Bat polyomavirus 6a

Taxonomy: Viruses; Monodnaviria; Shotokuvirae; Cossaviricota; Papovaviricetes; Sepolyvirales; Polyomaviridae; Betapolyomavirus; Acerodon celebensis polyomavirus 2

Average proteome isoelectric point is 5.62

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 4 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A0D5ZYL6|A0A0D5ZYL6_9POLY Small t antigen OS=Bat polyomavirus 6a OX=1623685 PE=4 SV=1
MM1 pKa = 7.31GALLAVLAEE10 pKa = 4.31VFDD13 pKa = 4.55LAATTGLSVDD23 pKa = 3.57SFLTGEE29 pKa = 4.4AFTTAEE35 pKa = 4.17VLQSHH40 pKa = 7.13IANLVTYY47 pKa = 9.75GGLSEE52 pKa = 5.27AEE54 pKa = 3.8ALAAAEE60 pKa = 4.48VSQEE64 pKa = 4.02AYY66 pKa = 10.37SALTSLTSNFPRR78 pKa = 11.84AFAALAGTEE87 pKa = 3.82ALAVGSLVIGSATAAALAPYY107 pKa = 8.79TFDD110 pKa = 3.22YY111 pKa = 8.75STPIANLNVDD121 pKa = 3.4MALQVWQPNWDD132 pKa = 4.25DD133 pKa = 3.23IFFPGVVPFARR144 pKa = 11.84IVNYY148 pKa = 9.84IDD150 pKa = 3.56PANWAAYY157 pKa = 9.76LYY159 pKa = 9.93QAVGRR164 pKa = 11.84YY165 pKa = 7.22FWEE168 pKa = 4.19TAQRR172 pKa = 11.84TGQHH176 pKa = 6.24LIEE179 pKa = 5.69HH180 pKa = 6.53EE181 pKa = 4.15VRR183 pKa = 11.84EE184 pKa = 4.32VARR187 pKa = 11.84EE188 pKa = 3.76VGQRR192 pKa = 11.84TVQSVSEE199 pKa = 3.87TLARR203 pKa = 11.84YY204 pKa = 9.22FEE206 pKa = 4.06NARR209 pKa = 11.84WAVSHH214 pKa = 6.78LSSNVYY220 pKa = 10.4SGLQNYY226 pKa = 7.06YY227 pKa = 10.03TEE229 pKa = 5.13LGPLRR234 pKa = 11.84PHH236 pKa = 5.8QVRR239 pKa = 11.84AVNRR243 pKa = 11.84RR244 pKa = 11.84LGRR247 pKa = 11.84EE248 pKa = 3.47LPTRR252 pKa = 11.84YY253 pKa = 9.72NLEE256 pKa = 3.98TPRR259 pKa = 11.84PQDD262 pKa = 3.09KK263 pKa = 10.96ASAQYY268 pKa = 8.41VTKK271 pKa = 10.7SDD273 pKa = 3.74APGGAHH279 pKa = 6.4QRR281 pKa = 11.84VTPDD285 pKa = 2.33WMLPLILGLYY295 pKa = 10.55GDD297 pKa = 4.68ITPSWEE303 pKa = 3.81ATLEE307 pKa = 4.05DD308 pKa = 3.98LEE310 pKa = 4.45EE311 pKa = 4.39EE312 pKa = 4.35EE313 pKa = 4.89EE314 pKa = 4.29EE315 pKa = 4.78EE316 pKa = 4.66EE317 pKa = 4.79NGPKK321 pKa = 9.81KK322 pKa = 10.36KK323 pKa = 10.22KK324 pKa = 9.31PRR326 pKa = 11.84RR327 pKa = 11.84GKK329 pKa = 10.15KK330 pKa = 5.74QTKK333 pKa = 9.91ANSNSSAA340 pKa = 3.2

Molecular weight: 37.34 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A0D5ZZ24|A0A0D5ZZ24_9POLY Large T antigen OS=Bat polyomavirus 6a OX=1623685 PE=4 SV=1
MM1 pKa = 7.66DD2 pKa = 4.87HH3 pKa = 7.31ALTRR7 pKa = 11.84EE8 pKa = 3.84EE9 pKa = 4.5SVRR12 pKa = 11.84LMQLLKK18 pKa = 11.02LPMEE22 pKa = 4.28QYY24 pKa = 11.86GNFSLMRR31 pKa = 11.84KK32 pKa = 9.53AFLRR36 pKa = 11.84EE37 pKa = 4.23CKK39 pKa = 10.0NLHH42 pKa = 6.42PDD44 pKa = 2.95KK45 pKa = 11.24GGNPEE50 pKa = 4.08LAKK53 pKa = 10.59EE54 pKa = 4.41LITLYY59 pKa = 10.67RR60 pKa = 11.84KK61 pKa = 10.23LEE63 pKa = 4.16EE64 pKa = 3.86QAPPYY69 pKa = 7.55GTPEE73 pKa = 3.51WDD75 pKa = 3.28RR76 pKa = 11.84WWEE79 pKa = 3.84EE80 pKa = 3.8FNDD83 pKa = 4.17LFCHH87 pKa = 5.08EE88 pKa = 4.52TFDD91 pKa = 4.9RR92 pKa = 11.84SDD94 pKa = 3.67DD95 pKa = 3.71EE96 pKa = 4.29EE97 pKa = 4.28EE98 pKa = 4.03QRR100 pKa = 11.84KK101 pKa = 8.95RR102 pKa = 11.84PASPEE107 pKa = 4.01SEE109 pKa = 4.47PEE111 pKa = 4.14CSQATPPKK119 pKa = 9.81KK120 pKa = 9.94KK121 pKa = 10.54KK122 pKa = 9.62KK123 pKa = 9.8DD124 pKa = 3.51HH125 pKa = 6.69PKK127 pKa = 11.04DD128 pKa = 3.55MPEE131 pKa = 4.59DD132 pKa = 3.57LQQFLSNAILSNKK145 pKa = 7.54TVSSFLIFTTAEE157 pKa = 4.16KK158 pKa = 9.98STLLYY163 pKa = 10.79GKK165 pKa = 10.29LRR167 pKa = 11.84DD168 pKa = 3.55RR169 pKa = 11.84FKK171 pKa = 10.01ATFVSRR177 pKa = 11.84HH178 pKa = 4.94KK179 pKa = 10.58QQGSDD184 pKa = 3.11GEE186 pKa = 4.39AFVFLITPSRR196 pKa = 11.84HH197 pKa = 4.53RR198 pKa = 11.84VSAINNFCNSLCSVSFIIVKK218 pKa = 9.98GVIKK222 pKa = 10.19EE223 pKa = 4.03YY224 pKa = 10.8NLYY227 pKa = 10.39VHH229 pKa = 6.95LCVEE233 pKa = 5.04PYY235 pKa = 10.91VKK237 pKa = 10.38LQEE240 pKa = 4.7SIPGGLSRR248 pKa = 11.84DD249 pKa = 3.68FFDD252 pKa = 4.47TPEE255 pKa = 3.82EE256 pKa = 3.88AAKK259 pKa = 10.37NVSWKK264 pKa = 9.92MIAEE268 pKa = 4.53FALDD272 pKa = 4.64LMCDD276 pKa = 4.07DD277 pKa = 4.91IFLLMGMYY285 pKa = 10.12KK286 pKa = 10.2EE287 pKa = 4.19FAEE290 pKa = 5.05DD291 pKa = 3.41PKK293 pKa = 11.48SCAKK297 pKa = 10.55CEE299 pKa = 3.77AKK301 pKa = 10.27IISDD305 pKa = 3.76HH306 pKa = 5.72FQNHH310 pKa = 4.18FHH312 pKa = 6.88HH313 pKa = 6.85YY314 pKa = 9.89EE315 pKa = 3.87NALLFLDD322 pKa = 4.82CRR324 pKa = 11.84NQKK327 pKa = 10.21AICQQAVDD335 pKa = 3.89GVIAHH340 pKa = 6.58RR341 pKa = 11.84RR342 pKa = 11.84VQTAQLSRR350 pKa = 11.84EE351 pKa = 3.93QQLAEE356 pKa = 3.92RR357 pKa = 11.84FKK359 pKa = 11.32KK360 pKa = 10.61LFEE363 pKa = 4.26KK364 pKa = 10.39MEE366 pKa = 4.3NLFGARR372 pKa = 11.84SKK374 pKa = 9.88VTLRR378 pKa = 11.84TYY380 pKa = 9.45MAGVAWFDD388 pKa = 3.69SLFPDD393 pKa = 4.28KK394 pKa = 11.0SFKK397 pKa = 10.6EE398 pKa = 3.84LLLDD402 pKa = 4.37FLEE405 pKa = 4.74CMVNNVPKK413 pKa = 10.08KK414 pKa = 10.23RR415 pKa = 11.84YY416 pKa = 8.33WFFTGPVNTGKK427 pKa = 7.57TTLAAALLDD436 pKa = 3.8LCGGKK441 pKa = 9.46SLNVNMPFEE450 pKa = 4.38KK451 pKa = 10.86LNFEE455 pKa = 4.68LGVAIDD461 pKa = 3.38QFMVIFEE468 pKa = 4.27DD469 pKa = 3.55VKK471 pKa = 11.36GQVSEE476 pKa = 4.31NKK478 pKa = 9.82NLPTGQGINNLDD490 pKa = 3.79HH491 pKa = 7.04LRR493 pKa = 11.84DD494 pKa = 3.89YY495 pKa = 11.54LDD497 pKa = 3.82GAVKK501 pKa = 10.66VNLEE505 pKa = 4.2KK506 pKa = 10.85KK507 pKa = 9.75HH508 pKa = 6.21LNKK511 pKa = 10.01KK512 pKa = 8.41SQIFPPGIVTANEE525 pKa = 3.9YY526 pKa = 10.32KK527 pKa = 10.82VPFTLRR533 pKa = 11.84VRR535 pKa = 11.84FCKK538 pKa = 9.96TLTFQFRR545 pKa = 11.84KK546 pKa = 10.01NLYY549 pKa = 8.98LSLRR553 pKa = 11.84KK554 pKa = 8.42TEE556 pKa = 4.53DD557 pKa = 2.94LGTYY561 pKa = 9.68RR562 pKa = 11.84VLQNGICLLLFLVYY576 pKa = 10.18HH577 pKa = 6.27CEE579 pKa = 3.76IEE581 pKa = 4.75DD582 pKa = 4.44FSEE585 pKa = 4.43CLHH588 pKa = 6.1KK589 pKa = 9.58TVEE592 pKa = 3.95QWKK595 pKa = 9.43EE596 pKa = 3.82RR597 pKa = 11.84ISQEE601 pKa = 3.86VSLGDD606 pKa = 3.63YY607 pKa = 11.19LDD609 pKa = 4.2FKK611 pKa = 11.84SNIQKK616 pKa = 10.66GNYY619 pKa = 8.55ILQTTEE625 pKa = 3.66SQGPSTQEE633 pKa = 3.91CEE635 pKa = 4.25TEE637 pKa = 4.27DD638 pKa = 3.99FVNN641 pKa = 3.91

Molecular weight: 74.15 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

4

0

4

1509

162

641

377.3

42.79

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

7.025 ± 1.657

2.319 ± 0.775

4.771 ± 0.403

7.753 ± 0.615

5.103 ± 0.938

5.5 ± 0.753

1.922 ± 0.382

3.777 ± 0.396

6.296 ± 1.191

10.404 ± 0.649

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

1.988 ± 0.285

5.036 ± 0.335

5.434 ± 0.898

4.705 ± 0.127

4.904 ± 0.318

5.898 ± 0.268

5.699 ± 0.653

6.494 ± 0.665

1.458 ± 0.429

3.512 ± 0.385
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski