Fusobacterium phage Funu1

Taxonomy: Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; unclassified Myoviridae

Average proteome isoelectric point is 6.66

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 65 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A0E3Y6D7|A0A0E3Y6D7_9CAUD Uncharacterized protein OS=Fusobacterium phage Funu1 OX=1640977 GN=HMPREF1993_00015 PE=4 SV=1
MM1 pKa = 7.7KK2 pKa = 9.81EE3 pKa = 4.09FKK5 pKa = 10.08MKK7 pKa = 10.53AWLKK11 pKa = 10.63KK12 pKa = 7.39EE13 pKa = 3.82NKK15 pKa = 7.95MVSIIGIDD23 pKa = 3.64LNYY26 pKa = 10.64QYY28 pKa = 10.91IRR30 pKa = 11.84YY31 pKa = 9.46SDD33 pKa = 4.19DD34 pKa = 3.34GNLFKK39 pKa = 10.76DD40 pKa = 3.88DD41 pKa = 3.72YY42 pKa = 11.14KK43 pKa = 10.79IAEE46 pKa = 4.32FKK48 pKa = 10.77DD49 pKa = 3.25IEE51 pKa = 4.22LLQFTGAKK59 pKa = 9.85DD60 pKa = 3.22KK61 pKa = 11.31AGQEE65 pKa = 4.2VYY67 pKa = 10.06EE68 pKa = 4.7ADD70 pKa = 3.47VIKK73 pKa = 10.93FNDD76 pKa = 5.66GIDD79 pKa = 4.32DD80 pKa = 3.8IYY82 pKa = 11.75GLISYY87 pKa = 10.3DD88 pKa = 4.47DD89 pKa = 4.08EE90 pKa = 4.98DD91 pKa = 3.74AVYY94 pKa = 10.22CVSYY98 pKa = 11.25EE99 pKa = 3.95NVTEE103 pKa = 4.34HH104 pKa = 7.06LLNMAGNFEE113 pKa = 4.07IVGNIFEE120 pKa = 4.68NPNLHH125 pKa = 5.97EE126 pKa = 4.09QLGYY130 pKa = 11.04

Molecular weight: 15.12 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A0E3Y606|A0A0E3Y606_9CAUD Uncharacterized protein OS=Fusobacterium phage Funu1 OX=1640977 GN=HMPREF1993_00019 PE=4 SV=1
MM1 pKa = 7.36KK2 pKa = 10.4KK3 pKa = 10.07KK4 pKa = 10.38LRR6 pKa = 11.84EE7 pKa = 3.88LRR9 pKa = 11.84RR10 pKa = 11.84KK11 pKa = 10.01KK12 pKa = 10.78EE13 pKa = 3.78FVKK16 pKa = 10.56LCKK19 pKa = 10.07GALQRR24 pKa = 11.84NYY26 pKa = 10.44VYY28 pKa = 11.03GVFNRR33 pKa = 11.84NCVFKK38 pKa = 10.93RR39 pKa = 11.84KK40 pKa = 9.3GDD42 pKa = 3.33KK43 pKa = 9.89TRR45 pKa = 11.84FKK47 pKa = 10.76KK48 pKa = 10.27GVKK51 pKa = 10.0FMVLITLPKK60 pKa = 9.89IINSCLNTKK69 pKa = 9.8VKK71 pKa = 10.83AKK73 pKa = 9.99AKK75 pKa = 10.3KK76 pKa = 10.09RR77 pKa = 11.84GGKK80 pKa = 8.77NDD82 pKa = 3.31KK83 pKa = 10.67

Molecular weight: 9.76 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

65

0

65

11841

33

915

182.2

20.97

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

4.966 ± 0.501

0.971 ± 0.132

5.312 ± 0.234

9.307 ± 0.49

4.569 ± 0.183

5.329 ± 0.43

1.022 ± 0.094

9.644 ± 0.327

12.018 ± 0.502

8.504 ± 0.254

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.12 ± 0.122

6.976 ± 0.267

2.415 ± 0.271

2.66 ± 0.135

3.26 ± 0.186

5.793 ± 0.229

4.983 ± 0.278

5.0 ± 0.206

0.937 ± 0.096

4.214 ± 0.252
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski