84PADD7 pKa = 3.52IVISTPASKK16 pKa = 10.29VRR18 pKa = 11.84RR19 pKa = 11.84RR20 pKa = 11.84LNFDD24 pKa = 3.06SPYY27 pKa = 7.79STRR30 pKa = 11.84VTVPTVRR37 pKa = 11.84ATKK40 pKa = 10.64SRR42 pKa = 11.84MWANRR47 pKa = 11.84PMNRR51 pKa = 11.84KK52 pKa = 7.87PRR54 pKa = 11.84MYY56 pKa = 10.68RR57 pKa = 11.84MYY59 pKa = 10.44RR60 pKa = 11.84SPDD63 pKa = 3.21VPRR66 pKa = 11.84GCEE69 pKa = 4.34GPCKK73 pKa = 10.01VQSFEE78 pKa = 4.02SRR80 pKa = 11.84HH81 pKa = 5.54DD82 pKa = 3.51VVHH85 pKa = 6.75IGKK88 pKa = 9.41VMCISDD94 pKa = 3.67VTRR97 pKa = 11.84GTGLTHH103 pKa = 7.09RR104 pKa = 11.84VGKK107 pKa = 9.66RR108 pKa = 11.84FCVKK112 pKa = 9.94SVYY115 pKa = 10.52VLGKK119 pKa = 9.41IWMDD123 pKa = 3.39EE124 pKa = 4.08NIKK127 pKa = 10.76SKK129 pKa = 10.6NHH131 pKa = 5.54TNNVMFFLVRR141 pKa = 11.84DD142 pKa = 3.88RR143 pKa = 11.84RR144 pKa = 11.84PTGTPQDD151 pKa = 3.8FGDD154 pKa = 3.96VFNMFDD160 pKa = 4.34NEE162 pKa = 4.11PSTATVKK169 pKa = 10.61NMHH172 pKa = 7.07RR173 pKa = 11.84DD174 pKa = 3.2RR175 pKa = 11.84YY176 pKa = 8.85QVVRR180 pKa = 11.84KK181 pKa = 9.26WYY183 pKa = 8.07ATVTGGQYY191 pKa = 9.96GAKK194 pKa = 9.62EE195 pKa = 3.57QALVKK200 pKa = 10.7KK201 pKa = 9.39FVRR204 pKa = 11.84VNNYY208 pKa = 7.82VVYY211 pKa = 9.96NQQEE215 pKa = 3.8AGKK218 pKa = 10.08YY219 pKa = 8.01EE220 pKa = 4.07NHH222 pKa = 6.29SEE224 pKa = 4.11NALMLYY230 pKa = 7.58MACTHH235 pKa = 7.06ASNPVYY241 pKa = 9.86ATLKK245 pKa = 9.47IRR247 pKa = 11.84IYY249 pKa = 10.64FYY251 pKa = 11.34DD252 pKa = 3.32SVTNN256 pKa = 3.98

Molecular weight: 29.67 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

6

0

6

1116

99

362

186.0

21.3

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

5.108 ± 0.677

2.33 ± 0.484

4.749 ± 0.473

4.839 ± 0.649

4.391 ± 0.516

4.839 ± 0.38

3.674 ± 0.611

5.376 ± 1.008

6.183 ± 0.663

7.437 ± 1.117

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.778 ± 0.885

5.914 ± 0.374

6.004 ± 0.5

5.018 ± 0.736

6.452 ± 1.123

8.781 ± 1.304

5.556 ± 0.916

5.556 ± 1.525

1.344 ± 0.247

3.674 ± 0.67
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski