Acinetobacter virus 133

Taxonomy: Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Tevenvirinae

Average proteome isoelectric point is 6.4

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 257 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|D9I693|D9I693_9CAUD Gp8 baseplate wedge subunit OS=Acinetobacter virus 133 OX=279006 GN=8 PE=4 SV=1
MM1 pKa = 7.34TLDD4 pKa = 3.49PQGPLLEE11 pKa = 4.55PVLEE15 pKa = 4.56GEE17 pKa = 4.16QFDD20 pKa = 3.88IEE22 pKa = 4.71FIGDD26 pKa = 3.52YY27 pKa = 7.4TTIDD31 pKa = 2.99IVLLDD36 pKa = 4.36FPDD39 pKa = 3.92TVTVTGNKK47 pKa = 8.28IHH49 pKa = 6.74GVFNLVFDD57 pKa = 5.52LPNQGLKK64 pKa = 10.47YY65 pKa = 9.94RR66 pKa = 11.84DD67 pKa = 3.31GMDD70 pKa = 3.34YY71 pKa = 11.39GSTSQFKK78 pKa = 10.24DD79 pKa = 3.44VPEE82 pKa = 4.63DD83 pKa = 3.51ADD85 pKa = 3.52IYY87 pKa = 10.97SYY89 pKa = 11.15SPPVGSIRR97 pKa = 11.84NYY99 pKa = 9.12NLRR102 pKa = 11.84VNITYY107 pKa = 10.17TDD109 pKa = 3.24IATGGGEE116 pKa = 3.76QSEE119 pKa = 4.79TIEE122 pKa = 4.39YY123 pKa = 9.99ILPVDD128 pKa = 3.85INYY131 pKa = 10.56SLYY134 pKa = 10.96AQALRR139 pKa = 11.84DD140 pKa = 4.03ALWQQQ145 pKa = 3.17

Molecular weight: 16.28 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|D9I5Z4|D9I5Z4_9CAUD Uncharacterized protein OS=Acinetobacter virus 133 OX=279006 GN=Acj133p028 PE=4 SV=1
MM1 pKa = 7.35IKK3 pKa = 10.16EE4 pKa = 4.36SPLMLSIRR12 pKa = 11.84TKK14 pKa = 11.01LDD16 pKa = 2.96WSINAVNSAQVEE28 pKa = 4.18INRR31 pKa = 11.84AGKK34 pKa = 9.13VKK36 pKa = 10.34RR37 pKa = 11.84RR38 pKa = 11.84LQHH41 pKa = 5.94RR42 pKa = 11.84QLSYY46 pKa = 9.36GNSRR50 pKa = 11.84VRR52 pKa = 11.84EE53 pKa = 3.93QAIKK57 pKa = 10.74EE58 pKa = 3.73MDD60 pKa = 3.16RR61 pKa = 11.84RR62 pKa = 11.84ILKK65 pKa = 9.4FARR68 pKa = 11.84LQQKK72 pKa = 10.24SLLDD76 pKa = 3.91RR77 pKa = 11.84NALSALYY84 pKa = 10.01VQLRR88 pKa = 11.84EE89 pKa = 4.23VKK91 pKa = 10.07NGHH94 pKa = 5.68SKK96 pKa = 10.44RR97 pKa = 11.84DD98 pKa = 3.29QAYY101 pKa = 9.38YY102 pKa = 9.81LHH104 pKa = 7.2QYY106 pKa = 7.16MLKK109 pKa = 10.48SGVLL113 pKa = 3.48

Molecular weight: 13.3 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

257

0

257

50748

35

1277

197.5

22.34

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

6.678 ± 0.212

1.188 ± 0.075

6.138 ± 0.118

6.215 ± 0.167

4.111 ± 0.111

6.111 ± 0.211

2.191 ± 0.113

6.95 ± 0.124

6.897 ± 0.193

8.247 ± 0.163

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.905 ± 0.101

5.547 ± 0.108

3.825 ± 0.093

3.943 ± 0.109

4.465 ± 0.099

6.142 ± 0.137

6.25 ± 0.24

6.779 ± 0.116

1.328 ± 0.059

4.091 ± 0.125
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski