Salipiger mucosus DSM 16094

Taxonomy: cellular organisms; Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Roseobacteraceae; Salipiger; Salipiger mucosus

Average proteome isoelectric point is 6.13

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 5583 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|S9R544|S9R544_9RHOB Peptide deformylase OS=Salipiger mucosus DSM 16094 OX=1123237 GN=def PE=3 SV=1
MM1 pKa = 7.86PEE3 pKa = 3.5AFLRR7 pKa = 11.84GVANLVRR14 pKa = 11.84GFDD17 pKa = 3.63RR18 pKa = 11.84LVSVAMSTHH27 pKa = 6.89PNGQANTQKK36 pKa = 10.75GEE38 pKa = 4.3SYY40 pKa = 9.37MATYY44 pKa = 10.22YY45 pKa = 11.17VSTTGSNANDD55 pKa = 3.87GSEE58 pKa = 4.08SSPFATINHH67 pKa = 6.26AVSSGLQPGDD77 pKa = 3.37TVLVKK82 pKa = 10.39PGTYY86 pKa = 9.3RR87 pKa = 11.84EE88 pKa = 4.09SVYY91 pKa = 11.35VNIDD95 pKa = 2.96GSAAGDD101 pKa = 3.15ITIRR105 pKa = 11.84SEE107 pKa = 4.29TPGAASIQPGSSGNGFTIEE126 pKa = 4.06GSYY129 pKa = 8.82ITIDD133 pKa = 3.23GFEE136 pKa = 4.21ITGSAYY142 pKa = 10.35HH143 pKa = 6.99GIEE146 pKa = 4.23AQNSHH151 pKa = 7.18HH152 pKa = 6.98ISMLNNISHH161 pKa = 7.62DD162 pKa = 3.79NGASGLSAIWGEE174 pKa = 4.18FYY176 pKa = 10.78LIEE179 pKa = 4.98GNTTYY184 pKa = 11.45GNAASDD190 pKa = 3.8WFSGISVYY198 pKa = 8.77EE199 pKa = 3.87NRR201 pKa = 11.84NITGDD206 pKa = 3.72TEE208 pKa = 4.33TTGYY212 pKa = 8.48RR213 pKa = 11.84TIIRR217 pKa = 11.84NNVSYY222 pKa = 11.51DD223 pKa = 3.2NVTEE227 pKa = 4.35NGQHH231 pKa = 5.92TDD233 pKa = 3.01GNGIIIDD240 pKa = 4.52DD241 pKa = 4.14FQSTQNSAFPSYY253 pKa = 10.25TYY255 pKa = 7.92PTLVEE260 pKa = 4.07NNLVYY265 pKa = 10.91EE266 pKa = 4.3NGGKK270 pKa = 10.14GIQVIWSDD278 pKa = 3.24NVTVRR283 pKa = 11.84GNTAYY288 pKa = 10.66HH289 pKa = 6.38NNQDD293 pKa = 3.83LQNTGTWRR301 pKa = 11.84GEE303 pKa = 3.68ISNSQSSNNTFVNNIAVVDD322 pKa = 4.15PSVHH326 pKa = 6.62PEE328 pKa = 3.36NTAIDD333 pKa = 3.72NNSYY337 pKa = 11.07GGYY340 pKa = 9.05TNDD343 pKa = 3.05NVVWANNLTYY353 pKa = 10.45TGTAGEE359 pKa = 4.59ASVKK363 pKa = 9.89TDD365 pKa = 3.61GGNAMPSAADD375 pKa = 3.72GNLLGVDD382 pKa = 4.38PGFIDD387 pKa = 3.7PGNDD391 pKa = 2.82FRR393 pKa = 11.84LSSGSVAIDD402 pKa = 3.93AGTDD406 pKa = 3.48DD407 pKa = 4.45YY408 pKa = 12.1GLASVDD414 pKa = 3.68LEE416 pKa = 4.04GTARR420 pKa = 11.84VEE422 pKa = 4.17GVVDD426 pKa = 3.6IGAYY430 pKa = 9.79EE431 pKa = 4.33RR432 pKa = 11.84DD433 pKa = 3.6SSGTPTPPANTAPEE447 pKa = 4.12ATNDD451 pKa = 3.51SGFSTTEE458 pKa = 3.55DD459 pKa = 3.19TAATIATADD468 pKa = 3.72LRR470 pKa = 11.84ANDD473 pKa = 3.86SDD475 pKa = 4.51ADD477 pKa = 3.86GDD479 pKa = 4.27ALTVTSVSGAVNGTVSLASASSVVFTPDD507 pKa = 2.62AGYY510 pKa = 10.99SGMASFDD517 pKa = 3.64YY518 pKa = 10.32TVSDD522 pKa = 4.06GAGGTDD528 pKa = 3.15TATVSIEE535 pKa = 3.84VTAASAPPSNTAPVATDD552 pKa = 3.32DD553 pKa = 4.26SGFATSEE560 pKa = 3.92DD561 pKa = 3.73TALSLKK567 pKa = 10.6PSMLKK572 pKa = 10.98DD573 pKa = 3.27NDD575 pKa = 3.28TDD577 pKa = 4.17ADD579 pKa = 4.21GDD581 pKa = 4.24SLTITNVSGAVNGTVSLAADD601 pKa = 3.78EE602 pKa = 4.77TVVFTPDD609 pKa = 2.81AGFTGMARR617 pKa = 11.84FDD619 pKa = 3.66YY620 pKa = 10.14TISDD624 pKa = 4.01GAGGTDD630 pKa = 3.2TAQAEE635 pKa = 4.63IQVSTAEE642 pKa = 4.22VTPPAPPEE650 pKa = 4.3DD651 pKa = 4.31DD652 pKa = 4.14EE653 pKa = 4.61EE654 pKa = 6.07AGSFSIWDD662 pKa = 3.51SSATPDD668 pKa = 4.27IMADD672 pKa = 3.19SDD674 pKa = 3.99TAAVTLGLRR683 pKa = 11.84FTADD687 pKa = 2.29VDD689 pKa = 3.88AALEE693 pKa = 3.88ALRR696 pKa = 11.84LYY698 pKa = 10.8VSEE701 pKa = 5.28ANTGTQSINLWSDD714 pKa = 2.48SGTRR718 pKa = 11.84LGQATAEE725 pKa = 4.27VTEE728 pKa = 4.9SGWSTVSFDD737 pKa = 5.48KK738 pKa = 10.8PLQLEE743 pKa = 4.01AGEE746 pKa = 5.17DD747 pKa = 4.24YY748 pKa = 10.57IASYY752 pKa = 9.49YY753 pKa = 10.15APNGGYY759 pKa = 9.52VVSEE763 pKa = 5.08DD764 pKa = 4.11YY765 pKa = 10.82FDD767 pKa = 4.0SASDD771 pKa = 3.44EE772 pKa = 4.48GPISLEE778 pKa = 4.16ANSGVYY784 pKa = 10.1SYY786 pKa = 11.82GSGGSSFPDD795 pKa = 2.97QSYY798 pKa = 10.8AFSNYY803 pKa = 7.35WVDD806 pKa = 4.23VVLTPDD812 pKa = 3.19TATDD816 pKa = 3.54VAGDD820 pKa = 3.78NVIGEE825 pKa = 4.54TGTVVAGQAGAGDD838 pKa = 3.92WTSVTFDD845 pKa = 4.1TPLEE849 pKa = 4.5DD850 pKa = 3.8PSVVMGGLTGNGANPYY866 pKa = 6.71TVRR869 pKa = 11.84VRR871 pKa = 11.84NVTDD875 pKa = 3.03TGFEE879 pKa = 4.08YY880 pKa = 10.72QIDD883 pKa = 4.15EE884 pKa = 4.6YY885 pKa = 11.24EE886 pKa = 4.54YY887 pKa = 11.23LDD889 pKa = 3.95DD890 pKa = 3.31WHH892 pKa = 6.0TTEE895 pKa = 4.8EE896 pKa = 4.29ISWLAVEE903 pKa = 5.02KK904 pKa = 9.54GTHH907 pKa = 4.97VLSDD911 pKa = 3.33GRR913 pKa = 11.84TISAGDD919 pKa = 3.6ASVGGSFAGISFDD932 pKa = 5.67DD933 pKa = 4.5GAFDD937 pKa = 3.62SAPVVLGQAVGEE949 pKa = 4.16ANAMAVTDD957 pKa = 3.98RR958 pKa = 11.84LRR960 pKa = 11.84SVSEE964 pKa = 3.9TGFEE968 pKa = 3.84ARR970 pKa = 11.84LFQQEE975 pKa = 4.09AATGSIEE982 pKa = 4.98AEE984 pKa = 4.07GFDD987 pKa = 4.59WIAVGQGGSATDD999 pKa = 3.6GALAGTSGNMVDD1011 pKa = 4.56HH1012 pKa = 7.22RR1013 pKa = 11.84PTTVDD1018 pKa = 3.63FDD1020 pKa = 4.46GSFSGEE1026 pKa = 4.21DD1027 pKa = 3.41FVMVTDD1033 pKa = 3.96MQTTNGWDD1041 pKa = 3.24VATLQTASLDD1051 pKa = 3.86DD1052 pKa = 3.91EE1053 pKa = 5.58SMVLRR1058 pKa = 11.84VLEE1061 pKa = 4.09EE1062 pKa = 3.7TSRR1065 pKa = 11.84DD1066 pKa = 3.39GEE1068 pKa = 4.3VRR1070 pKa = 11.84HH1071 pKa = 5.91VDD1073 pKa = 3.06EE1074 pKa = 5.41DD1075 pKa = 3.69AGFVGFEE1082 pKa = 3.93TGLIEE1087 pKa = 4.17GTPFEE1092 pKa = 4.89SDD1094 pKa = 3.03TVLL1097 pKa = 4.05

Molecular weight: 114.15 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|S9Q315|S9Q315_9RHOB L-fuconolactone hydrolase OS=Salipiger mucosus DSM 16094 OX=1123237 GN=Salmuc_01176 PE=4 SV=1
MM1 pKa = 7.45KK2 pKa = 9.61RR3 pKa = 11.84TFQPSNLVRR12 pKa = 11.84KK13 pKa = 9.18RR14 pKa = 11.84RR15 pKa = 11.84HH16 pKa = 4.42GFRR19 pKa = 11.84ARR21 pKa = 11.84MATKK25 pKa = 10.44AGRR28 pKa = 11.84KK29 pKa = 8.46VLNARR34 pKa = 11.84RR35 pKa = 11.84ARR37 pKa = 11.84GRR39 pKa = 11.84KK40 pKa = 8.79NLSAA44 pKa = 4.73

Molecular weight: 5.15 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

5583

0

5583

1630836

37

2149

292.1

31.71

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

12.472 ± 0.049

0.893 ± 0.011

6.174 ± 0.033

6.521 ± 0.029

3.564 ± 0.022

8.975 ± 0.038

2.091 ± 0.017

4.642 ± 0.028

2.614 ± 0.029

9.909 ± 0.037

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.741 ± 0.018

2.294 ± 0.02

5.295 ± 0.025

3.003 ± 0.02

7.493 ± 0.041

5.08 ± 0.026

5.399 ± 0.024

7.295 ± 0.029

1.402 ± 0.015

2.143 ± 0.016
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski