Terrimonas sp. NS-102

Taxonomy: cellular organisms; Bacteria; FCB group; Bacteroidetes/Chlorobi group; Bacteroidetes; Chitinophagia; Chitinophagales; Chitinophagaceae; Terrimonas; unclassified Terrimonas

Average proteome isoelectric point is 6.99

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 5019 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A2T7Q2E9|A0A2T7Q2E9_9BACT IS66 family transposase OS=Terrimonas sp. NS-102 OX=2171976 GN=DC498_24570 PE=4 SV=1
MM1 pKa = 7.96RR2 pKa = 11.84YY3 pKa = 9.61IIFTILLFVQLGVYY17 pKa = 9.17AQSTGDD23 pKa = 3.63YY24 pKa = 10.08RR25 pKa = 11.84SKK27 pKa = 11.03QSGNWEE33 pKa = 4.06DD34 pKa = 3.29AGSWEE39 pKa = 4.63TYY41 pKa = 10.85NGTSWVAATNYY52 pKa = 6.7PTPSDD57 pKa = 3.39GTITIRR63 pKa = 11.84SPHH66 pKa = 7.0ILTQGSSFTINDD78 pKa = 3.06VTVEE82 pKa = 4.04VGATLNLNDD91 pKa = 4.25GNVNSSGSSTADD103 pKa = 2.98LRR105 pKa = 11.84VYY107 pKa = 9.73GTVNHH112 pKa = 6.51NANSQGGCPIFEE124 pKa = 4.43IYY126 pKa = 10.56NGGVYY131 pKa = 9.86NWNGGNYY138 pKa = 9.88ACNTIKK144 pKa = 10.42ILSGGTMNFNVSGNPYY160 pKa = 10.46LNEE163 pKa = 4.01TNITNDD169 pKa = 2.85GVINFNSGGFYY180 pKa = 10.58AAINTVWGNLVNNAGGVINKK200 pKa = 9.61NNDD203 pKa = 3.37NIFFASGSPFNFIQNGSLNINAGRR227 pKa = 11.84LHH229 pKa = 7.04IDD231 pKa = 3.13YY232 pKa = 10.96LNFSNTGQLSIANNAEE248 pKa = 4.5LVCSGTPLMLSGTLNVIEE266 pKa = 5.0KK267 pKa = 10.04VSPSNGSNVIISGNFSGNFSTVNLPIGYY295 pKa = 9.34SITVNPSDD303 pKa = 5.13VILNYY308 pKa = 10.39NDD310 pKa = 5.48DD311 pKa = 3.79MDD313 pKa = 6.87DD314 pKa = 4.84DD315 pKa = 4.52GVKK318 pKa = 10.76NKK320 pKa = 10.21DD321 pKa = 3.06DD322 pKa = 4.63CAPKK326 pKa = 10.61DD327 pKa = 3.64PNKK330 pKa = 9.35WRR332 pKa = 11.84SAEE335 pKa = 4.02FYY337 pKa = 10.18IDD339 pKa = 4.17KK340 pKa = 11.01DD341 pKa = 3.26SDD343 pKa = 3.91GYY345 pKa = 11.37DD346 pKa = 3.44GGKK349 pKa = 8.24HH350 pKa = 4.2TVCYY354 pKa = 9.37GQNIPSGYY362 pKa = 9.46IQTTKK367 pKa = 10.87GSDD370 pKa = 3.87CNDD373 pKa = 2.85NDD375 pKa = 4.55ANINPTTVWYY385 pKa = 10.62KK386 pKa = 10.87DD387 pKa = 3.35ADD389 pKa = 3.62NDD391 pKa = 4.49GYY393 pKa = 11.71SDD395 pKa = 3.8GTTKK399 pKa = 8.92TQCDD403 pKa = 3.31QPAGYY408 pKa = 9.59KK409 pKa = 10.36LKK411 pKa = 10.9AQLTATNGDD420 pKa = 4.3CKK422 pKa = 11.18DD423 pKa = 4.15DD424 pKa = 4.65DD425 pKa = 4.08ATIHH429 pKa = 6.62PGAPEE434 pKa = 3.61ICGNGIDD441 pKa = 4.59EE442 pKa = 5.21DD443 pKa = 4.77CDD445 pKa = 4.1SKK447 pKa = 11.74DD448 pKa = 3.62AVCVPTDD455 pKa = 3.29SDD457 pKa = 4.03GDD459 pKa = 4.09GVSDD463 pKa = 6.01NEE465 pKa = 4.44DD466 pKa = 3.67CSPNDD471 pKa = 3.21NKK473 pKa = 10.15VWRR476 pKa = 11.84TVTLYY481 pKa = 11.25ADD483 pKa = 4.38FDD485 pKa = 5.08SDD487 pKa = 3.78GKK489 pKa = 9.87PVAFGSEE496 pKa = 4.09VCIGADD502 pKa = 2.94IPQGYY507 pKa = 9.11SEE509 pKa = 5.4SPGSDD514 pKa = 3.51CDD516 pKa = 5.54DD517 pKa = 3.82NDD519 pKa = 3.41NTVWRR524 pKa = 11.84TAILYY529 pKa = 9.88IDD531 pKa = 3.97SDD533 pKa = 4.05RR534 pKa = 11.84DD535 pKa = 3.85GEE537 pKa = 4.68SVGAGIEE544 pKa = 4.0KK545 pKa = 10.57CIGNDD550 pKa = 2.72IPFGYY555 pKa = 8.87TEE557 pKa = 5.11SPGSDD562 pKa = 3.48CNDD565 pKa = 3.49NNPDD569 pKa = 3.4IYY571 pKa = 10.92HH572 pKa = 7.0GATEE576 pKa = 4.12ICDD579 pKa = 3.84GVDD582 pKa = 3.45NNCDD586 pKa = 3.4GQIDD590 pKa = 4.0EE591 pKa = 5.99GLLFWIYY598 pKa = 10.46PDD600 pKa = 4.36GDD602 pKa = 3.45GDD604 pKa = 4.53GYY606 pKa = 10.2GTEE609 pKa = 3.84EE610 pKa = 4.24GKK612 pKa = 10.29IYY614 pKa = 10.48SCNAPYY620 pKa = 10.55GYY622 pKa = 10.84ADD624 pKa = 4.5RR625 pKa = 11.84NGDD628 pKa = 4.75CKK630 pKa = 11.31DD631 pKa = 4.04DD632 pKa = 5.09DD633 pKa = 3.84NTINPGVEE641 pKa = 4.44EE642 pKa = 4.3ICDD645 pKa = 3.73DD646 pKa = 5.88GIDD649 pKa = 3.79NDD651 pKa = 4.45CDD653 pKa = 4.12GEE655 pKa = 4.05IDD657 pKa = 3.74EE658 pKa = 5.22GCSVSEE664 pKa = 3.8PTEE667 pKa = 4.71FYY669 pKa = 11.1SKK671 pKa = 9.55PTGDD675 pKa = 3.76LHH677 pKa = 7.35NVATWGVNPDD687 pKa = 3.35GSGTQPADD695 pKa = 3.86FGAGKK700 pKa = 8.29TFNLANRR707 pKa = 11.84AGNYY711 pKa = 8.47TMTGNWTVLGTLVNSSGSQLKK732 pKa = 10.43INGYY736 pKa = 6.21TLSLTTLTGAGTLTGSTTSSLIITGTGGGNFGNINFTSGGGMLKK780 pKa = 10.6AFTLNRR786 pKa = 11.84SGTGAAATIGTALAVYY802 pKa = 9.99DD803 pKa = 4.18VLTITSGALTTGGKK817 pKa = 8.08LTLKK821 pKa = 9.52STATNTARR829 pKa = 11.84VAPVTGTISGNVTVEE844 pKa = 3.79RR845 pKa = 11.84YY846 pKa = 9.59IPARR850 pKa = 11.84RR851 pKa = 11.84AWRR854 pKa = 11.84LMNAPVGGTQTINQAWQEE872 pKa = 4.27GVTTASPNPNPAPGYY887 pKa = 7.66GTYY890 pKa = 8.98VTVGSVANGFDD901 pKa = 4.01QNILGQSTSSLKK913 pKa = 10.96SFF915 pKa = 4.16

Molecular weight: 96.48 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A2T7QCI3|A0A2T7QCI3_9BACT Peptidase_M56 domain-containing protein OS=Terrimonas sp. NS-102 OX=2171976 GN=DC498_06575 PE=4 SV=1
MM1 pKa = 7.49FLFLIDD7 pKa = 4.05CNKK10 pKa = 9.9GHH12 pKa = 7.45ACRR15 pKa = 11.84SFRR18 pKa = 11.84QPAIFLYY25 pKa = 10.34RR26 pKa = 11.84YY27 pKa = 7.86LQKK30 pKa = 10.33PARR33 pKa = 11.84ARR35 pKa = 11.84DD36 pKa = 3.45LQYY39 pKa = 10.85IQLKK43 pKa = 10.22EE44 pKa = 3.88MLNNGLLSLVFSKK57 pKa = 10.83YY58 pKa = 10.34KK59 pKa = 10.13QVALQKK65 pKa = 10.04RR66 pKa = 11.84GYY68 pKa = 8.03TRR70 pKa = 11.84GVYY73 pKa = 10.47LIISNITFRR82 pKa = 11.84LLHH85 pKa = 5.5NHH87 pKa = 5.4SCRR90 pKa = 11.84SFKK93 pKa = 10.97

Molecular weight: 11.08 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

5019

0

5019

1778361

16

2923

354.3

39.79

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

7.511 ± 0.035

0.861 ± 0.011

5.302 ± 0.024

5.592 ± 0.031

4.885 ± 0.023

6.835 ± 0.033

1.855 ± 0.019

7.55 ± 0.031

7.222 ± 0.03

9.018 ± 0.031

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.306 ± 0.017

5.715 ± 0.03

3.871 ± 0.022

3.678 ± 0.019

3.93 ± 0.021

6.304 ± 0.026

5.768 ± 0.033

6.195 ± 0.024

1.339 ± 0.013

4.262 ± 0.024
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski