Lentilactobacillus curieae

Taxonomy: cellular organisms; Bacteria; Terrabacteria group; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lentilactobacillus

Average proteome isoelectric point is 6.45

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 1930 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A1S6QJE4|A0A1S6QJE4_9LACO Ribonuclease M5 OS=Lentilactobacillus curieae OX=1138822 GN=rnmV PE=3 SV=1
MM1 pKa = 7.53INLASAHH8 pKa = 5.1VVYY11 pKa = 9.01ATITGNNEE19 pKa = 3.5DD20 pKa = 3.54VADD23 pKa = 5.08IITEE27 pKa = 3.94HH28 pKa = 7.98LEE30 pKa = 3.93DD31 pKa = 4.38LGIDD35 pKa = 3.56VSEE38 pKa = 4.5TEE40 pKa = 4.57ISQTDD45 pKa = 3.37PSVFEE50 pKa = 5.27DD51 pKa = 3.25VDD53 pKa = 3.46ICIVCPYY60 pKa = 9.68TYY62 pKa = 10.69DD63 pKa = 3.35EE64 pKa = 4.73GALPEE69 pKa = 4.34EE70 pKa = 4.73GMDD73 pKa = 3.92FYY75 pKa = 11.69EE76 pKa = 5.79DD77 pKa = 4.92LPEE80 pKa = 5.83LDD82 pKa = 5.18LNGKK86 pKa = 9.27VYY88 pKa = 10.53GVAGSGDD95 pKa = 3.3TFYY98 pKa = 11.69EE99 pKa = 3.94EE100 pKa = 4.93FYY102 pKa = 11.4NLAVDD107 pKa = 3.9KK108 pKa = 10.89FDD110 pKa = 4.15AAFAKK115 pKa = 10.04TGATKK120 pKa = 10.34GAEE123 pKa = 3.99SVKK126 pKa = 10.52INLEE130 pKa = 4.04PGEE133 pKa = 4.18EE134 pKa = 4.51DD135 pKa = 3.86IANLDD140 pKa = 3.71KK141 pKa = 10.8FVEE144 pKa = 4.96AIVEE148 pKa = 4.07KK149 pKa = 10.97SKK151 pKa = 11.43

Molecular weight: 16.47 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A1S6QHU9|A0A1S6QHU9_9LACO Phosphate transport system permease protein OS=Lentilactobacillus curieae OX=1138822 GN=PL11_004215 PE=3 SV=1
MM1 pKa = 7.36KK2 pKa = 9.43RR3 pKa = 11.84TYY5 pKa = 9.69QPKK8 pKa = 8.19KK9 pKa = 7.37RR10 pKa = 11.84HH11 pKa = 5.5RR12 pKa = 11.84ARR14 pKa = 11.84VHH16 pKa = 5.84GFRR19 pKa = 11.84KK20 pKa = 10.03RR21 pKa = 11.84MSTSNGRR28 pKa = 11.84KK29 pKa = 8.01VLARR33 pKa = 11.84RR34 pKa = 11.84RR35 pKa = 11.84QKK37 pKa = 10.55GRR39 pKa = 11.84KK40 pKa = 8.96SLTAA44 pKa = 4.07

Molecular weight: 5.32 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

1930

0

1930

602619

39

3597

312.2

34.71

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

7.65 ± 0.153

0.401 ± 0.012

6.076 ± 0.061

5.615 ± 0.073

4.46 ± 0.046

6.898 ± 0.054

1.921 ± 0.021

7.318 ± 0.061

6.904 ± 0.057

9.058 ± 0.075

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.678 ± 0.032

5.291 ± 0.044

3.553 ± 0.029

3.925 ± 0.036

3.63 ± 0.042

6.755 ± 0.084

5.976 ± 0.041

7.426 ± 0.045

0.962 ± 0.021

3.502 ± 0.042
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski