Human adenovirus B serotype 3 (HAdV-3) (Human adenovirus 3)

Taxonomy: Viruses; Varidnaviria; Bamfordvirae; Preplasmiviricota; Tectiliviricetes; Rowavirales; Adenoviridae; Mastadenovirus; Human mastadenovirus B

Average proteome isoelectric point is 6.76

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 46 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|Q2Y0F3|Q2Y0F3_ADE03 Isoform of Q2Y0F6 11 kDa protein OS=Human adenovirus B serotype 3 OX=45659 GN=E4 PE=4 SV=1
MM1 pKa = 7.12TLVSFILQTNSKK13 pKa = 8.71LTMLEE18 pKa = 4.05RR19 pKa = 11.84SAVTYY24 pKa = 7.35CICIPTVLNVSLEE37 pKa = 4.12NFSFIQFLQEE47 pKa = 3.9TLPDD51 pKa = 4.12YY52 pKa = 10.8ISSNFDD58 pKa = 4.36DD59 pKa = 3.7ITGGSQYY66 pKa = 11.16AYY68 pKa = 10.73SNLVFAGANWGGLRR82 pKa = 11.84LYY84 pKa = 9.61CTVASPAIVPGGLLAKK100 pKa = 10.48QFGDD104 pKa = 3.16NMRR107 pKa = 11.84EE108 pKa = 3.87YY109 pKa = 10.83LQLEE113 pKa = 4.09LRR115 pKa = 11.84EE116 pKa = 4.01EE117 pKa = 4.1LRR119 pKa = 11.84AKK121 pKa = 10.56GMSIDD126 pKa = 4.34DD127 pKa = 5.14AILNLLQVTQEE138 pKa = 3.78QDD140 pKa = 2.96ILSLL144 pKa = 3.83

Molecular weight: 16.03 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|Q2Y0H7|Q2Y0H7_ADE03 Isoform of Q2Y0H9 L2 protein pV OS=Human adenovirus B serotype 3 OX=45659 GN=L2 PE=3 SV=1
MM1 pKa = 7.77ALTCRR6 pKa = 11.84LRR8 pKa = 11.84VPITGYY14 pKa = 9.94RR15 pKa = 11.84GRR17 pKa = 11.84NSRR20 pKa = 11.84RR21 pKa = 11.84RR22 pKa = 11.84RR23 pKa = 11.84MLGRR27 pKa = 11.84GMRR30 pKa = 11.84RR31 pKa = 11.84HH32 pKa = 5.65RR33 pKa = 11.84RR34 pKa = 11.84RR35 pKa = 11.84RR36 pKa = 11.84AISRR40 pKa = 11.84RR41 pKa = 11.84LGGGFLPALIPIIAAAIGAIPGIASVAVQASQRR74 pKa = 11.84HH75 pKa = 4.3

Molecular weight: 8.33 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

21

25

46

12716

57

1122

276.4

31.06

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

7.18 ± 0.342

1.95 ± 0.249

5.025 ± 0.219

6.221 ± 0.356

3.688 ± 0.235

6.26 ± 0.305

2.375 ± 0.161

4.821 ± 0.265

4.042 ± 0.33

9.28 ± 0.385

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.792 ± 0.164

4.388 ± 0.346

6.795 ± 0.29

4.278 ± 0.242

7.148 ± 0.483

7.101 ± 0.393

6.158 ± 0.293

5.922 ± 0.221

1.29 ± 0.116

3.287 ± 0.249
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski