Chimpanzee faeces associated microphage 2

Taxonomy: Viruses; Monodnaviria; Sangervirae; Phixviricota; Malgrandaviricetes; Petitvirales; Microviridae; unclassified Microviridae

Average proteome isoelectric point is 6.86

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 5 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A186YBX9|A0A186YBX9_9VIRU Minor CP 1 OS=Chimpanzee faeces associated microphage 2 OX=1676182 PE=4 SV=1
MM1 pKa = 7.98EE2 pKa = 4.94YY3 pKa = 8.97RR4 pKa = 11.84TIMNRR9 pKa = 11.84QRR11 pKa = 11.84ICSNSGSRR19 pKa = 11.84FAPTYY24 pKa = 9.58SLKK27 pKa = 9.44ITDD30 pKa = 5.23DD31 pKa = 3.73GNKK34 pKa = 10.48DD35 pKa = 3.34LVEE38 pKa = 4.14TGKK41 pKa = 10.48VDD43 pKa = 3.48VYY45 pKa = 11.66GKK47 pKa = 9.39IQTYY51 pKa = 9.9KK52 pKa = 9.58EE53 pKa = 3.98SCDD56 pKa = 2.84IHH58 pKa = 7.99VILEE62 pKa = 4.11RR63 pKa = 11.84FVNGDD68 pKa = 3.28EE69 pKa = 4.33SALNAGTPSFGDD81 pKa = 3.3FTEE84 pKa = 4.51YY85 pKa = 8.01PTTYY89 pKa = 11.25AEE91 pKa = 4.17MLQRR95 pKa = 11.84THH97 pKa = 6.0EE98 pKa = 4.2AEE100 pKa = 4.16EE101 pKa = 4.29MFMQLPLEE109 pKa = 4.21VRR111 pKa = 11.84AEE113 pKa = 4.32FNHH116 pKa = 6.2SPGEE120 pKa = 4.05FFTSIGSEE128 pKa = 4.08RR129 pKa = 11.84FNGVYY134 pKa = 10.33DD135 pKa = 3.71KK136 pKa = 11.25YY137 pKa = 11.27FKK139 pKa = 10.71IEE141 pKa = 4.05DD142 pKa = 3.72SVASVEE148 pKa = 4.12PVTPVVQKK156 pKa = 10.78EE157 pKa = 4.21VVTDD161 pKa = 3.66VEE163 pKa = 4.31KK164 pKa = 11.39SEE166 pKa = 4.1

Molecular weight: 18.89 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A186YBP6|A0A186YBP6_9VIRU Minor CP 2 OS=Chimpanzee faeces associated microphage 2 OX=1676182 PE=4 SV=1
MM1 pKa = 7.49RR2 pKa = 11.84LIYY5 pKa = 10.21RR6 pKa = 11.84LLASMPKK13 pKa = 9.89LHH15 pKa = 7.2SNRR18 pKa = 11.84QLLVRR23 pKa = 11.84RR24 pKa = 11.84LPCMQLIVLRR34 pKa = 11.84RR35 pKa = 11.84LPCMVLIRR43 pKa = 11.84LLLLLCMVLTRR54 pKa = 11.84LLKK57 pKa = 9.1LTRR60 pKa = 11.84RR61 pKa = 11.84RR62 pKa = 11.84LTGKK66 pKa = 10.13SFTLIILIRR75 pKa = 11.84LVLLCITRR83 pKa = 11.84VKK85 pKa = 10.62SQEE88 pKa = 3.91NLKK91 pKa = 10.61LLYY94 pKa = 9.27STLSIFLIGILAEE107 pKa = 4.29TKK109 pKa = 10.4KK110 pKa = 9.83MRR112 pKa = 11.84PLMRR116 pKa = 11.84AHH118 pKa = 7.31

Molecular weight: 13.92 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

5

0

5

1446

118

580

289.2

32.76

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

7.607 ± 1.946

0.899 ± 0.45

6.155 ± 0.798

5.256 ± 1.402

3.734 ± 0.508

5.187 ± 0.471

1.867 ± 0.288

5.256 ± 0.529

5.394 ± 1.342

8.368 ± 2.211

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.697 ± 0.435

6.708 ± 1.276

4.08 ± 0.793

3.942 ± 0.939

5.878 ± 1.083

8.299 ± 0.855

6.362 ± 0.669

5.809 ± 1.275

1.037 ± 0.258

5.463 ± 0.555
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski