Caulobacter phage Sansa

Taxonomy: Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Sansavirus; Caulobacter virus Sansa

Average proteome isoelectric point is 6.58

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 115 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A0K1LLY3|A0A0K1LLY3_9CAUD Uncharacterized protein OS=Caulobacter phage Sansa OX=1675600 GN=CPT_Sansa118 PE=4 SV=1
MM1 pKa = 8.16PINKK5 pKa = 9.34HH6 pKa = 4.85YY7 pKa = 10.71AVPGQPAVIVYY18 pKa = 10.42KK19 pKa = 10.85DD20 pKa = 3.8GVPSARR26 pKa = 11.84WPLDD30 pKa = 3.59AGPGAHH36 pKa = 6.8ACAAEE41 pKa = 3.99WAQQYY46 pKa = 10.28GGEE49 pKa = 4.14VHH51 pKa = 6.99EE52 pKa = 4.73YY53 pKa = 10.64DD54 pKa = 4.5GSLEE58 pKa = 4.71NSDD61 pKa = 3.31AWHH64 pKa = 6.68YY65 pKa = 11.26DD66 pKa = 2.48ADD68 pKa = 3.83ARR70 pKa = 11.84QLRR73 pKa = 11.84DD74 pKa = 3.55GNGLPVASDD83 pKa = 3.34VGPADD88 pKa = 3.21ARR90 pKa = 11.84TILSMQRR97 pKa = 11.84ALFEE101 pKa = 4.29MVDD104 pKa = 3.48TVPRR108 pKa = 11.84TGAVADD114 pKa = 4.83AYY116 pKa = 10.88NDD118 pKa = 3.67CARR121 pKa = 11.84ISLAGLRR128 pKa = 11.84GEE130 pKa = 4.22MCPAEE135 pKa = 4.48DD136 pKa = 4.66AAAEE140 pKa = 4.15DD141 pKa = 4.6PEE143 pKa = 4.29AEE145 pKa = 4.33RR146 pKa = 11.84IGEE149 pKa = 4.1VLTRR153 pKa = 11.84FLSYY157 pKa = 10.0EE158 pKa = 3.67AQAFHH163 pKa = 7.62EE164 pKa = 4.66DD165 pKa = 3.85TPIDD169 pKa = 3.98LADD172 pKa = 3.67LCTFIGEE179 pKa = 4.17VRR181 pKa = 11.84QDD183 pKa = 3.48LKK185 pKa = 11.15RR186 pKa = 11.84AMLSRR191 pKa = 11.84DD192 pKa = 3.5LATLPTAAEE201 pKa = 3.85LRR203 pKa = 11.84IHH205 pKa = 6.83IKK207 pKa = 10.59NGGVTDD213 pKa = 4.12VEE215 pKa = 4.57ASTEE219 pKa = 4.24LKK221 pKa = 10.72GLTIVTLDD229 pKa = 3.43YY230 pKa = 11.64DD231 pKa = 3.72NDD233 pKa = 3.31FTARR237 pKa = 11.84GLLHH241 pKa = 6.27MVNAAPDD248 pKa = 3.85GEE250 pKa = 4.43EE251 pKa = 3.93EE252 pKa = 4.15NFRR255 pKa = 11.84PVYY258 pKa = 10.37VVEE261 pKa = 3.93QTPMVRR267 pKa = 11.84ALPPILDD274 pKa = 4.21AEE276 pKa = 4.67DD277 pKa = 4.06DD278 pKa = 3.68QFDD281 pKa = 4.17AMFEE285 pKa = 3.94EE286 pKa = 5.21DD287 pKa = 3.45

Molecular weight: 31.32 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A0K1LMP2|A0A0K1LMP2_9CAUD Uncharacterized protein OS=Caulobacter phage Sansa OX=1675600 GN=CPT_Sansa64 PE=4 SV=1
MM1 pKa = 6.93TRR3 pKa = 11.84VSGRR7 pKa = 11.84YY8 pKa = 8.37PRR10 pKa = 11.84IPCVVFGCKK19 pKa = 9.74CGATCYY25 pKa = 10.01PPGVEE30 pKa = 4.31IICPKK35 pKa = 10.17HH36 pKa = 5.56YY37 pKa = 10.62RR38 pKa = 11.84LVDD41 pKa = 3.43KK42 pKa = 10.71SLKK45 pKa = 9.53RR46 pKa = 11.84LRR48 pKa = 11.84RR49 pKa = 11.84EE50 pKa = 3.25IRR52 pKa = 11.84RR53 pKa = 11.84AFIKK57 pKa = 10.56SGAGQSPSRR66 pKa = 11.84WIFEE70 pKa = 4.15DD71 pKa = 3.74LLWRR75 pKa = 11.84MIVEE79 pKa = 4.39QATHH83 pKa = 6.57RR84 pKa = 11.84AAGII88 pKa = 3.65

Molecular weight: 10.1 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

115

0

115

24848

47

1801

216.1

23.61

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

12.572 ± 0.532

0.893 ± 0.095

6.495 ± 0.199

6.395 ± 0.24

3.107 ± 0.113

7.956 ± 0.252

1.783 ± 0.138

4.648 ± 0.165

4.419 ± 0.188

8.395 ± 0.197

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.535 ± 0.129

3.042 ± 0.177

5.497 ± 0.348

3.69 ± 0.254

6.991 ± 0.238

5.32 ± 0.225

5.377 ± 0.244

6.89 ± 0.246

1.767 ± 0.123

2.226 ± 0.113
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski