Aurantimonas manganoxydans (strain ATCC BAA-1229 / DSM 21871 / SI85-9A1)

Taxonomy: cellular organisms; Bacteria; Proteobacteria; Alphaproteobacteria; Hyphomicrobiales; Aurantimonadaceae; Aurantimonas; Aurantimonas manganoxydans

Average proteome isoelectric point is 6.3

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 3625 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|Q1YEJ7|Q1YEJ7_AURMS Putative exonuclease OS=Aurantimonas manganoxydans (strain ATCC BAA-1229 / DSM 21871 / SI85-9A1) OX=287752 GN=SI859A1_01078 PE=4 SV=1
MM1 pKa = 7.85TGGQDD6 pKa = 3.5MNIKK10 pKa = 10.36SLLLGSAAALVAVSGARR27 pKa = 11.84AADD30 pKa = 3.68VIMPVAPEE38 pKa = 3.71PVDD41 pKa = 3.52YY42 pKa = 11.42VRR44 pKa = 11.84VCDD47 pKa = 3.88VYY49 pKa = 10.81GTGFYY54 pKa = 10.01YY55 pKa = 9.98IPGTEE60 pKa = 3.92TCLSINGYY68 pKa = 8.74VRR70 pKa = 11.84FQYY73 pKa = 10.71NVAGGIEE80 pKa = 4.43DD81 pKa = 5.31DD82 pKa = 4.58FGNDD86 pKa = 4.01LLTNSDD92 pKa = 3.37GDD94 pKa = 3.77NYY96 pKa = 10.59QAGSVVRR103 pKa = 11.84VRR105 pKa = 11.84LNFDD109 pKa = 2.97ARR111 pKa = 11.84EE112 pKa = 3.94EE113 pKa = 4.57TEE115 pKa = 4.58LGTLRR120 pKa = 11.84AYY122 pKa = 10.59ARR124 pKa = 11.84VQAQNAGGAYY134 pKa = 10.65SNDD137 pKa = 2.71ASYY140 pKa = 11.86NMDD143 pKa = 3.2MGFIQLGGLTMGYY156 pKa = 10.52LDD158 pKa = 4.17TLWTEE163 pKa = 4.38GDD165 pKa = 3.77GLLTDD170 pKa = 3.6TDD172 pKa = 4.77LPVGDD177 pKa = 4.24YY178 pKa = 7.2QTNRR182 pKa = 11.84ISYY185 pKa = 8.18TYY187 pKa = 10.27AANGFTAALSLEE199 pKa = 4.47DD200 pKa = 4.45DD201 pKa = 3.67ATGNFAPDD209 pKa = 3.32VVGRR213 pKa = 11.84LAYY216 pKa = 10.19AGGWGSVYY224 pKa = 10.65LAGSYY229 pKa = 10.52DD230 pKa = 3.68EE231 pKa = 4.99QVDD234 pKa = 3.96GRR236 pKa = 11.84LLTPASFTAAAASGLQVNSAGVIVPASATFVSGIDD271 pKa = 3.34PTTDD275 pKa = 3.08DD276 pKa = 4.15GAFALKK282 pKa = 10.53AGLSLTDD289 pKa = 5.44LIAADD294 pKa = 4.24SEE296 pKa = 4.54LKK298 pKa = 10.46IEE300 pKa = 4.32GSYY303 pKa = 11.35AFDD306 pKa = 4.1PSSYY310 pKa = 9.69STIGLFSNRR319 pKa = 11.84ATLGTQLDD327 pKa = 4.97LLTGTLPVEE336 pKa = 4.11WQIGAGYY343 pKa = 9.37AQQFGKK349 pKa = 10.79LGVAVSGVYY358 pKa = 10.82GEE360 pKa = 4.52TFDD363 pKa = 3.68TYY365 pKa = 10.95RR366 pKa = 11.84YY367 pKa = 8.03TNATTFSNRR376 pKa = 11.84GDD378 pKa = 3.37GEE380 pKa = 4.46YY381 pKa = 10.82YY382 pKa = 10.8KK383 pKa = 11.07LVGNVGYY390 pKa = 10.47EE391 pKa = 3.6ITNNFDD397 pKa = 3.11MLAEE401 pKa = 4.15ISYY404 pKa = 11.49ANIDD408 pKa = 3.46FDD410 pKa = 4.09GQNGFVDD417 pKa = 3.57NSLDD421 pKa = 3.41QTAGFLRR428 pKa = 11.84FVRR431 pKa = 11.84SFF433 pKa = 3.04

Molecular weight: 45.97 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|Q1YI37|Q1YI37_AURMS Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase OS=Aurantimonas manganoxydans (strain ATCC BAA-1229 / DSM 21871 / SI85-9A1) OX=287752 GN=lpxA PE=3 SV=1
MM1 pKa = 6.75TAAIRR6 pKa = 11.84AAASWISWAVFPSSRR21 pKa = 11.84RR22 pKa = 11.84LPLAAPRR29 pKa = 11.84PRR31 pKa = 11.84RR32 pKa = 11.84HH33 pKa = 6.43RR34 pKa = 11.84SPPTHH39 pKa = 6.94RR40 pKa = 11.84ARR42 pKa = 11.84LRR44 pKa = 11.84RR45 pKa = 11.84CPTRR49 pKa = 11.84HH50 pKa = 5.7RR51 pKa = 11.84RR52 pKa = 11.84PRR54 pKa = 11.84PARR57 pKa = 11.84PPRR60 pKa = 11.84LRR62 pKa = 11.84RR63 pKa = 11.84SRR65 pKa = 11.84HH66 pKa = 4.15RR67 pKa = 11.84RR68 pKa = 11.84PRR70 pKa = 11.84KK71 pKa = 9.03FPHH74 pKa = 6.25RR75 pKa = 11.84PPRR78 pKa = 11.84QHH80 pKa = 7.44LSRR83 pKa = 11.84KK84 pKa = 8.6FLPTRR89 pKa = 11.84PRR91 pKa = 11.84MHH93 pKa = 7.06RR94 pKa = 11.84ASKK97 pKa = 8.29TRR99 pKa = 11.84RR100 pKa = 11.84PFRR103 pKa = 11.84PSRR106 pKa = 11.84SRR108 pKa = 11.84PQARR112 pKa = 11.84RR113 pKa = 11.84DD114 pKa = 3.58RR115 pKa = 11.84PTSRR119 pKa = 11.84PRR121 pKa = 11.84RR122 pKa = 11.84RR123 pKa = 11.84TASSASFAHH132 pKa = 6.65

Molecular weight: 15.88 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

3625

0

3625

1230513

62

3297

339.5

36.67

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

12.995 ± 0.056

0.86 ± 0.011

6.082 ± 0.036

5.842 ± 0.039

3.69 ± 0.025

8.941 ± 0.038

1.971 ± 0.021

5.125 ± 0.031

2.767 ± 0.034

9.671 ± 0.053

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.54 ± 0.019

2.339 ± 0.022

5.22 ± 0.032

2.86 ± 0.025

7.622 ± 0.044

5.37 ± 0.034

5.393 ± 0.027

7.42 ± 0.029

1.207 ± 0.015

2.084 ± 0.018
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski