Tessaracoccus flavus

Taxonomy: cellular organisms; Bacteria; Terrabacteria group; Actinobacteria; Actinomycetia; Propionibacteriales; Propionibacteriaceae; Tessaracoccus

Average proteome isoelectric point is 5.99

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 2784 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A1Q2CGY6|A0A1Q2CGY6_9ACTN Predicted ATP-dependent carboligase ATP-grasp superfamily OS=Tessaracoccus flavus OX=1610493 GN=RPIT_11610 PE=4 SV=1
MM1 pKa = 7.22ITFKK5 pKa = 10.97KK6 pKa = 10.59ALTATALASALLLTACGGDD25 pKa = 3.76GDD27 pKa = 5.22DD28 pKa = 4.67PAPGATDD35 pKa = 3.41PAMTTPAATSGEE47 pKa = 4.47TTGGEE52 pKa = 4.03TTGAGEE58 pKa = 4.29APAASGTINFFTDD71 pKa = 2.93KK72 pKa = 10.92AAWEE76 pKa = 4.11PSFEE80 pKa = 4.21EE81 pKa = 4.11MNAASGDD88 pKa = 3.27IDD90 pKa = 5.44LEE92 pKa = 4.18FTGYY96 pKa = 10.11SDD98 pKa = 3.4PVAYY102 pKa = 8.23DD103 pKa = 3.02TYY105 pKa = 10.73IRR107 pKa = 11.84QAFRR111 pKa = 11.84TDD113 pKa = 3.51DD114 pKa = 3.86KK115 pKa = 11.38PDD117 pKa = 3.27LFTWHH122 pKa = 6.9TGGKK126 pKa = 8.59LQEE129 pKa = 4.31LAEE132 pKa = 4.15QGLVAEE138 pKa = 4.98TTDD141 pKa = 2.62IWAEE145 pKa = 3.97AEE147 pKa = 4.31SEE149 pKa = 4.31GLVPEE154 pKa = 4.41GLKK157 pKa = 10.55DD158 pKa = 3.18QYY160 pKa = 11.38TYY162 pKa = 11.08DD163 pKa = 3.43GKK165 pKa = 10.78QYY167 pKa = 10.64CVPLNVAYY175 pKa = 9.29WAVYY179 pKa = 9.01YY180 pKa = 10.53NKK182 pKa = 10.22QIFDD186 pKa = 4.64DD187 pKa = 4.42NGLTPPTTWEE197 pKa = 3.77EE198 pKa = 4.43MEE200 pKa = 4.55TVMQTLRR207 pKa = 11.84DD208 pKa = 3.54AGVTPFHH215 pKa = 6.69QMNIIFEE222 pKa = 4.2FVYY225 pKa = 9.92FQALLAGQDD234 pKa = 3.34PDD236 pKa = 3.82TYY238 pKa = 11.26LGILDD243 pKa = 4.58GSASYY248 pKa = 10.69TDD250 pKa = 3.48EE251 pKa = 4.48DD252 pKa = 4.51VNVAVDD258 pKa = 3.11KK259 pKa = 10.26WEE261 pKa = 3.83EE262 pKa = 3.91MINRR266 pKa = 11.84GDD268 pKa = 4.03FIDD271 pKa = 4.47PGVTGDD277 pKa = 3.86PQALLMNGDD286 pKa = 2.8VAMAYY291 pKa = 10.11FGTFFTGQLTAIDD304 pKa = 3.95AVSGEE309 pKa = 4.41DD310 pKa = 3.18YY311 pKa = 11.14GIFMFPNLNPDD322 pKa = 3.46TEE324 pKa = 4.4EE325 pKa = 3.98QPMILEE331 pKa = 4.51TGPLCVGAGSEE342 pKa = 4.5NEE344 pKa = 4.16DD345 pKa = 3.33TALAYY350 pKa = 10.26SKK352 pKa = 9.62WWLTTDD358 pKa = 3.9AQTAWSQSRR367 pKa = 11.84GDD369 pKa = 3.36VSFNPNVEE377 pKa = 3.96IEE379 pKa = 4.21DD380 pKa = 4.39PEE382 pKa = 4.69LSALVEE388 pKa = 4.07AVNDD392 pKa = 3.88GTRR395 pKa = 11.84ILPRR399 pKa = 11.84YY400 pKa = 9.88LEE402 pKa = 4.73GSPQPVYY409 pKa = 10.6QLSTEE414 pKa = 4.05LFGAFVTSPSDD425 pKa = 3.26PRR427 pKa = 11.84GMQEE431 pKa = 4.13RR432 pKa = 11.84LQAAADD438 pKa = 4.48DD439 pKa = 4.27YY440 pKa = 10.85WAQQQ444 pKa = 3.0

Molecular weight: 48.29 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A1Q2CC96|A0A1Q2CC96_9ACTN Uncharacterized protein OS=Tessaracoccus flavus OX=1610493 GN=RPIT_02000 PE=4 SV=1
MM1 pKa = 7.4GSVIKK6 pKa = 10.42KK7 pKa = 8.47RR8 pKa = 11.84RR9 pKa = 11.84KK10 pKa = 9.22RR11 pKa = 11.84MAKK14 pKa = 9.41KK15 pKa = 9.99KK16 pKa = 9.77HH17 pKa = 5.81RR18 pKa = 11.84KK19 pKa = 8.55LLKK22 pKa = 8.44KK23 pKa = 9.1TRR25 pKa = 11.84IQRR28 pKa = 11.84RR29 pKa = 11.84RR30 pKa = 11.84AGKK33 pKa = 9.79

Molecular weight: 4.07 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

2784

0

2784

923675

33

12360

331.8

35.74

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

12.391 ± 0.065

0.675 ± 0.016

6.359 ± 0.041

5.908 ± 0.05

3.082 ± 0.031

8.849 ± 0.065

2.116 ± 0.03

4.291 ± 0.037

2.223 ± 0.032

10.227 ± 0.056

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.043 ± 0.027

2.149 ± 0.027

5.421 ± 0.038

2.979 ± 0.023

7.141 ± 0.074

5.609 ± 0.034

6.079 ± 0.076

8.818 ± 0.043

1.568 ± 0.022

2.073 ± 0.02
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski