Banna virus

Taxonomy: Viruses; Riboviria; Orthornavirae; Duplornaviricota; Resentoviricetes; Reovirales; Reoviridae; Sedoreovirinae; Seadornavirus

Average proteome isoelectric point is 6.36

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 12 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|B4Y052|B4Y052_9REOV VP8 OS=Banna virus OX=77763 PE=4 SV=1
MM1 pKa = 7.58NNGQATITRR10 pKa = 11.84IGRR13 pKa = 11.84NFEE16 pKa = 3.56IRR18 pKa = 11.84CRR20 pKa = 11.84HH21 pKa = 6.31LDD23 pKa = 3.38RR24 pKa = 11.84DD25 pKa = 3.97YY26 pKa = 11.43TLPLPNATSNDD37 pKa = 3.34NFLDD41 pKa = 4.43CIKK44 pKa = 10.76FITEE48 pKa = 4.04CVGFNYY54 pKa = 9.95VSSGFKK60 pKa = 10.61LSIDD64 pKa = 3.39INDD67 pKa = 3.76FQHH70 pKa = 6.83FNGNSTLLIGKK81 pKa = 6.81TKK83 pKa = 10.22IGPLILKK90 pKa = 9.61KK91 pKa = 10.56VRR93 pKa = 11.84SLPCCNDD100 pKa = 2.73ALFRR104 pKa = 11.84NEE106 pKa = 3.65FRR108 pKa = 11.84ILAKK112 pKa = 9.4MHH114 pKa = 6.73GILRR118 pKa = 11.84LKK120 pKa = 10.8NDD122 pKa = 3.56INGHH126 pKa = 5.51KK127 pKa = 10.31YY128 pKa = 9.91GVILEE133 pKa = 4.27RR134 pKa = 11.84CYY136 pKa = 10.84KK137 pKa = 10.5PNINFCNFVTAINDD151 pKa = 3.58LEE153 pKa = 4.48VFHH156 pKa = 7.05SSNPHH161 pKa = 5.99FLHH164 pKa = 7.5GDD166 pKa = 3.65ANPDD170 pKa = 3.6NIMSDD175 pKa = 2.81SDD177 pKa = 4.39GYY179 pKa = 11.32LKK181 pKa = 10.89LVDD184 pKa = 4.19PVCLLEE190 pKa = 4.24NQVNMVNVDD199 pKa = 3.77YY200 pKa = 11.23EE201 pKa = 4.54SLTQEE206 pKa = 3.9AEE208 pKa = 3.77KK209 pKa = 10.82KK210 pKa = 10.5VFVKK214 pKa = 10.73SLLLLVEE221 pKa = 4.43KK222 pKa = 10.44QLSASADD229 pKa = 3.63EE230 pKa = 4.89IYY232 pKa = 11.55VNLKK236 pKa = 7.26EE237 pKa = 4.53TNPSFNLEE245 pKa = 4.29CGLKK249 pKa = 9.49LTDD252 pKa = 4.93LLDD255 pKa = 5.21SIDD258 pKa = 3.76THH260 pKa = 8.08NSIHH264 pKa = 6.23WKK266 pKa = 10.7SMLNYY271 pKa = 9.51QPIMPEE277 pKa = 3.89LSVLNDD283 pKa = 3.14LTYY286 pKa = 11.22YY287 pKa = 9.89DD288 pKa = 3.87TGDD291 pKa = 3.55VKK293 pKa = 11.36DD294 pKa = 5.33LVTEE298 pKa = 4.51DD299 pKa = 5.48LDD301 pKa = 6.27DD302 pKa = 4.69EE303 pKa = 5.88DD304 pKa = 5.88DD305 pKa = 3.7VV306 pKa = 4.58

Molecular weight: 34.82 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|B4Y055|B4Y055_9REOV VP11 OS=Banna virus OX=77763 PE=4 SV=1
MM1 pKa = 7.93DD2 pKa = 4.23VLSKK6 pKa = 11.18SSLKK10 pKa = 10.48EE11 pKa = 3.7LLAHH15 pKa = 7.03LEE17 pKa = 4.06KK18 pKa = 10.52TPLEE22 pKa = 3.95EE23 pKa = 5.08AISYY27 pKa = 10.23KK28 pKa = 10.25IGTIPYY34 pKa = 8.23QNVFISRR41 pKa = 11.84NEE43 pKa = 4.28HH44 pKa = 5.74YY45 pKa = 10.61NQLYY49 pKa = 10.0PDD51 pKa = 3.95TTSLIDD57 pKa = 3.54GVSRR61 pKa = 11.84EE62 pKa = 4.0GQRR65 pKa = 11.84NVNGLIMSIISYY77 pKa = 9.13VVSGSGHH84 pKa = 6.27YY85 pKa = 9.77IPNIGSMLLRR95 pKa = 11.84RR96 pKa = 11.84SILDD100 pKa = 3.1ILTKK104 pKa = 10.3HH105 pKa = 6.06DD106 pKa = 3.68TGLVTNNLNYY116 pKa = 10.81GIIARR121 pKa = 11.84NLTVNKK127 pKa = 9.03MNCEE131 pKa = 3.59QRR133 pKa = 11.84KK134 pKa = 9.66RR135 pKa = 11.84MLICFKK141 pKa = 10.89LLAYY145 pKa = 9.8KK146 pKa = 10.52DD147 pKa = 4.31GNQNDD152 pKa = 3.94YY153 pKa = 11.14EE154 pKa = 4.51VYY156 pKa = 10.56LNQNIPLKK164 pKa = 10.6QIAPSFIPNDD174 pKa = 3.12MRR176 pKa = 11.84TVINNNDD183 pKa = 3.09QLGIVGIPVYY193 pKa = 10.52RR194 pKa = 11.84LTQSTEE200 pKa = 3.33LSIRR204 pKa = 11.84DD205 pKa = 4.2DD206 pKa = 3.48NAKK209 pKa = 10.12SYY211 pKa = 11.21KK212 pKa = 10.04LGYY215 pKa = 9.08VDD217 pKa = 4.72WYY219 pKa = 10.85NSNAFLRR226 pKa = 11.84EE227 pKa = 3.87RR228 pKa = 11.84NDD230 pKa = 3.35FNLLKK235 pKa = 10.89LKK237 pKa = 10.45DD238 pKa = 3.42RR239 pKa = 11.84NTRR242 pKa = 11.84YY243 pKa = 10.27GRR245 pKa = 11.84LIGWW249 pKa = 3.97

Molecular weight: 28.63 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

12

0

12

5979

184

1219

498.3

56.15

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

6.138 ± 0.638

1.254 ± 0.199

6.673 ± 0.358

5.135 ± 0.211

3.897 ± 0.243

5.503 ± 0.253

2.342 ± 0.222

6.857 ± 0.286

6.573 ± 0.37

9.282 ± 0.389

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.726 ± 0.112

6.958 ± 0.371

3.278 ± 0.315

3.061 ± 0.38

4.7 ± 0.284

7.242 ± 0.456

6.004 ± 0.504

7.459 ± 0.295

0.669 ± 0.125

4.248 ± 0.222
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski