Anaerorhabdus furcosa

Taxonomy: cellular organisms;

Average proteome isoelectric point is 6.13

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 2330 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A1T4PSL3|A0A1T4PSL3_9FIRM Uncharacterized protein OS=Anaerorhabdus furcosa OX=118967 GN=SAMN02745191_2128 PE=4 SV=1
MM1 pKa = 7.1IQDD4 pKa = 3.64IFKK7 pKa = 10.91SFIVLGSCFLLSGCMQNQVNQDD29 pKa = 3.63LNVEE33 pKa = 4.25EE34 pKa = 4.36NQPEE38 pKa = 4.21EE39 pKa = 4.12FNEE42 pKa = 4.52GVEE45 pKa = 4.25QMMITATINEE55 pKa = 4.18IEE57 pKa = 4.21YY58 pKa = 10.6EE59 pKa = 4.82IILEE63 pKa = 4.37DD64 pKa = 3.88NNTTRR69 pKa = 11.84AFIDD73 pKa = 4.16LLPLTIQMDD82 pKa = 3.96DD83 pKa = 3.4LNNNEE88 pKa = 4.28KK89 pKa = 10.8YY90 pKa = 10.43FYY92 pKa = 10.81LDD94 pKa = 2.94AALPSDD100 pKa = 4.11SYY102 pKa = 11.77NPEE105 pKa = 4.17TIQPGDD111 pKa = 3.3FMLYY115 pKa = 10.66GNNCIVLFYY124 pKa = 11.07KK125 pKa = 10.55SFQSNFSYY133 pKa = 10.73TKK135 pKa = 10.64LGTIKK140 pKa = 9.77NTDD143 pKa = 3.4GLQVIAASTSIEE155 pKa = 4.06VTFAKK160 pKa = 10.6

Molecular weight: 18.19 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A1T4KSC1|A0A1T4KSC1_9FIRM 7 8-dihydropterin-6-yl-methyl-4-(Beta-D-ribofuranosyl)aminobenzene 5'-phosphate synthase OS=Anaerorhabdus furcosa OX=118967 GN=SAMN02745191_0682 PE=4 SV=1
MM1 pKa = 7.35KK2 pKa = 9.43RR3 pKa = 11.84TYY5 pKa = 10.14QPSKK9 pKa = 9.95RR10 pKa = 11.84KK11 pKa = 7.81HH12 pKa = 5.11QKK14 pKa = 8.48VHH16 pKa = 5.53GFRR19 pKa = 11.84ARR21 pKa = 11.84MKK23 pKa = 8.82TVGGRR28 pKa = 11.84KK29 pKa = 8.55VLARR33 pKa = 11.84RR34 pKa = 11.84RR35 pKa = 11.84SKK37 pKa = 10.63GRR39 pKa = 11.84KK40 pKa = 8.49ILSAA44 pKa = 4.02

Molecular weight: 5.19 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

2330

0

2330

723749

38

3129

310.6

35.14

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

5.77 ± 0.055

1.413 ± 0.019

5.544 ± 0.038

7.14 ± 0.069

4.711 ± 0.044

6.006 ± 0.059

1.736 ± 0.023

9.175 ± 0.043

7.672 ± 0.051

9.447 ± 0.049

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.824 ± 0.024

5.634 ± 0.048

2.915 ± 0.029

3.283 ± 0.04

3.259 ± 0.03

6.214 ± 0.036

5.479 ± 0.051

6.775 ± 0.048

0.747 ± 0.014

4.256 ± 0.04
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski