Aspergillus tubingensis (strain CBS 134.48)

Taxonomy: cellular organisms; Eukaryota; Opisthokonta; Fungi; Dikarya; Ascomycota; saccharomyceta; Pezizomycotina; leotiomyceta; Eurotiomycetes; Eurotiomycetidae; Eurotiales; Aspergillaceae; Aspergillus; Aspergillus tubingensis

Average proteome isoelectric point is 6.43

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 12319 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A1L9MX80|A0A1L9MX80_ASPTC NAD(P)-bd_dom domain-containing protein OS=Aspergillus tubingensis (strain CBS 134.48) OX=767770 GN=ASPTUDRAFT_125518 PE=4 SV=1
MM1 pKa = 6.89KK2 pKa = 9.88TYY4 pKa = 10.55GIWSTLATLGSFTLSSAKK22 pKa = 9.29TLNFVAHH29 pKa = 7.12EE30 pKa = 4.56DD31 pKa = 3.72DD32 pKa = 5.65DD33 pKa = 5.68LLFLSPDD40 pKa = 4.47LIRR43 pKa = 11.84DD44 pKa = 3.62ILSGEE49 pKa = 4.14PLRR52 pKa = 11.84TVFLTAGDD60 pKa = 3.85AGMGSDD66 pKa = 3.55YY67 pKa = 10.75WNSRR71 pKa = 11.84EE72 pKa = 4.11DD73 pKa = 3.59GSRR76 pKa = 11.84AAYY79 pKa = 10.58ARR81 pKa = 11.84MAVASNNWDD90 pKa = 3.14EE91 pKa = 4.21DD92 pKa = 4.09VIYY95 pKa = 11.19VGDD98 pKa = 3.94KK99 pKa = 10.37TISLYY104 pKa = 10.02TLQDD108 pKa = 3.76DD109 pKa = 5.22DD110 pKa = 5.76DD111 pKa = 5.1ISLAFMHH118 pKa = 6.84LPDD121 pKa = 4.93GNMDD125 pKa = 3.31GTGFGGTDD133 pKa = 3.76QNDD136 pKa = 3.81SLQKK140 pKa = 10.82LWDD143 pKa = 3.55GDD145 pKa = 3.14IDD147 pKa = 4.19VIRR150 pKa = 11.84TIDD153 pKa = 3.57GSGVEE158 pKa = 4.13YY159 pKa = 10.3TRR161 pKa = 11.84DD162 pKa = 3.39EE163 pKa = 4.31LLEE166 pKa = 4.35TIAALIDD173 pKa = 4.57DD174 pKa = 5.25FDD176 pKa = 5.85PDD178 pKa = 3.61EE179 pKa = 4.89VKK181 pKa = 10.28TGDD184 pKa = 3.6YY185 pKa = 11.43VNDD188 pKa = 4.35FGDD191 pKa = 4.38GDD193 pKa = 4.1HH194 pKa = 7.19SDD196 pKa = 4.11HH197 pKa = 6.56YY198 pKa = 9.99ATGYY202 pKa = 10.41FVDD205 pKa = 4.5NALQQADD212 pKa = 3.87SDD214 pKa = 4.31ADD216 pKa = 3.51LTGYY220 pKa = 10.02YY221 pKa = 10.2GYY223 pKa = 9.34PIQNMDD229 pKa = 3.52VNLDD233 pKa = 3.65DD234 pKa = 6.3SDD236 pKa = 5.69IEE238 pKa = 4.29DD239 pKa = 3.65KK240 pKa = 11.42TNIFYY245 pKa = 10.61EE246 pKa = 4.16YY247 pKa = 10.63AGYY250 pKa = 8.18DD251 pKa = 3.49TATCATDD258 pKa = 3.84DD259 pKa = 3.99ACSSRR264 pKa = 11.84PEE266 pKa = 4.27SAWLQRR272 pKa = 11.84EE273 pKa = 4.24YY274 pKa = 11.31EE275 pKa = 4.13LL276 pKa = 5.67

Molecular weight: 30.59 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A1L9N8R7|A0A1L9N8R7_ASPTC Uncharacterized protein OS=Aspergillus tubingensis (strain CBS 134.48) OX=767770 GN=ASPTUDRAFT_927216 PE=4 SV=1
MM1 pKa = 7.56IPTHH5 pKa = 4.89STLRR9 pKa = 11.84RR10 pKa = 11.84RR11 pKa = 11.84SAVRR15 pKa = 11.84SRR17 pKa = 11.84KK18 pKa = 9.78ASVIRR23 pKa = 11.84RR24 pKa = 11.84NFKK27 pKa = 10.39VVTTSGMIRR36 pKa = 11.84RR37 pKa = 11.84SHH39 pKa = 5.98SPFWLLRR46 pKa = 11.84LPVSLIFQVV55 pKa = 3.28

Molecular weight: 6.45 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

12318

1

12319

5835640

49

6265

473.7

52.5

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

8.387 ± 0.021

1.329 ± 0.009

5.603 ± 0.014

6.074 ± 0.021

3.755 ± 0.013

6.79 ± 0.02

2.466 ± 0.01

4.995 ± 0.016

4.411 ± 0.017

9.17 ± 0.023

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.198 ± 0.008

3.591 ± 0.011

6.023 ± 0.024

3.996 ± 0.014

6.104 ± 0.019

8.315 ± 0.025

6.055 ± 0.015

6.265 ± 0.016

1.521 ± 0.008

2.953 ± 0.011
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski