Ulvibacter litoralis

Taxonomy: cellular organisms; Bacteria; FCB group; Bacteroidetes/Chlorobi group; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Ulvibacter

Average proteome isoelectric point is 6.29

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 3476 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A1G7CQV2|A0A1G7CQV2_9FLAO Uncharacterized protein OS=Ulvibacter litoralis OX=227084 GN=SAMN05421855_101507 PE=4 SV=1
MM1 pKa = 7.03NRR3 pKa = 11.84SVNYY7 pKa = 10.43LMVVTAMTLALVTQSCSSDD26 pKa = 4.91DD27 pKa = 4.26DD28 pKa = 3.95DD29 pKa = 4.76TDD31 pKa = 3.26IGNWTSRR38 pKa = 11.84SIFDD42 pKa = 3.43GAPRR46 pKa = 11.84SSAASFVIDD55 pKa = 3.71NIGYY59 pKa = 10.18VGTGYY64 pKa = 10.92DD65 pKa = 3.61GDD67 pKa = 5.5DD68 pKa = 3.61YY69 pKa = 11.54LTDD72 pKa = 3.89FWAYY76 pKa = 10.62DD77 pKa = 3.26IDD79 pKa = 4.59GDD81 pKa = 4.38FWVQKK86 pKa = 11.05ADD88 pKa = 3.63FPGIARR94 pKa = 11.84SSAVGFSVSNTGYY107 pKa = 10.37IGTGYY112 pKa = 10.27DD113 pKa = 3.11AEE115 pKa = 4.57AASEE119 pKa = 5.19LNDD122 pKa = 3.5FWAYY126 pKa = 10.69SPSSNSWTQKK136 pKa = 10.74ADD138 pKa = 3.67FSGGNRR144 pKa = 11.84RR145 pKa = 11.84GSVAFAVGEE154 pKa = 3.94KK155 pKa = 10.57GYY157 pKa = 10.34IGTGFDD163 pKa = 3.75GDD165 pKa = 3.8NDD167 pKa = 3.85RR168 pKa = 11.84KK169 pKa = 10.89DD170 pKa = 3.2FWEE173 pKa = 4.06YY174 pKa = 11.5SPTTDD179 pKa = 1.98EE180 pKa = 3.84WTEE183 pKa = 3.74VFGYY187 pKa = 10.36GGSKK191 pKa = 9.68RR192 pKa = 11.84RR193 pKa = 11.84YY194 pKa = 7.67ATTFTISDD202 pKa = 3.35KK203 pKa = 10.9VYY205 pKa = 10.97LVTGVNNGLYY215 pKa = 10.28VDD217 pKa = 5.02DD218 pKa = 3.89VWEE221 pKa = 4.44FTPATGEE228 pKa = 4.06WEE230 pKa = 4.34KK231 pKa = 11.56KK232 pKa = 10.23NDD234 pKa = 3.39LDD236 pKa = 4.43YY237 pKa = 11.86DD238 pKa = 3.56EE239 pKa = 6.35DD240 pKa = 5.08YY241 pKa = 11.51YY242 pKa = 10.3ITRR245 pKa = 11.84SNALGFSLNGLGYY258 pKa = 9.87VSCGYY263 pKa = 10.4SGGVLGSTWQYY274 pKa = 11.51NSVSDD279 pKa = 3.38TWEE282 pKa = 3.75EE283 pKa = 3.93LTALEE288 pKa = 3.99ATARR292 pKa = 11.84QDD294 pKa = 3.98AISFTSTNNKK304 pKa = 9.74AFVLLGRR311 pKa = 11.84SGSLYY316 pKa = 10.82LDD318 pKa = 3.49DD319 pKa = 4.45TYY321 pKa = 11.76EE322 pKa = 4.07FFPQEE327 pKa = 4.25EE328 pKa = 4.56LNEE331 pKa = 4.43DD332 pKa = 3.84DD333 pKa = 4.68

Molecular weight: 36.79 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A1G7F9G9|A0A1G7F9G9_9FLAO TIGR02757 family protein OS=Ulvibacter litoralis OX=227084 GN=SAMN05421855_102419 PE=4 SV=1
MM1 pKa = 7.69SKK3 pKa = 9.01RR4 pKa = 11.84TFQPSKK10 pKa = 9.13RR11 pKa = 11.84KK12 pKa = 9.48RR13 pKa = 11.84RR14 pKa = 11.84NKK16 pKa = 9.49HH17 pKa = 3.94GFRR20 pKa = 11.84EE21 pKa = 4.18RR22 pKa = 11.84MASVNGRR29 pKa = 11.84KK30 pKa = 9.17VLAARR35 pKa = 11.84RR36 pKa = 11.84AKK38 pKa = 9.87GRR40 pKa = 11.84KK41 pKa = 8.56KK42 pKa = 10.21ISVSSEE48 pKa = 3.74TRR50 pKa = 11.84HH51 pKa = 5.96KK52 pKa = 10.68KK53 pKa = 9.8

Molecular weight: 6.26 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

3476

0

3476

1153833

25

3179

331.9

37.24

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

6.683 ± 0.043

0.761 ± 0.014

5.509 ± 0.032

6.784 ± 0.038

5.182 ± 0.034

6.502 ± 0.04

1.712 ± 0.02

7.715 ± 0.041

7.308 ± 0.059

9.242 ± 0.043

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.094 ± 0.019

5.952 ± 0.041

3.406 ± 0.024

3.31 ± 0.022

3.241 ± 0.027

6.706 ± 0.035

6.485 ± 0.05

6.438 ± 0.03

0.983 ± 0.015

3.988 ± 0.03
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski