Maize white line mosaic Satellite virus (MWLMV) (Satellite maize white line mosaic virus)

Taxonomy: Viruses; Riboviria; Aumaivirus; Maize aumaivirus 1

Average proteome isoelectric point is 9.14

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 1 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>sp|P29151|COAT_MWLMV Coat protein OS=Maize white line mosaic Satellite virus OX=31503 PE=4 SV=1
MM1 pKa = 7.33ATQLTTRR8 pKa = 11.84ARR10 pKa = 11.84RR11 pKa = 11.84ATRR14 pKa = 11.84VSRR17 pKa = 11.84KK18 pKa = 9.53GSQPASKK25 pKa = 10.36QDD27 pKa = 3.21VKK29 pKa = 11.23QVVKK33 pKa = 10.84SILGQSLEE41 pKa = 4.14HH42 pKa = 6.68KK43 pKa = 9.94RR44 pKa = 11.84ANLLLPPTVVNTTGNIYY61 pKa = 10.64CLTQFVIEE69 pKa = 4.6GDD71 pKa = 4.14GISQRR76 pKa = 11.84TGRR79 pKa = 11.84VINLEE84 pKa = 3.93QMVLRR89 pKa = 11.84YY90 pKa = 9.57RR91 pKa = 11.84RR92 pKa = 11.84TLDD95 pKa = 3.17TTSANSGFLRR105 pKa = 11.84YY106 pKa = 9.19IVFLDD111 pKa = 3.63TQNQGTLPAITDD123 pKa = 3.69VLSSLDD129 pKa = 3.38VSSGYY134 pKa = 10.2EE135 pKa = 3.74VLNAQQNRR143 pKa = 11.84FKK145 pKa = 11.03FLLDD149 pKa = 3.65EE150 pKa = 4.45VEE152 pKa = 4.53SLCASATNLSKK163 pKa = 11.2ASTLTFNQKK172 pKa = 9.22VQVHH176 pKa = 5.56YY177 pKa = 11.06GGAADD182 pKa = 3.86AATSNRR188 pKa = 11.84RR189 pKa = 11.84NAVFFLEE196 pKa = 5.03LSDD199 pKa = 4.58KK200 pKa = 10.94VATGPQTRR208 pKa = 11.84LGVQLKK214 pKa = 8.18FTDD217 pKa = 3.34AA218 pKa = 3.92

Molecular weight: 23.96 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>sp|P29151|COAT_MWLMV Coat protein OS=Maize white line mosaic Satellite virus OX=31503 PE=4 SV=1
MM1 pKa = 7.33ATQLTTRR8 pKa = 11.84ARR10 pKa = 11.84RR11 pKa = 11.84ATRR14 pKa = 11.84VSRR17 pKa = 11.84KK18 pKa = 9.53GSQPASKK25 pKa = 10.36QDD27 pKa = 3.21VKK29 pKa = 11.23QVVKK33 pKa = 10.84SILGQSLEE41 pKa = 4.14HH42 pKa = 6.68KK43 pKa = 9.94RR44 pKa = 11.84ANLLLPPTVVNTTGNIYY61 pKa = 10.64CLTQFVIEE69 pKa = 4.6GDD71 pKa = 4.14GISQRR76 pKa = 11.84TGRR79 pKa = 11.84VINLEE84 pKa = 3.93QMVLRR89 pKa = 11.84YY90 pKa = 9.57RR91 pKa = 11.84RR92 pKa = 11.84TLDD95 pKa = 3.17TTSANSGFLRR105 pKa = 11.84YY106 pKa = 9.19IVFLDD111 pKa = 3.63TQNQGTLPAITDD123 pKa = 3.69VLSSLDD129 pKa = 3.38VSSGYY134 pKa = 10.2EE135 pKa = 3.74VLNAQQNRR143 pKa = 11.84FKK145 pKa = 11.03FLLDD149 pKa = 3.65EE150 pKa = 4.45VEE152 pKa = 4.53SLCASATNLSKK163 pKa = 11.2ASTLTFNQKK172 pKa = 9.22VQVHH176 pKa = 5.56YY177 pKa = 11.06GGAADD182 pKa = 3.86AATSNRR188 pKa = 11.84RR189 pKa = 11.84NAVFFLEE196 pKa = 5.03LSDD199 pKa = 4.58KK200 pKa = 10.94VATGPQTRR208 pKa = 11.84LGVQLKK214 pKa = 8.18FTDD217 pKa = 3.34AA218 pKa = 3.92

Molecular weight: 23.96 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

1

0

1

218

218

218

218.0

23.96

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

8.257 ± 0.0

0.917 ± 0.0

4.587 ± 0.0

3.211 ± 0.0

4.128 ± 0.0

5.963 ± 0.0

0.917 ± 0.0

3.211 ± 0.0

4.587 ± 0.0

11.468 ± 0.0

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

0.917 ± 0.0

5.505 ± 0.0

2.294 ± 0.0

7.339 ± 0.0

7.339 ± 0.0

8.257 ± 0.0

10.092 ± 0.0

8.716 ± 0.0

0.0 ± 0.0

2.294 ± 0.0
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski