Acetilactobacillus jinshanensis

Taxonomy: cellular organisms; Bacteria; Terrabacteria group; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Acetilactobacillus

Average proteome isoelectric point is 8.42

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 1450 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A4P6ZLK8|A0A4P6ZLK8_9LACO Glutamine synthetase OS=Acetilactobacillus jinshanensis OX=1720083 GN=glnA PE=3 SV=1
MM1 pKa = 7.71EE2 pKa = 5.44SLNSNQQISLTDD14 pKa = 3.35KK15 pKa = 11.03DD16 pKa = 4.19GNTVVYY22 pKa = 10.65NVLLTFKK29 pKa = 10.09STDD32 pKa = 3.7FHH34 pKa = 7.77KK35 pKa = 10.62SYY37 pKa = 11.11ILIYY41 pKa = 10.07PDD43 pKa = 3.87GRR45 pKa = 11.84PEE47 pKa = 3.83NQQVGVRR54 pKa = 11.84AFALPPDD61 pKa = 4.48EE62 pKa = 6.21DD63 pKa = 3.91PANPQSGDD71 pKa = 3.36LMPIEE76 pKa = 4.42TQKK79 pKa = 10.54EE80 pKa = 3.64WDD82 pKa = 3.58MVEE85 pKa = 4.4SVLNTFINPNEE96 pKa = 3.88

Molecular weight: 10.86 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A4P6ZJS9|A0A4P6ZJS9_9LACO Pyruvate kinase OS=Acetilactobacillus jinshanensis OX=1720083 GN=pyk PE=3 SV=1
MM1 pKa = 7.29VKK3 pKa = 10.27RR4 pKa = 11.84PVSNNIKK11 pKa = 10.59CPFCGTTFYY20 pKa = 10.88RR21 pKa = 11.84SDD23 pKa = 3.26LSYY26 pKa = 11.24VDD28 pKa = 3.0SRR30 pKa = 11.84VYY32 pKa = 10.29LKK34 pKa = 10.77RR35 pKa = 11.84MKK37 pKa = 10.39NRR39 pKa = 11.84LEE41 pKa = 3.98IYY43 pKa = 10.24PLGKK47 pKa = 10.0NVAASPKK54 pKa = 10.02LKK56 pKa = 9.75QQHH59 pKa = 6.58PEE61 pKa = 3.79LLRR64 pKa = 11.84LEE66 pKa = 4.52MSACPNCHH74 pKa = 6.95RR75 pKa = 11.84ITVRR79 pKa = 11.84AVGIGDD85 pKa = 3.63QYY87 pKa = 10.79KK88 pKa = 9.04HH89 pKa = 5.79HH90 pKa = 7.0HH91 pKa = 6.23VFNIYY96 pKa = 10.03PRR98 pKa = 11.84FNADD102 pKa = 3.51PLPTYY107 pKa = 10.83VPDD110 pKa = 5.48QIRR113 pKa = 11.84QDD115 pKa = 3.46YY116 pKa = 10.65KK117 pKa = 10.58EE118 pKa = 4.13ANEE121 pKa = 4.25VYY123 pKa = 9.93EE124 pKa = 4.05VSPNSAAMLARR135 pKa = 11.84RR136 pKa = 11.84ILEE139 pKa = 4.1EE140 pKa = 4.79IIADD144 pKa = 4.73FYY146 pKa = 11.26HH147 pKa = 8.03IEE149 pKa = 4.19EE150 pKa = 4.86GDD152 pKa = 3.87LYY154 pKa = 11.25HH155 pKa = 7.78DD156 pKa = 5.41LDD158 pKa = 3.97QLRR161 pKa = 11.84HH162 pKa = 5.39KK163 pKa = 10.57QSNPRR168 pKa = 11.84VWQAIDD174 pKa = 3.43SIRR177 pKa = 11.84RR178 pKa = 11.84LGNIGAHH185 pKa = 4.36QTQNVDD191 pKa = 3.18NVFGNVSVKK200 pKa = 9.79GAKK203 pKa = 9.77EE204 pKa = 3.73IIGLIRR210 pKa = 11.84MVIHH214 pKa = 6.3DD215 pKa = 4.7TYY217 pKa = 11.77VEE219 pKa = 4.16DD220 pKa = 3.42HH221 pKa = 6.99LSRR224 pKa = 11.84HH225 pKa = 5.49LEE227 pKa = 3.81KK228 pKa = 10.94SVIRR232 pKa = 11.84SAKK235 pKa = 8.54KK236 pKa = 10.33LNYY239 pKa = 8.67QPHH242 pKa = 6.82YY243 pKa = 9.9YY244 pKa = 9.93PSDD247 pKa = 3.66EE248 pKa = 4.3NSQSSRR254 pKa = 11.84RR255 pKa = 11.84NYY257 pKa = 10.17RR258 pKa = 11.84SRR260 pKa = 11.84NTHH263 pKa = 5.84KK264 pKa = 10.61SYY266 pKa = 11.24SSHH269 pKa = 6.25NSNNANRR276 pKa = 11.84SKK278 pKa = 10.89SSNASRR284 pKa = 11.84GHH286 pKa = 4.22QQHH289 pKa = 6.66RR290 pKa = 11.84NNHH293 pKa = 5.31RR294 pKa = 11.84RR295 pKa = 11.84NQNNSRR301 pKa = 11.84RR302 pKa = 11.84EE303 pKa = 3.78NNRR306 pKa = 11.84RR307 pKa = 11.84SNQKK311 pKa = 10.1RR312 pKa = 11.84NIRR315 pKa = 11.84RR316 pKa = 11.84NSSTPKK322 pKa = 9.02RR323 pKa = 11.84NNYY326 pKa = 9.07RR327 pKa = 11.84KK328 pKa = 9.57QSRR331 pKa = 11.84PSNNRR336 pKa = 11.84KK337 pKa = 9.61SNQRR341 pKa = 11.84NSNSYY346 pKa = 10.75RR347 pKa = 11.84KK348 pKa = 6.69THH350 pKa = 6.56RR351 pKa = 11.84NNNYY355 pKa = 9.21RR356 pKa = 11.84RR357 pKa = 11.84STRR360 pKa = 11.84SRR362 pKa = 11.84EE363 pKa = 3.78RR364 pKa = 11.84NQQSRR369 pKa = 11.84SRR371 pKa = 11.84HH372 pKa = 3.77TQRR375 pKa = 11.84RR376 pKa = 11.84STRR379 pKa = 11.84HH380 pKa = 4.62SKK382 pKa = 10.32KK383 pKa = 10.29SRR385 pKa = 11.84VRR387 pKa = 11.84DD388 pKa = 3.4KK389 pKa = 11.26SFTIIQGKK397 pKa = 9.02

Molecular weight: 46.99 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

1450

0

1450

454499

39

6060

313.4

35.29

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

7.043 ± 0.159

0.676 ± 0.02

5.296 ± 0.06

3.411 ± 0.043

4.105 ± 0.062

6.306 ± 0.059

3.34 ± 0.043

7.507 ± 0.089

8.072 ± 0.099

8.995 ± 0.107

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.859 ± 0.045

5.988 ± 0.094

3.901 ± 0.048

4.162 ± 0.051

4.313 ± 0.079

6.681 ± 0.233

5.45 ± 0.06

6.774 ± 0.056

1.034 ± 0.021

4.086 ± 0.048
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski