Acidibacillus sulfuroxidans

Taxonomy: cellular organisms; Bacteria; Terrabacteria group; Firmicutes; Bacilli; Bacillales; Bacillales incertae sedis; Acidibacillus

Average proteome isoelectric point is 6.55

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 2818 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A2U3D7Q1|A0A2U3D7Q1_9BACL DksA C4-type domain-containing protein OS=Acidibacillus sulfuroxidans OX=1765684 GN=BM613_08935 PE=4 SV=1
MM1 pKa = 7.75SINLLQQLNSIPNLGGTGLPVQQYY25 pKa = 10.09ASEE28 pKa = 4.11MQQVLTAQFEE38 pKa = 4.74TIPNSEE44 pKa = 4.85LSTLSTTQNALNSLQPALQQLQSATQTLASSLSWNAVHH82 pKa = 7.06LTTTGSGFTATAQAGAEE99 pKa = 4.03PSSYY103 pKa = 10.16TIQVNNLATAQWNTASVSLATSTGSSTLTAGTFAITPSSTSQLTGTATITVTSGEE158 pKa = 4.36SLSDD162 pKa = 2.8IAAAVNQDD170 pKa = 3.2SAATGVVASIIQSNNGYY187 pKa = 9.3QLTFQDD193 pKa = 4.36VNPGATNTFSLTDD206 pKa = 3.14VSGNVISSQLKK217 pKa = 7.43VTQTATATDD226 pKa = 3.56ASITLDD232 pKa = 2.94GSMTLTSSSDD242 pKa = 3.14TFANAIPNVTINVNQAGASGTILLAQDD269 pKa = 3.6SSAALSAVQNWMNAYY284 pKa = 10.13NSVISTLHH292 pKa = 6.41TDD294 pKa = 3.45TAYY297 pKa = 9.88TPASASNPAAGAQTGPLFTDD317 pKa = 4.56PAATGLLAQLPNSVNSFIGASGATGSSNFYY347 pKa = 10.58HH348 pKa = 6.92SLSQLGIVVDD358 pKa = 4.26PNTGQLEE365 pKa = 4.26FQSASGFAANPASGTAGFSGTLQSGQAMFTHH396 pKa = 7.32AVQSNLAAVQQLFGVVQTSSLSSEE420 pKa = 4.26VPTNGILGNLNTVLNEE436 pKa = 3.81FLGSGSSTGVISGEE450 pKa = 4.03LQSISQQQKK459 pKa = 10.33EE460 pKa = 4.01INQYY464 pKa = 10.35LKK466 pKa = 10.47QVNQMITNNVQNFTSQLNNLNASLQQSSAQMQQINAMLNGASSSSSSSSSNSSGGG521 pKa = 3.3

Molecular weight: 52.98 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A2U3D6C3|A0A2U3D6C3_9BACL Uncharacterized protein OS=Acidibacillus sulfuroxidans OX=1765684 GN=BM613_11805 PE=4 SV=1
MM1 pKa = 7.61KK2 pKa = 8.75PTFNPNVRR10 pKa = 11.84RR11 pKa = 11.84RR12 pKa = 11.84KK13 pKa = 8.86KK14 pKa = 9.56VHH16 pKa = 5.96GFRR19 pKa = 11.84QRR21 pKa = 11.84MSTKK25 pKa = 9.43NGRR28 pKa = 11.84RR29 pKa = 11.84VLAARR34 pKa = 11.84RR35 pKa = 11.84RR36 pKa = 11.84KK37 pKa = 8.78GRR39 pKa = 11.84RR40 pKa = 11.84VISAA44 pKa = 3.77

Molecular weight: 5.28 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

2818

0

2818

825953

26

1525

293.1

32.59

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

9.139 ± 0.053

0.757 ± 0.014

4.732 ± 0.035

6.36 ± 0.05

4.129 ± 0.04

7.176 ± 0.047

2.536 ± 0.024

6.4 ± 0.036

4.263 ± 0.037

10.57 ± 0.058

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.591 ± 0.019

3.064 ± 0.037

4.222 ± 0.03

4.492 ± 0.033

5.913 ± 0.05

5.884 ± 0.037

5.615 ± 0.03

7.859 ± 0.036

1.208 ± 0.021

3.09 ± 0.027
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski