Sulfuricurvum sp. MLSB

Taxonomy: cellular organisms; Bacteria; Proteobacteria; delta/epsilon subdivisions; Epsilonproteobacteria; Campylobacterales; Thiovulaceae; Sulfuricurvum; unclassified Sulfuricurvum

Average proteome isoelectric point is 6.17

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 2005 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A091ANL1|A0A091ANL1_9PROT Protease HtpX homolog OS=Sulfuricurvum sp. MLSB OX=1537917 GN=htpX PE=3 SV=1
MM1 pKa = 7.23MNATKK6 pKa = 10.42LRR8 pKa = 11.84VMQAIFSLSDD18 pKa = 3.04EE19 pKa = 4.49TEE21 pKa = 4.13YY22 pKa = 11.36NIYY25 pKa = 10.25EE26 pKa = 4.22ADD28 pKa = 5.09DD29 pKa = 3.36IAEE32 pKa = 4.33YY33 pKa = 11.26ARR35 pKa = 11.84MDD37 pKa = 3.88ADD39 pKa = 3.45QVRR42 pKa = 11.84TIVSEE47 pKa = 4.39LYY49 pKa = 10.53DD50 pKa = 3.43EE51 pKa = 5.92GYY53 pKa = 10.68LGEE56 pKa = 4.72CMSIGDD62 pKa = 4.17DD63 pKa = 4.04GYY65 pKa = 10.7EE66 pKa = 3.73TFYY69 pKa = 11.32LNKK72 pKa = 9.93KK73 pKa = 8.88GRR75 pKa = 11.84ALIGMEE81 pKa = 3.93

Molecular weight: 9.28 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A091AM83|A0A091AM83_9PROT DNA polymerase III subunit gamma/tau OS=Sulfuricurvum sp. MLSB OX=1537917 GN=dnaX PE=3 SV=1
MM1 pKa = 7.21TKK3 pKa = 10.08SEE5 pKa = 4.11FRR7 pKa = 11.84SEE9 pKa = 3.94CTHH12 pKa = 6.49RR13 pKa = 11.84LKK15 pKa = 10.85NANRR19 pKa = 11.84STKK22 pKa = 10.19RR23 pKa = 11.84IRR25 pKa = 11.84DD26 pKa = 3.53AKK28 pKa = 8.81VRR30 pKa = 11.84RR31 pKa = 11.84MLQIVLKK38 pKa = 9.69EE39 pKa = 4.0LGPKK43 pKa = 9.58RR44 pKa = 11.84VLAFWPMEE52 pKa = 3.89FEE54 pKa = 3.96ADD56 pKa = 3.14IRR58 pKa = 11.84KK59 pKa = 9.65SLTTMRR65 pKa = 11.84RR66 pKa = 11.84WDD68 pKa = 3.56KK69 pKa = 11.27VYY71 pKa = 10.83LPFMDD76 pKa = 4.02GVSFKK81 pKa = 10.05MVPLRR86 pKa = 11.84LPLEE90 pKa = 4.25RR91 pKa = 11.84KK92 pKa = 9.81AFGIYY97 pKa = 9.43EE98 pKa = 4.12PRR100 pKa = 11.84DD101 pKa = 3.43SFRR104 pKa = 11.84KK105 pKa = 9.64INLIDD110 pKa = 3.66VAIVPAIGVDD120 pKa = 3.39ASLGRR125 pKa = 11.84IGFGKK130 pKa = 10.53GMYY133 pKa = 10.21DD134 pKa = 3.9RR135 pKa = 11.84FFPTLKK141 pKa = 9.52TKK143 pKa = 10.42PFTIFIQSCEE153 pKa = 3.79CRR155 pKa = 11.84TNRR158 pKa = 11.84FLCDD162 pKa = 3.93DD163 pKa = 3.82YY164 pKa = 11.86DD165 pKa = 3.75VRR167 pKa = 11.84SDD169 pKa = 4.93LLITPKK175 pKa = 10.5GVYY178 pKa = 9.61SMRR181 pKa = 11.84KK182 pKa = 5.42THH184 pKa = 6.0VKK186 pKa = 8.75RR187 pKa = 11.84TTRR190 pKa = 11.84GGRR193 pKa = 11.84HH194 pKa = 5.11SHH196 pKa = 6.14LQRR199 pKa = 11.84CSRR202 pKa = 11.84LFNFEE207 pKa = 3.41KK208 pKa = 10.68DD209 pKa = 3.5FRR211 pKa = 11.84RR212 pKa = 11.84SFF214 pKa = 3.32

Molecular weight: 25.31 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

2005

0

2005

577772

39

1558

288.2

32.23

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

8.426 ± 0.059

0.98 ± 0.024

5.529 ± 0.043

7.181 ± 0.059

4.513 ± 0.041

6.698 ± 0.051

2.307 ± 0.027

7.436 ± 0.054

6.211 ± 0.052

9.759 ± 0.06

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.813 ± 0.029

4.146 ± 0.045

3.582 ± 0.032

3.076 ± 0.029

4.812 ± 0.039

6.266 ± 0.04

5.239 ± 0.045

6.549 ± 0.045

0.83 ± 0.019

3.647 ± 0.034
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski