Bovine papular stomatitis virus

Taxonomy: Viruses; Varidnaviria; Bamfordvirae; Nucleocytoviricota; Pokkesviricetes; Chitovirales; Poxviridae; Chordopoxvirinae; Parapoxvirus

Average proteome isoelectric point is 6.61

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 130 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|Q6TV73|Q6TV73_9POXV Uncharacterized protein OS=Bovine papular stomatitis virus OX=129727 GN=BVTX09c15_115 PE=4 SV=1
MM1 pKa = 7.17IHH3 pKa = 6.54FLLRR7 pKa = 11.84HH8 pKa = 5.51SLFLYY13 pKa = 9.06WFIEE17 pKa = 3.54PRR19 pKa = 11.84YY20 pKa = 8.76PHH22 pKa = 6.9TNTLGKK28 pKa = 9.65MSEE31 pKa = 4.34TAPSSSTTDD40 pKa = 3.02STSAGTSDD48 pKa = 4.73ASTSTNDD55 pKa = 3.02STAMSSAPTTDD66 pKa = 3.35ASSTSTTSNTSSATTSSSSDD86 pKa = 3.48TEE88 pKa = 4.45SSSTTANNADD98 pKa = 3.85SGSATTTTTTTEE110 pKa = 4.09STPTASTGSEE120 pKa = 4.12STSSATQPTTTDD132 pKa = 3.62PTPDD136 pKa = 4.16PAPVPATAPTASTGSEE152 pKa = 4.12STSSATQPTTTVPTTTDD169 pKa = 3.62PTPDD173 pKa = 4.2PAPAPAPAPAPAPAPMPNPVTTTTTTVSTTATNGTNRR210 pKa = 11.84CEE212 pKa = 4.26CVCTCTTTMTGGNQYY227 pKa = 10.27PPEE230 pKa = 5.36NIDD233 pKa = 3.9LGNSASTPSPPDD245 pKa = 3.23VEE247 pKa = 4.46EE248 pKa = 4.7PPAEE252 pKa = 4.04EE253 pKa = 4.41DD254 pKa = 3.68EE255 pKa = 4.44EE256 pKa = 4.97VII258 pKa = 5.15

Molecular weight: 25.93 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|Q6TVC0|Q6TVC0_9POXV Primase D5 OS=Bovine papular stomatitis virus OX=129727 GN=BVTX09c1_068 PE=3 SV=1
MM1 pKa = 7.95RR2 pKa = 11.84SYY4 pKa = 11.29TSLLSKK10 pKa = 10.13LVKK13 pKa = 10.32ANRR16 pKa = 11.84RR17 pKa = 11.84LGSTRR22 pKa = 11.84VFRR25 pKa = 11.84DD26 pKa = 3.33PLQHH30 pKa = 6.51ISATAFVYY38 pKa = 10.37RR39 pKa = 11.84RR40 pKa = 11.84IDD42 pKa = 3.14RR43 pKa = 11.84YY44 pKa = 10.64RR45 pKa = 11.84RR46 pKa = 11.84ISICAVLTTTDD57 pKa = 3.8GLVVACRR64 pKa = 11.84RR65 pKa = 11.84RR66 pKa = 11.84LSFLSTEE73 pKa = 4.01LAEE76 pKa = 4.29TRR78 pKa = 11.84SAARR82 pKa = 11.84RR83 pKa = 11.84VMLAARR89 pKa = 11.84HH90 pKa = 5.84ADD92 pKa = 3.11ALSRR96 pKa = 11.84IGASRR101 pKa = 11.84SRR103 pKa = 11.84DD104 pKa = 2.99DD105 pKa = 3.89VMFPGGAPLPGEE117 pKa = 4.23TFVDD121 pKa = 4.21CVTRR125 pKa = 11.84EE126 pKa = 4.05VEE128 pKa = 4.03EE129 pKa = 4.02EE130 pKa = 3.66TGIRR134 pKa = 11.84RR135 pKa = 11.84DD136 pKa = 3.26QMRR139 pKa = 11.84IDD141 pKa = 3.26EE142 pKa = 4.54RR143 pKa = 11.84MFVHH147 pKa = 7.21AFIDD151 pKa = 3.84DD152 pKa = 4.24LVTGRR157 pKa = 11.84DD158 pKa = 3.15FDD160 pKa = 5.78AIIFTGDD167 pKa = 3.3LRR169 pKa = 11.84LSSAEE174 pKa = 3.91VEE176 pKa = 4.3RR177 pKa = 11.84QFVPNGEE184 pKa = 4.37VKK186 pKa = 10.64GLLFLRR192 pKa = 11.84PTEE195 pKa = 4.21DD196 pKa = 2.74AGGVMARR203 pKa = 11.84LAAFARR209 pKa = 11.84AAARR213 pKa = 11.84MRR215 pKa = 11.84CWGSAATRR223 pKa = 3.58

Molecular weight: 24.99 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

130

0

130

42358

53

1289

325.8

36.27

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

9.736 ± 0.316

2.373 ± 0.125

6.233 ± 0.117

5.69 ± 0.123

4.445 ± 0.157

5.352 ± 0.147

2.297 ± 0.103

4.174 ± 0.168

3.631 ± 0.165

9.542 ± 0.202

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.883 ± 0.095

3.485 ± 0.14

4.776 ± 0.152

2.122 ± 0.095

8.006 ± 0.198

7.042 ± 0.208

5.645 ± 0.163

8.86 ± 0.171

0.67 ± 0.059

3.038 ± 0.116
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski