Prevotella veroralis F0319

Taxonomy: cellular organisms; Bacteria; FCB group; Bacteroidetes/Chlorobi group; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; Prevotella veroralis

Average proteome isoelectric point is 7.1

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 3037 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|C9MLU8|C9MLU8_9BACT Uncharacterized protein OS=Prevotella veroralis F0319 OX=649761 GN=HMPREF0973_00574 PE=4 SV=1
MM1 pKa = 7.95DD2 pKa = 5.77NISIFSIEE10 pKa = 4.03GVDD13 pKa = 4.41ARR15 pKa = 11.84EE16 pKa = 3.8ICNAQLGDD24 pKa = 3.89VLFAPCSVCDD34 pKa = 3.68KK35 pKa = 10.57WKK37 pKa = 10.79GDD39 pKa = 3.65YY40 pKa = 10.63PSDD43 pKa = 3.51EE44 pKa = 4.75FEE46 pKa = 4.19THH48 pKa = 4.77VNAMFDD54 pKa = 3.22

Molecular weight: 6.04 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|C9MPC1|C9MPC1_9BACT Uncharacterized protein OS=Prevotella veroralis F0319 OX=649761 GN=HMPREF0973_01459 PE=4 SV=1
MM1 pKa = 7.49KK2 pKa = 10.43KK3 pKa = 10.6AFLYY7 pKa = 9.76LKK9 pKa = 10.65NMPTCRR15 pKa = 11.84DD16 pKa = 3.09RR17 pKa = 11.84RR18 pKa = 11.84PRR20 pKa = 11.84LSARR24 pKa = 11.84ARR26 pKa = 11.84QICNQLPRR34 pKa = 11.84FMRR37 pKa = 11.84TDD39 pKa = 3.39EE40 pKa = 4.36GVCPYY45 pKa = 9.99FVVSFCIEE53 pKa = 3.72RR54 pKa = 11.84TIPISFRR61 pKa = 3.41

Molecular weight: 7.33 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

3037

0

3037

859322

32

3063

283.0

32.03

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

6.895 ± 0.047

1.261 ± 0.021

5.625 ± 0.034

6.082 ± 0.051

4.431 ± 0.032

6.514 ± 0.044

2.188 ± 0.022

6.845 ± 0.05

7.025 ± 0.048

9.09 ± 0.045

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.81 ± 0.023

5.155 ± 0.044

3.67 ± 0.025

3.751 ± 0.028

4.854 ± 0.039

6.189 ± 0.04

5.721 ± 0.042

6.312 ± 0.037

1.151 ± 0.019

4.43 ± 0.039
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski