Alistipes dispar

Taxonomy: cellular organisms; Bacteria; FCB group; Bacteroidetes/Chlorobi group; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes

Average proteome isoelectric point is 6.41

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 2408 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A4Y1X0X4|A0A4Y1X0X4_9BACT Nudix hydrolase domain-containing protein OS=Alistipes dispar OX=2585119 GN=A5CPEGH6_05960 PE=4 SV=1
MM1 pKa = 8.02ALMLALPLFAAGCIIDD17 pKa = 4.88DD18 pKa = 4.58PEE20 pKa = 4.96PGPNLSGDD28 pKa = 3.06WTEE31 pKa = 4.33PEE33 pKa = 4.3EE34 pKa = 4.21PAGPEE39 pKa = 3.68TFITVDD45 pKa = 3.59GDD47 pKa = 3.61FSDD50 pKa = 3.99WDD52 pKa = 4.63AIPADD57 pKa = 4.16EE58 pKa = 5.21LVTATVPDD66 pKa = 3.99DD67 pKa = 3.62AFYY70 pKa = 11.16SAGRR74 pKa = 11.84RR75 pKa = 11.84LKK77 pKa = 10.15VYY79 pKa = 10.9AGATYY84 pKa = 10.37INIYY88 pKa = 10.3LEE90 pKa = 4.18YY91 pKa = 10.67SEE93 pKa = 6.13AEE95 pKa = 3.89QPVQIMHH102 pKa = 7.34LYY104 pKa = 10.05LDD106 pKa = 3.6SDD108 pKa = 3.8MAFDD112 pKa = 4.28GEE114 pKa = 4.43GRR116 pKa = 11.84PTTGMGNAAWTNDD129 pKa = 3.1GADD132 pKa = 3.2ILFEE136 pKa = 4.31GMLRR140 pKa = 11.84DD141 pKa = 3.86DD142 pKa = 4.04TGAPTAYY149 pKa = 10.26APTIFTWSGEE159 pKa = 4.05PLSGGWDD166 pKa = 3.07WTEE169 pKa = 3.54AVAAGAGICSNCEE182 pKa = 3.68PVEE185 pKa = 4.01LPNGNMAIEE194 pKa = 4.09MTIARR199 pKa = 11.84SAVPGLGQSFRR210 pKa = 11.84LGVGLQYY217 pKa = 11.21DD218 pKa = 4.01WNDD221 pKa = 2.95IAYY224 pKa = 9.3LPAGSAVEE232 pKa = 4.11EE233 pKa = 4.2NGEE236 pKa = 4.15PKK238 pKa = 10.45HH239 pKa = 6.05GAVEE243 pKa = 3.96NLLIGAKK250 pKa = 9.8SGPAPEE256 pKa = 4.23VLITADD262 pKa = 3.88GDD264 pKa = 3.67FSDD267 pKa = 4.15WEE269 pKa = 4.26KK270 pKa = 11.24VPASEE275 pKa = 4.2MTVATVPDD283 pKa = 3.73DD284 pKa = 4.08AYY286 pKa = 11.38YY287 pKa = 10.94KK288 pKa = 10.07AGKK291 pKa = 8.12VAKK294 pKa = 9.53VYY296 pKa = 10.86AGEE299 pKa = 4.41TYY301 pKa = 10.06VNFYY305 pKa = 11.11VEE307 pKa = 4.63YY308 pKa = 9.51EE309 pKa = 4.28DD310 pKa = 5.45SAEE313 pKa = 3.95QPVQIMHH320 pKa = 7.34LYY322 pKa = 10.05LDD324 pKa = 3.6SDD326 pKa = 3.8MAFDD330 pKa = 4.28GEE332 pKa = 4.43GRR334 pKa = 11.84PTTGMGNAAWTNDD347 pKa = 3.1GADD350 pKa = 3.16ILFEE354 pKa = 4.16GMVVDD359 pKa = 5.62DD360 pKa = 5.21AGAPAAYY367 pKa = 10.01DD368 pKa = 3.32PTIFNWTGEE377 pKa = 4.2NLSGGWDD384 pKa = 3.31WTEE387 pKa = 3.66LLAAGSGVCSASKK400 pKa = 10.14PVEE403 pKa = 3.93LEE405 pKa = 3.72NGRR408 pKa = 11.84KK409 pKa = 8.86AVEE412 pKa = 4.2VVVVRR417 pKa = 11.84SSIPNLGSRR426 pKa = 11.84FRR428 pKa = 11.84VGIGLQYY435 pKa = 11.01DD436 pKa = 3.83WNDD439 pKa = 2.76IAYY442 pKa = 8.67IPAGSAVEE450 pKa = 3.99EE451 pKa = 4.31NGVVGHH457 pKa = 6.15GAVEE461 pKa = 3.94NMLVGRR467 pKa = 4.74

Molecular weight: 49.71 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A4Y1X0M4|A0A4Y1X0M4_9BACT Uncharacterized protein OS=Alistipes dispar OX=2585119 GN=A5CPEGH6_04860 PE=4 SV=1
MM1 pKa = 7.32TARR4 pKa = 11.84CGGVGRR10 pKa = 11.84TLRR13 pKa = 11.84RR14 pKa = 11.84AAARR18 pKa = 11.84LLLVSLAALAAAACGRR34 pKa = 11.84TEE36 pKa = 3.92PEE38 pKa = 3.76AVRR41 pKa = 11.84VEE43 pKa = 3.81AVEE46 pKa = 3.94RR47 pKa = 11.84FEE49 pKa = 4.78RR50 pKa = 11.84LGSAGADD57 pKa = 2.62AVLRR61 pKa = 11.84VHH63 pKa = 6.69NGTGHH68 pKa = 5.0TLKK71 pKa = 10.2IRR73 pKa = 11.84RR74 pKa = 11.84VRR76 pKa = 11.84LDD78 pKa = 2.83VFYY81 pKa = 10.86AGKK84 pKa = 10.33RR85 pKa = 11.84VGTLRR90 pKa = 11.84LHH92 pKa = 5.93EE93 pKa = 4.23PVRR96 pKa = 11.84IPRR99 pKa = 11.84RR100 pKa = 11.84ATTLVGTRR108 pKa = 11.84WRR110 pKa = 11.84LEE112 pKa = 3.93TSDD115 pKa = 3.73PMAFYY120 pKa = 10.72VVEE123 pKa = 4.08RR124 pKa = 11.84RR125 pKa = 11.84LGEE128 pKa = 4.2GDD130 pKa = 3.7LSRR133 pKa = 11.84IGLSYY138 pKa = 10.41EE139 pKa = 3.48LRR141 pKa = 11.84ARR143 pKa = 11.84SGVVPVKK150 pKa = 10.44ISGDD154 pKa = 3.56MMPLSEE160 pKa = 4.67FLNTFGLSEE169 pKa = 4.77DD170 pKa = 4.97DD171 pKa = 3.03IKK173 pKa = 11.4EE174 pKa = 4.01YY175 pKa = 11.2LKK177 pKa = 11.14

Molecular weight: 19.53 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

2408

0

2408

882180

41

2498

366.4

40.79

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

9.709 ± 0.065

1.274 ± 0.018

5.782 ± 0.033

6.795 ± 0.047

4.231 ± 0.03

8.017 ± 0.039

1.71 ± 0.02

5.33 ± 0.045

4.119 ± 0.05

9.063 ± 0.049

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.452 ± 0.023

3.566 ± 0.041

4.343 ± 0.033

2.735 ± 0.026

7.316 ± 0.064

5.584 ± 0.041

5.597 ± 0.041

7.066 ± 0.042

1.328 ± 0.023

3.982 ± 0.039
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski